-
1
-
-
0019826665
-
Establishment in culture of pluripotential cells from mouse embryos
-
DOI 10.1038/292154a0
-
Evans MJ, Kaufman MH. Establishment in culture of pluripotential cells from mouse (Pubitemid 11050741)
-
(1981)
Nature
, vol.292
, Issue.5819
, pp. 154-156
-
-
Evans, M.J.1
Kaufman, M.H.2
-
2
-
-
0001007610
-
Isolation of a pluripotent cell line from early mouse embryos cultured in medium conditioned by teratocarcinoma stem cells
-
Martin GR. Isolation of a pluripotent cell line from early mouse embryos cultured in medium conditioned by teratocarcinoma stem cells. Proc. Natl Acad. Sci. USA 78(12), 7634-7638 (1981). (Pubitemid 12186197)
-
(1981)
Proceedings of the National Academy of Sciences of the United States of America
, vol.78
, Issue.12
, pp. 7634-7638
-
-
Martin, G.R.1
-
3
-
-
0032491416
-
Embryonic stem cell lines derived from human blastocysts
-
Thomson JA, Itskovitz-Eldor J, Shapiro SS et al. Embryonic stem cell lines derived from human blastocysts. Science 282(5391), 1145-1147 (1998). (Pubitemid 28516247)
-
(1998)
Science
, vol.282
, Issue.5391
, pp. 1145-1147
-
-
Thomson, J.A.1
-
4
-
-
48749109823
-
Pluripotent stem cell lines
-
Yu J, Thomson JA. Pluripotent stem cell lines. Genes Dev. 22(15), 1987-1997 (2008).
-
(2008)
Genes Dev.
, vol.22
, Issue.15
, pp. 1987-1997
-
-
Yu, J.1
Thomson, J.A.2
-
5
-
-
77953365784
-
Extrinsic regulation of pluripotent stem cells
-
Pera MF, Tam PP. Extrinsic regulation of pluripotent stem cells. Nature 465(7299), 713-720 (2010).
-
(2010)
Nature
, vol.465
, Issue.7299
, pp. 713-720
-
-
Pera, M.F.1
Tam, P.P.2
-
6
-
-
39149130361
-
Stem cells, the molecular circuitry of pluripotency and nuclear reprogramming
-
DOI 10.1016/j.cell.2008.01.015, PII S0092867408001153
-
Jaenisch R, Young R. Stem cells, the molecular circuitry of pluripotency and nuclear reprogramming. Cell 132(4), 567-582 (2008). (Pubitemid 351253686)
-
(2008)
Cell
, vol.132
, Issue.4
, pp. 567-582
-
-
Jaenisch, R.1
Young, R.2
-
7
-
-
33846044682
-
Derivation of human embryonic stem cells from developing and arrested embryos
-
DOI 10.1634/stemcells.2006-0377
-
Zhang X, Stojkovic P, Przyborski S et al. Derivation of human embryonic stem cells from developing and arrested embryos. Stem Cells 24(12), 2669-2676 (2006). (Pubitemid 46070118)
-
(2006)
Stem Cells
, vol.24
, Issue.12
, pp. 2669-2676
-
-
Zhang, X.1
Stojkovic, P.2
Przyborski, S.3
Cooke, M.4
Armstrong, L.5
Lako, M.6
Stojkovic, M.7
-
8
-
-
33846581017
-
Histocompatible embryonic stem cells by parthenogenesis
-
DOI 10.1126/science.1133542
-
Kim K, Lerou P, Yabuuchi A et al. Histocompatible embryonic stem cells by parthenogenesis. Science 315(5811), 482-486 (2007). (Pubitemid 46178390)
-
(2007)
Science
, vol.315
, Issue.5811
, pp. 482-486
-
-
Kim, K.1
Lerou, P.2
Yabuuchi, A.3
Lengerke, C.4
Ng, K.5
West, J.6
Kirby, A.7
Daly, M.J.8
Daley, G.Q.9
-
9
-
-
30544453798
-
Embryonic and extraembryonic stem cell lines derived from single mouse blastomeres
-
DOI 10.1038/nature04277, PII NATURE04277
-
Chung Y, Klimanskaya I, Becker S et al. Embryonic and extraembryonic stem cell lines derived from single mouse blastomeres. Nature 439(7073), 216-219 (2006). (Pubitemid 43083144)
-
(2006)
Nature
, vol.439
, Issue.7073
, pp. 216-219
-
-
Chung, Y.1
Klimanskaya, I.2
Becker, S.3
Marh, J.4
Lu, S.-J.5
Johnson, J.6
Meisner, L.7
Lanza, R.8
-
10
-
-
34447527158
-
