Conductance through short DNA molecules

Journal of Physical Chemistry C

Volumn 115, Issue 8, 2011, Pages 3481-3490

  Staykov, Aleksandar ^a   Tsuji, Yuta ^a   Yoshizawa, Kazunari ^a  

^a KYUSHU UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE-THYMINE; APPLIED BIAS; CONDUCTIVE PROPERTIES; DNA MOLECULES; ELECTRON TRANSPORT; EXPERIMENTAL OBSERVATION; GOLD ELECTRODES; HETEROCYCLIC BASIS; METAL-MOLECULE-METAL JUNCTIONS; NON EQUILIBRIUM GREEN'S FUNCTION METHOD; NUCLEOTIDE PAIRS; POTENTIAL BARRIERS; SELF-CONSISTENT FIELD CALCULATIONS; THEORETICAL STUDY; TRANSMISSION PROBABILITIES; TUNNELING MECHANISM; WEAK INTERACTIONS;

DENSITY FUNCTIONAL THEORY; DNA; ELECTRODES; ELECTRON TRANSITIONS; ELECTRON TRANSPORT PROPERTIES; MOLECULES; NUCLEIC ACIDS; NUCLEOTIDES;

DNA SEQUENCES;

EID: 79952034732     PISSN: 19327447     EISSN: 19327455     Source Type: Journal    
DOI: 10.1021/jp110803a     Document Type: Article

References (54)

