No population genetic structure in a widespread aquatic songbird from the Neotropics

Molecular Phylogenetics and Evolution

Volumn 58, Issue 3, 2011, Pages 540-545

  Cadena, Carlos Daniel ^a   Gutiérrez Pinto, Natalia ^a   Dávila, Nicolás ^a   Terry Chesser, R ^b  

^a UNIVERSIDAD DE LOS ANDES   (Colombia)

^b DEPARTMENT OF PALEOBIOLOGY   (United States)

Author keywords

Amazonia; Andes; Chrysomus icterocephalus; Icteridae; Phylogeography; Yellow hooded Blackbird

Indexed keywords

MITOCHONDRIAL DNA;

ANIMAL; ARTICLE; DNA SEQUENCE; GENE FLOW; GENETIC VARIABILITY; GENETICS; HAPLOTYPE; PHYLOGEOGRAPHY; POPULATION GENETICS; SONGBIRD; SOUTH AMERICA;

ANIMALS; DNA, MITOCHONDRIAL; GENE FLOW; GENETIC VARIATION; GENETICS, POPULATION; HAPLOTYPES; PHYLOGEOGRAPHY; SEQUENCE ANALYSIS, DNA; SONGBIRDS; SOUTH AMERICA;

ICTERIDAE; PASSERI; TURDUS MERULA;

EID: 79951958238     PISSN: 10557903     EISSN: 10959513     Source Type: Journal    
DOI: 10.1016/j.ympev.2010.12.014     Document Type: Article

References (33)