Derivation of pluripotent epiblast stem cells from mammalian embryos
-
DOI 10.1038/nature05950, PII NATURE05950
-
Brons IG, Smithers LE, Trotter MW et al. Derivation of pluripotent epiblast stem cells from mammalian embryos. Nature 448(7150), 191-195 (2007). (Pubitemid 47067373)
-
(2007)
Nature
, vol.448
, Issue.7150
, pp. 191-195
-
-
Brons, I.G.M.1
Smithers, L.E.2
Trotter, M.W.B.3
Rugg-Gunn, P.4
Sun, B.5
Chuva De Sousa Lopes, S.M.6
Howlett, S.K.7
Clarkson, A.8
Ahrlund-Richter, L.9
Pedersen, R.A.10
Vallier, L.11
-
11
-
-
34447528757
-
New cell lines from mouse epiblast share defining features with human embryonic stem cells
-
DOI 10.1038/nature05972, PII NATURE05972
-
Tesar PJ, Chenoweth JG, Brook FA et al. New cell lines from mouse epiblast share defining features with human embryonic stem cells. Nature 448(7150), 196-199 (2007). (Pubitemid 47067378)
-
(2007)
Nature
, vol.448
, Issue.7150
, pp. 196-199
-
-
Tesar, P.J.1
Chenoweth, J.G.2
Brook, F.A.3
Davies, T.J.4
Evans, E.P.5
Mack, D.L.6
Gardner, R.L.7
McKay, R.D.G.8
-
12
-
-
36549033276
-
Producing primate embryonic stem cells by somatic cell nuclear transfer
-
DOI 10.1038/nature06357
-
Byrne JA, Pedersen DA, Clepper LL et al. Producing primate embryonic stem cells by somatic cell nuclear transfer. Nature 450(7169), 497-502 (2007). (Pubitemid 350190255)
-
(2007)
Nature
, vol.450
, Issue.7169
, pp. 497-502
-
-
Byrne, J.A.1
Pedersen, D.A.2
Clepper, L.L.3
Nelson, M.4
Sanger, W.G.5
Gokhale, S.6
Wolf, D.P.7
Mitalipov, S.M.8
-
13
-
-
0242584518
-
Molecular correlates of primate nuclear transfer failures
-
DOI 10.1126/science.1082091
-
Simerly C, Dominko T, Navara C et al. Molecular correlates of primate nuclear transfer failures. Science 300(5617), 297 (2003). (Pubitemid 36433715)
-
(2003)
Science
, vol.300
, Issue.5617
, pp. 297
-
-
Simerly, C.1
Dominko, T.2
Navara, C.3
Payne, C.4
Capuano, S.5
Gosman, G.6
Chong, K.-Y.7
Takahashi, D.8
Chace, C.9
Compton, D.10
Hewitson, L.11
Schatten, G.12
-
14
-
-
33747195353
-
Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors
-
DOI 10.1016/j.cell.2006.07.024, PII S0092867406009767
-
Takahashi K, Yamanaka S. Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors. Cell 126(4), 663-676 (2006). (Pubitemid 44233629)
-
(2006)
Cell
, vol.126
, Issue.4
, pp. 663-676
-
-
Takahashi, K.1
Yamanaka, S.2
-
15
-
-
35148845584
-
Direct reprogramming of genetically unmodified fibroblasts into pluripotent stem cells
-
DOI 10.1038/nbt1335, PII NBT1335
-
Meissner A, Wernig M, Jaenisch R. Direct reprogramming of genetically unmodified fibroblasts into pluripotent stem cells. Nat. Biotechnol. 25(10), 1177-1181 (2007). (Pubitemid 47538112)
-
(2007)
Nature Biotechnology
, vol.25
, Issue.10
, pp. 1177-1181
-
-
Meissner, A.1
Wernig, M.2
Jaenisch, R.3
-
16
-
-
34249880066
-
Generation of germline-competent induced pluripotent stem cells
-
DOI 10.1038/nature05934, PII NATURE05934
-
Okita K, Ichisaka T, Yamanaka S. Generation of germline-competent induced pluripotent stem cells. Nature 448(7151), 313-317 (2007). (Pubitemid 47080336)
-
(2007)
Nature
, vol.448
, Issue.7151
, pp. 313-317
-
-
Okita, K.1
Ichisaka, T.2
Yamanaka, S.3
-
17
-
-
38049028459
-
Generation of induced pluripotent stem cells without Myc from mouse and human fibroblasts
-
Nakagawa M, Koyanagi M, Tanabe K et al. Generation of induced pluripotent stem cells without Myc from mouse and human fibroblasts. Nat. Biotechnol. 26(1), 101-106 (2008).