1. Kasumov, A. Y.; Kociak, M.; Guéron, S.; Reulet, B.; Volkov, V. T.; Klinov, D. V.; Bouchiat, H. Science 2001, 291, 280
2. Dulić, D.; Tuukkanen, S.; Chung, C. L.; Isambert, A.; Lavie, P.; Filoramo, A. Nanotechnology 2009, 20, 115502
3. Okahata, Y.; Kobayashi, T.; Tanaka, K.; Shimomura, M. J. Am. Chem. Soc. 1998, 120, 6165
4. Porath, D.; Bezryadin, A.; de Vries, S.; Dekker, C. Nature 2000, 403, 635
5. Yoo, K. H.; Ha, D. H.; Lee, J. O.; Park, J. W.; Kim, J.; Kim, J. J.; Lee, H. Y.; Kawai, T.; Choi, H. Y. Phys. Rev. Lett. 2001, 87, 198102
6. Fink, H.-W.; Schönenberger, C. Nature 1999, 398, 407
7. Giese, B.; Amaudrut, J.; Köhler, A.-K.; Spormann, M.; Wessely, S. Nature 2001, 412, 318
8. Asai, Y. J. Phys. Chem. B 2003, 107, 4647
9. Klotsa, D.; Römer, R. A.; Turner, M. S. Biophys. J. 2005, 89, 2187
10. Volobuyev, M.; Adamowicz, L. J. Phys. Chem. B 2005, 109, 1048
11. Tada, T.; Kondo, M.; Yoshizawa, K. ChemPhysChem 2003, 4, 1256
12. Senthilkumar, K.; Grozema, F. C.; Guerra, C. F.; Bickelhaupt, F. M.; Lewis, F. D.; Berlin, Y. A.; Ratner, M. A.; Siebbeles, L. D. A. J. Am. Chem. Soc. 2005, 127, 14894
13. de Pablo, P. J.; Moreno-Herrero, F.; Colchero, J.; Gómez Herrero, J.; Herrero, P.; Baró, A. M.; Ordejón, P.; Soler, J. M.; Artacho, E. Phys. Rev. Lett. 2000, 85, 4992
14. Storm, A. J.; van Noort, J.; de Vries, S.; Dekker, C. Appl. Phys. Lett. 2001, 79, 3881
15. Zhang, Y.; Austin, R. H.; Kraeft, J.; Cox, E. C.; Ong, N. P. Phys. Rev. Lett. 2002, 89, 198102
16. Reed, M. A.; Zhou, C.; Muller, C. J.; Burgin, T. P.; Tour, J. M. Science 1997, 278, 252
17. Datta, S. Electronic Transport in Mesoscopic Systems; Cambridge University Press: Cambridge, 1995.
18. Bauschlicher, C. W.; Ricca, A. Chem. Phys. Lett. 2003, 367, 90
19. Grönbeck, H.; Curioni, A.; Andreoni, W. J. Am. Chem. Soc. 2000, 122, 3839
20. Nara, J.; Higai, S. i.; Morikawa, Y.; Ohno, T. J. Chem. Phys. 2004, 120, 6705
21. Tachibana, M.; Yoshizawa, K.; Ogawa, A.; Fujimoto, H.; Hoffmann, R. J. Phys. Chem. B 2002, 106, 12727
22. Hoffmann, R. J. Chem. Phys. 1963, 39, 1397
23. Shapir, E.; Sagiv, L.; Borovok, N.; Molotski, T.; Kotlyar, A. B.; Porath, D. J. Phys. Chem. B 2008, 112, 9267
24. Brandbyge, M.; Mozos, J. L.; Ordejón, P.; Taylor, J.; Stokbro, K. Phys. Rev. B 2002, 65, 165401
25. Saito, I.; Takayama, M.; Sugiyama, H.; Nakatani, K.; Tsuchida, A.; Yamamoto, M. J. Am. Chem. Soc. 1995, 117, 6406
26. Drummond, T. G.; Hill, M. G.; Barton, J. K. Nat. Biotechnol. 2003, 21, 1192
27. Heeger, A. J. Rev. Mod. Phys. 2001, 73, 681
28. Tyutyulkov, N.; Ivanov, N.; Müllen, K.; Staykov, A.; Dietz, F. J. Phys. Chem. B 2004, 108, 4275
29. Carroll, R. L.; Gorman, C. B. Angew. Chem., Int. Ed. 2002, 41, 4379
30. Stokbro, K. J. Phys. Condens. Matter 2008, 20, 64216
31. Landauer, R. IBM J. Res. Dev. 1957, 1, 223
32. Stokbro, K.; Taylor, J.; Brandbyge, M.; Mozos, J. L.; Ordejón, P. Comput. Mater. Sci. 2003, 27, 151
33. Tada, T.; Yoshizawa, K. ChemPhysChem 2002, 3, 1035
34. Yoshizawa, K.; Tada, T.; Staykov, A. J. Am. Chem. Soc. 2008, 130, 9406
35. Lee, C.; Yang, W. T.; Parr, R. G. Phys. Rev. B 1988, 37, 785
36. Becke, A. D. J. Chem. Phys. 1993, 98, 5648
37. Vosko, S. H.; Wilk, L.; Nusair, M. Can. J. Phys. 1980, 58, 1200
38. Krishnan, R.; Binkley, J. S.; Seeger, R.; Pople, J. A. J. Chem. Phys. 1980, 72, 650
39. Dkhissi, A.; Blossey, R. Chem. Phys. Lett. 2007, 439, 35
40. Frisch, M. Gaussian 03, revision B.03; Gaussian, Inc.: Wallingford, CT, 2004.
41. ATK, Version 2008.10, quantumwise; www.quantumwise.com, 2008.
42. Perdew, J. P.; Zunger, A. Phys. Rev. B 1981, 23, 5048
43. Müllen, K.; Rabe, J. P. Acc. Chem. Res. 2008, 41, 511
44. Tsuji, Y.; Staykov, A.; Yoshizawa, K. Thin Solid Films 2009, 518, 444
45. Tsuji, Y.; Staykov, A.; Yoshizawa, K. J. Phys. Chem. C 2009, 113, 21477
46. Staykov, A.; Nozaki, D.; Yoshizawa, K. J. Phys. Chem. C 2007, 111, 11699
47. Stokbro, K.; Taylor, J.; Brandbyge, M. J. Am. Chem. Soc. 2003, 125, 3674
48. Taylor, J.; Brandbyge, M.; Stokbro, K. Phys. Rev. Lett. 2002, 89, 138301
49. Yin, X.; Li, Y.; Zhang, Y.; Li, P.; Zhao, J. Chem. Phys. Lett. 2006, 422, 111
50. Li, Y.; Zhao, J.; Yin, X.; Yin, G. J. Phys. Chem. A 2006, 110, 11130
51. Metzger, R. M. Chem. Rev. 2003, 103, 3803
52. Cristancho, D.; Seminario, J. J. Chem. Phys. 2010, 132, 065102
53. Tsukamoto, T.; Ishikawa, Y.; Sengoku, Y.; Kurita, N. Chem. Phys. Lett. 2009, 474, 362
54. Řeha, D.; Voityuk, A. A.; Harris, S. A. ACS Nano 2010, 4, 5737