1. Aleixo A. Historical diversification of a terra-firme forest bird superspecies: a phylogeographic perspective on the role of different hypotheses of Amazonian diversification. Evolution 2004, 58:1303-1317.
2. Aleixo A. Historical diversification of floodplain forest specialist species in the Amazon: a case study with two species of the avian genus Xiphorhynchus (Aves: Dendrocolaptidae). Biol. J. Linn. Soc. 2006, 89:383-395.
3. Aleixo A., Rossetti D.F. Avian gene trees, landscape evolution, and geology: towards a modern synthesis of Amazonian historical biogeography?. J. Ornithol. 2007, 148:S443-453.
4. Antonelli A., Quijada-Mascareñas A., Crawford A.J., Bates J.M., Velazco P.M., Wüster W. Molecular studies and phylogeography of Amazonian tetrapods and their relation to geological and climatic models. Amazonia, Landscape and Species Evolution: A Look into the Past 2010, 386-404. Wiley-Blackwell. C. Hoorn, F.P. Wesselingh (Eds.).
5. Ballentine B., Greenberg R. Common garden experiment reveals genetic control of phenotypic divergence between swamp sparrow subspecies that lack divergence in neutral genotypes. PLoS One 2010, 5:e10229.
6. Bandelt H.-J., Forster P., Rohl A. Median-joining networks for inferring intraspecific phylogenies. Mol. Biol. Evol. 1999, 16:37-48.
7. Bates J.M., Tello J.G., Silva J.M.C. Initial assessment of genetic diversity in ten bird species of South American Cerrado. Stud. Neotrop. Fauna Envir. 2003, 38:87-94.
8. Burney C.W., Brumfield R.T. Ecology predicts levels of genetic differentiation in Neotropical birds. Am. Nat. 2009, 174:358-368.
9. Cadena C.D., Klicka J., Ricklefs R.E. Evolutionary differentiation in the Neotropical montane region: molecular phylogenetics and phylogeography of Buarremon brush-finches (Aves, Emberizidae). Mol. Phylogenet. Evol. 2007, 44:993-1016.
10. Capparella A.P. Genetic variation in Neotropical birds: implications for the speciation process. Acta XIX Acta Congr. Int. Ornithol. 1988, 2:1658-1664.
11. Carstens B.C., Brunsfeld S.J., Demboski J.R., Good J.M., Sullivan J. Investigating the evolutionary history of the Pacific Northwest mesic forest ecosystem: hypothesis testing within a comparative phylogeographic framework. Evolution 2005, 59:1639-1652.
12. Chapman F.M. Diagnoses of apparently new Colombian birds, II. Bull. Amer. Mus. Nat. Hist. 1914, 33:167-192.
13. Drummond A.J., Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 2007, 7:214.
14. Excoffier L., Laval G., Schneider S. Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evol. Bioinform. Online 2005, 1:47-50.
15. Fjeldså J. Origin, evolution, and status of the avifauna of Andean wetlands. Ornithol. Monogr. 1985, 36:85-112.
16. Haffer J. Speciation in Amazonian forest birds. Science 1969, 165:131-137.
17. Hoorn C., Wesselingh F.P., ter Steege H., Bermudez M.A., Mora A., Sevink J., Sanmartín I., Sanchez-Meseguer A., Anderson C.L., Figueiredo J.P., Jaramillo C., Riff D., Negri F.R., Hooghiemstra H., Lundberg J., Stadler T., Särkinen T., Antonelli A. Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity. Science 2010, 330:927-931.
18. Jaramillo A., Burke P. New World Blackbirds: The Icterids 1999, Princeton University Press, Princeton.
19. Johnson K.P., Lanyon S.M. Molecular systematics of the grackles and allies, and the effect of additional sequence (Cyt B and ND2). Auk 1999, 116:759-768.
20. Librado P., Rozas J. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 2009, 25:1451-1452.
21. Minin V.N., Bloomquist E.W., Suchard M.A. Smooth skyride through a rough skyline: Bayesian coalescent-based inference of population dynamics. Mol. Biol. Evol. 2008, 25:1459-1471.
22. Moore R.P., Robinson W.D., Lovette I.J., Robinson T.R. Experimental evidence for extreme dispersal limitation in tropical forest birds. Ecol. Let. 2008, 11:960-968.
23. Moritz C., Patton J.L., Schneider C.J., Smith T.B. Diversification of rainforest faunas: an integrated molecular approach. Ann. Rev. Ecol. Syst. 2000, 31:533-563.
24. Naranjo L.G. Patrones de reproducción en dos poblaciones aisladas de Agelaius icterocephalus (Aves: Icteridae). Caldasia 1995, 18:89-100.
25. Nylander J.A.A. MrModeltest v2. Program distributed by the author 2004, Evolutionary Biology Centre, Uppsala University, Uppsala.
26. Pérez-Emán J.L., Mumme R.L., Jablonski P.G. Phylogeography and adaptive plumage evolution in Central American subspecies of the slate-throated redstart (Myioborus miniatus). Ornithol. Monogr. 2010, 67:90-102.
27. Pruett C.L., Winker K. Alaska song sparrows (Melospiza melodia) demonstrate that genetic marker and method of analysis matter in subspecies assessments. Ornithol. Monogr. 2010, 67:160-169.
28. Remsen J.V., Parker T.A.I. Contribution of river-created habitats to bird species richness in Amazonia. Biotropica 1983, 15:223-231.
29. Torres V., Vandenberghe J., Hooghiemstra H. An environmental reconstruction of the sediment infill of the Bogotá basin (Colombia) during the last 3 million years from abiotic and biotic proxies. Palaeogeogr., Palaeoclimatol., Palaeoecol. 2005, 226:127-148.
30. Voous K.H. Additions to the avifauna of Aruba, Curacao, and Bonaire, south Caribbean. Ornithol. Monogr. 1985, 36:247-254.
31. Weir J.T., Schluter D. Calibrating the avian molecular clock. Mol. Ecol. 2008, 17:2321-2328.
32. Wiley R.H., Wiley M.S. Spacing and timing in the nesting ecology of a tropical blackbird: comparison of populations in different environments. Ecol. Monogr. 1980, 50:153-178.
33. Zink R.M. The role of subspecies in obscuring avian biological diversity and misleading conservation policy. Proc. Roy. Soc. Lond. B 2004, 271:561-564.