-
(2008)
Nat. Biotechnol.
, vol.26
, Issue.1
, pp. 101-106
-
-
Nakagawa, M.1
Koyanagi, M.2
Tanabe, K.3
-
18
-
-
34249909232
-
Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution
-
Maherali N, Sridharan R, Xie W et al. Directly reprogrammed fibroblasts show global epigenetic remodeling and widespread tissue contribution. Cell Stem Cell 1(1), 55-70 (2007).
-
(2007)
Cell Stem Cell
, vol.1
, Issue.1
, pp. 55-70
-
-
Maherali, N.1
Sridharan, R.2
Xie, W.3
-
19
-
-
36248966518
-
Induction of pluripotent stem cells from adult human fibroblasts by defined factors
-
DOI 10.1016/j.cell.2007.11.019, PII S0092867407014717
-
Takahashi K, Tanabe K, Ohnuki M et al. Induction of pluripotent stem cells from adult human fibroblasts by defined factors. Cell 131(5), 861-872 (2007). (Pubitemid 350138099)
-
(2007)
Cell
, vol.131
, Issue.5
, pp. 861-872
-
-
Takahashi, K.1
Tanabe, K.2
Ohnuki, M.3
Narita, M.4
Ichisaka, T.5
Tomoda, K.6
Yamanaka, S.7
-
20
-
-
38049187707
-
Reprogramming of human somatic cells to pluripotency with defined factors
-
Park IH, Zhao R, West JA et al. Reprogramming of human somatic cells to pluripotency with defined factors. Nature 451(7175), 141-146 (2008).
-
(2008)
Nature
, vol.451
, Issue.7175
, pp. 141-146
-
-
Park, I.H.1
Zhao, R.2
West, J.A.3
-
21
-
-
41349090105
-
Generation of human induced pluripotent stem cells from dermal fibroblasts
-
DOI 10.1073/pnas.0711983105
-
Lowry WE, Richter L, Yachechko R et al. Generation of human induced pluripotent stem cells from dermal fibroblasts. Proc. Natl Acad. Sci. USA 105(8), 2883-2888 (2008). (Pubitemid 351723638)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.8
, pp. 2883-2888
-
-
Lowry, W.E.1
Richter, L.2
Yachechko, R.3
Pyle, A.D.4
Tchieu, J.5
Sridharan, R.6
Clark, A.T.7
Plath, K.8
-
22
-
-
36749043230
-
Induced pluripotent stem cell lines derived from human somatic cells
-
Yu JY, Vodyanik MA, Smuga-Otto K et al. Induced pluripotent stem cell lines derived from human somatic cells. Science 318(5858), 1917-1920 (2007).
-
(2007)
Science
, vol.318
, Issue.5858
, pp. 1917-1920
-
-
Yu, J.Y.1
Vodyanik, M.A.2
Smuga-Otto, K.3
-
23
-
-
61849086230
-
Generation of iPS cells using defined factors linked via the self-cleaving 2A sequences in a single open reading frame
-
Shao L, Feng W, Sun Y et al. Generation of iPS cells using defined factors linked via the self-cleaving 2A sequences in a single open reading frame. Cell Res. 19(3), 296-306 (2009).
-
(2009)
Cell Res.
, vol.19
, Issue.3
, pp. 296-306
-
-
Shao, L.1
Feng, W.2
Sun, Y.3
-
24
-
-
58549096370
-
Reprogramming of murine and human somatic cells using a single polycistronic vector
-
Carey BW, Markoulaki S, Hanna J et al. Reprogramming of murine and human somatic cells using a single polycistronic vector. Proc. Natl Acad. Sci. USA 106(1), 157-162 (2009).
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, Issue.1
, pp. 157-162
-
-
Carey, B.W.1
Markoulaki, S.2
Hanna, J.3
-
25
-
-
65249149666
-
Induced pluripotent stem cell generation using a single lentiviral stem cell cassette
-
Sommer CA, Stadtfeld M, Murphy GJ, Hochedlinger K, Kotton DN, Mostoslavsky G. Induced pluripotent stem cell generation using a single lentiviral stem cell cassette. Stem Cells 27(3), 543-549 (2009).
-
(2009)
Stem Cells
, vol.27
, Issue.3
, pp. 543-549
-
-
Sommer, C.A.1
Stadtfeld, M.2
Murphy, G.J.3
Hochedlinger, K.4
Kotton, D.N.5
Mostoslavsky, G.6
-
26
-
-
64749111225
-
Virus-free induction of pluripotency and subsequent excision of reprogramming factors
-
Kaji K, Norrby K, Paca A, Mileikovsky M, Mohseni P, Woltjen K. Virus-free induction of pluripotency and subsequent excision of reprogramming factors. Nature 458(7239), 771-775 (2009).
-
(2009)
Nature
, vol.458
, Issue.7239
, pp. 771-775
-
-
Kaji, K.1
Norrby, K.2
Paca, A.3
Mileikovsky, M.4
Mohseni, P.5
Woltjen, K.6
-
27
-
-
61349100729
-
Parkinsons disease patient-derived induced pluripotent stem cells free of viral reprogramming factors
-
Soldner F, Hockemeyer D, Beard C et al. Parkinsons disease patient-derived induced pluripotent stem cells free of viral reprogramming factors. Cell 136(5), 964-977 (2009).
-
(2009)
Cell
, vol.136
, Issue.5
, pp. 964-977
-
-
Soldner, F.1
Hockemeyer, D.2
Beard, C.3
-
28
-
-
64749083939
-
PiggyBac transposition reprograms fibroblasts to induced pluripotent stem cells
-
Woltjen K, Michael IP, Mohseni P et al. piggyBac transposition reprograms fibroblasts to induced pluripotent stem cells. Nature 458(7239), 766-770 (2009).
-
(2009)
Nature
, vol.458
, Issue.7239
, pp. 766-770
-
-
Woltjen, K.1
Michael, I.P.2
Mohseni, P.3
-
29
-
-
65449154892
-
Generation of transgene-free induced pluripotent mouse stem cells by the piggyBac transposon
-
Yusa K, Rad R, Takeda J, Bradley A. Generation of transgene-free induced pluripotent mouse stem cells by the piggyBac transposon. Nat. Methods 6(5), 363-369 (2009).
-
(2009)
Nat. Methods
, vol.6
, Issue.5
, pp. 363-369
-
-
Yusa, K.1
Rad, R.2
Takeda, J.3
Bradley, A.4
-
30
-
-
55849115999
-
Induced pluripotent stem cells generated without viral integration
-
Stadtfeld M, Nagaya M, Utikal J, Weir G, Hochedlinger K. Induced pluripotent stem cells generated without viral integration. Science 322(5903), 945-949 (2008).
-
(2008)
Science
, vol.322
, Issue.5903
, pp. 945-949
-
-
Stadtfeld, M.1
Nagaya, M.2
Utikal, J.3
Weir, G.4
Hochedlinger, K.5
-
31
-
-
55849117368
-
Generation of mouse induced pluripotent stem cells without viral vectors
-
Okita K, Nakagawa M, Hong HJ, Ichisaka T, Yamanaka S. Generation of mouse induced pluripotent stem cells without viral vectors. Science 322(5903), 949-953 (2008).
-
(2008)
Science
, vol.322
, Issue.5903
, pp. 949-953
-
-
Okita, K.1
Nakagawa, M.2
Hong, H.J.3
Ichisaka, T.4
Yamanaka, S.5
-
32
-
-
67049155513
-
Generation of mouse-induced pluripotent stem cells by transient expression of a single nonviral polycistronic vector
-
Gonzalez F, Barragan Monasterio M, Tiscornia G et al. Generation of mouse-induced pluripotent stem cells by transient expression of a single nonviral polycistronic vector. Proc. Natl Acad. Sci. USA 106(22), 8918-8922 (2009).
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, Issue.22
, pp. 8918-8922
-
-
Gonzalez, F.1
Barragan Monasterio, M.2
Tiscornia, G.3
-
33
-
-
65649116572
-
Human induced pluripotent stem cells free of vector and transgene sequences
-
Yu J, Hu K, Smuga-Otto K et al. Human induced pluripotent stem cells free of vector and transgene sequences. Science 324(5928), 797-801 (2009).
-
(2009)
Science
, vol.324
, Issue.5928
, pp. 797-801
-
-
Yu, J.1
Hu, K.2
Smuga-Otto, K.3
-
34
-
-
66049135249
-
Generation of induced pluripotent stem cells using recombinant proteins
-
Zhou HY, Wu SL, Joo JY et al. Generation of induced pluripotent stem cells using recombinant proteins. Cell Stem Cell 4(5), 381-384 (2009).
-
(2009)
Cell Stem Cell
, vol.4
, Issue.5
, pp. 381-384
-
-
Zhou, H.Y.1
Wu, S.L.2
Joo, J.Y.3
-
35
-
-
66049143859
-
Generation of human induced pluripotent stem cells by direct delivery of reprogramming proteins
-
Kim D, Kim CH, Moon JI et al. Generation of human induced pluripotent stem cells by direct delivery of reprogramming proteins. Cell Stem Cell 4(6), 472-476 (2009).
-
(2009)
Cell Stem Cell
, vol.4
, Issue.6
, pp. 472-476
-
-
Kim, D.1
Kim, C.H.2
Moon, J.I.3
-
36
-
-
69949089630
-
IPS cells produce viable mice through tetraploid complementation
-
Zhao X, Li W, Lv Z et al. iPS cells produce viable mice through tetraploid complementation. Nature 461(7260), 86-90 (2009).
-
(2009)
Nature
, vol.461
, Issue.7260
, pp. 86-90
-
-
Zhao, X.1
Li, W.2
Lv, Z.3
-
37
-
-
56549127713
-
Guidelines and techniques for the generation of induced pluripotent stem cells
-
Maherali N, Hochedlinger K. Guidelines and techniques for the generation of induced pluripotent stem cells. Cell Stem Cell 3(6), 595-605 (2008).
-
(2008)
Cell Stem Cell
, vol.3
, Issue.6
, pp. 595-605
-
-
Maherali, N.1
Hochedlinger, K.2
-
38
-
-
70449625611
-
New strategies to generate induced pluripotent stem cells
-
OMalley J, Woltjen K, Kaji K. New strategies to generate induced pluripotent stem cells. Curr. Opin. Biotechnol. 20(5), 516-521 (2009).
-
(2009)
Curr. Opin. Biotechnol.
, vol.20
, Issue.5
, pp. 516-521
-
-
Omalley, J.1
Woltjen, K.2
Kaji, K.3
-
39
-
-
73849115031
-
Determinants of pluripotency: From avian, rodents, to primates
-
Martins-Taylor K, Xu RH. Determinants of pluripotency: from avian, rodents, to primates. J. Cell Biochem. 109(1), 16-25 (2010).
-
(2010)
J. Cell Biochem.
, vol.109
, Issue.1
, pp. 16-25
-
-
Martins-Taylor, K.1
Xu, R.H.2
-
40
-
-
77949656710
-
Switching cell fate: The remarkable rise of induced pluripotent stem cells and lineage reprogramming technologies
-
Selvaraj V, Plane JM, Williams AJ, Deng WB. Switching cell fate: the remarkable rise of induced pluripotent stem cells and lineage reprogramming technologies. Trends Biotechnol. 28(4), 214-223 (2010).
-
(2010)
Trends Biotechnol.
, vol.28
, Issue.4
, pp. 214-223
-
-
Selvaraj, V.1
Plane, J.M.2
Williams, A.J.3
Deng, W.B.4
-
41
-
-
41949134533
-
Generation of pluripotent stem cells from adult mouse liver and stomach cells
-
Aoi T, Yae K, Nakagawa M et al. Generation of pluripotent stem cells from adult mouse liver and stomach cells. Science 321(5889), 699-702 (2008).
-
(2008)
Science
, vol.321
, Issue.5889
, pp. 699-702
-
-
Aoi, T.1
Yae, K.2
Nakagawa, M.3
-
42
-
-
68249087053
-
Variation in the safety of induced pluripotent stem cell lines
-
Miura K, Okada Y, Aoi T et al. Variation in the safety of induced pluripotent stem cell lines. Nat. Biotechnol. 27(8), 743-745 (2009).
-
(2009)
Nat. Biotechnol.
, vol.27
, Issue.8
, pp. 743-745
-
-
Miura, K.1
Okada, Y.2
Aoi, T.3
-
43
-
-
77955449906
-
Epigenetic memory in induced pluripotent stem cells
-
Kim K, Doi A, Wen B et al. Epigenetic memory in induced pluripotent stem cells. Nature 467(7313), 285-290 (2010).
-
(2010)
Nature
, vol.467
, Issue.7313
, pp. 285-290
-
-
Kim, K.1
Doi, A.2
Wen, B.3
-
44
-
-
78650752402
-
Cell type of origin influences the molecular and functional properties of mouse induced pluripotent stem cells
-
Polo JM, Liu S, Figueroa ME et al. Cell type of origin influences the molecular and functional properties of mouse induced pluripotent stem cells. Nat. Biotechnol. 28(8), 848-855 (2010).
-
(2010)
Nat. Biotechnol.
, vol.28
, Issue.8
, pp. 848-855
-
-
Polo, J.M.1
Liu, S.2
Figueroa, M.E.3
-
45
-
-
70449344685
-
Live cell imaging distinguishes bona fide human iPS cells from partially reprogrammed cells
-
Chan EM, Ratanasirintrawoot S, Park IH et al. Live cell imaging distinguishes bona fide human iPS cells from partially reprogrammed cells. Nat. Biotechnol. 27(11), 1033-1037 (2009).
-
(2009)
Nat. Biotechnol.
, vol.27
, Issue.11
, pp. 1033-1037
-
-
Chan, E.M.1
Ratanasirintrawoot, S.2
Park, I.H.3
-
46
-
-
61749094336
-
Adipogenic differentiation of human induced pluripotent stem cells: Comparison with that of human embryonic stem cells
-
Taura D, Noguchi M, Sone M et al. Adipogenic differentiation of human induced pluripotent stem cells: comparison with that of human embryonic stem cells. FEBS Lett. 583(6), 1029-1033 (2009).
-
(2009)
FEBS Lett.
, vol.583
, Issue.6
, pp. 1029-1033
-
-
Taura, D.1
Noguchi, M.2
Sone, M.3
-
47
-
-
77950995392
-
Hemangioblastic derivatives from human induced pluripotent stem cells exhibit limited expansion and early senescence
-
Feng Q, Lu SJ, Klimanskaya I et al. Hemangioblastic derivatives from human induced pluripotent stem cells exhibit limited expansion and early senescence. Stem Cells 28(4), 704-712 (2010).
-
(2010)
Stem Cells
, vol.28
, Issue.4
, pp. 704-712
-
-
Feng, Q.1
Lu, S.J.2
Klimanskaya, I.3
-
48
-
-
70349445082
-
Transcriptional signature and memory retention of human-induced pluripotent stem cells
-
Marchetto MCN, Yeo GW, Kainohana O, Marsala M, Gage FH, Muotri AR. Transcriptional signature and memory retention of human-induced pluripotent stem cells. Plos One 4(9), e7076 (2009).
-
(2009)
Plos One
, vol.4
, Issue.9
-
-
McN, M.1
Yeo, G.W.2
Kainohana, O.3
Marsala, M.4
Gage, F.H.5
Muotri, A.R.6
-
49
-
-
67649222358
-
Induced pluripotent stem cells and embryonic stem cells are distinguished by gene expression signatures
-
Chin MH, Mason MJ, Xie W et al. Induced pluripotent stem cells and embryonic stem cells are distinguished by gene expression signatures. Cell Stem Cell 5(1), 111-123 (2009).
-
(2009)
Cell Stem Cell
, vol.5
, Issue.1
, pp. 111-123
-
-
Chin, M.H.1
Mason, M.J.2
Xie, W.3
-
50
-
-
77952425747
-
Aberrant silencing of imprinted genes on chromosome 12qF1 in mouse induced pluripotent stem cells
-
Stadtfeld M, Apostolou E, Akutsu H et al. Aberrant silencing of imprinted genes on chromosome 12qF1 in mouse induced pluripotent stem cells. Nature 465(7295), 175-181 (2010).
-
(2010)
Nature
, vol.465
, Issue.7295
, pp. 175-181
-
-
Stadtfeld, M.1
Apostolou, E.2
Akutsu, H.3
-
51
-
-
77956260872
-
Chromatin structure and gene expression programs of human embryonic and induced pluripotent stem cells
-
Guenther MG, Frampton GM, Soldner F et al. Chromatin structure and gene expression programs of human embryonic and induced pluripotent stem cells. Cell Stem Cell. 7(2), 249-257 (2010).
-
(2010)
Cell Stem Cell.
, vol.7
, Issue.2
, pp. 249-257
-
-
Guenther, M.G.1
Frampton, G.M.2
Soldner, F.3
-
52
-
-
57449099068
-
Precision proteomics: The case for high resolution and high mass accuracy
-
Mann M, Kelleher NL. Precision proteomics: the case for high resolution and high mass accuracy. Proc. Natl Acad. Sci. USA 105(47), 18132-18138 (2008).
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, Issue.47
, pp. 18132-18138
-
-
Mann, M.1
Kelleher, N.L.2
-
53
-
-
68749094119
-
Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics
-
Picotti P, Bodenmiller B, Mueller LN, Domon B, Aebersold R. Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics. Cell 138(4), 795-806 (2009).
-
(2009)
Cell
, vol.138
, Issue.4
, pp. 795-806
-
-
Picotti, P.1
Bodenmiller, B.2
Mueller, L.N.3
Domon, B.4
Aebersold, R.5
-
54
-
-
55249096894
-
Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast
-
de Godoy LM, Olsen JV, Cox J et al. Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast. Nature 455(7217), 1251-1254 (2008).
-
(2008)
Nature
, vol.455
, Issue.7217
, pp. 1251-1254
-
-
De Godoy, L.M.1
Olsen, J.V.2
Cox, J.3
-
55
-
-
54749158155
-
Multidimensional LC separations in shotgun proteomics
-
Motoyama A, Yates JR 3rd. Multidimensional LC separations in shotgun proteomics. Anal. Chem. 80(19), 7187-7193 (2008).
-
(2008)
Anal. Chem.
, vol.80
, Issue.19
, pp. 7187-7193
-
-
Motoyama, A.1
Yates III, J.R.2
-
56
-
-
33644524918
-
Mass spectrometry-based proteomics turns quantitative
-
Ong SE, Mann M. Mass spectrometry-based proteomics turns quantitative. Nat. Chem. Biol. 1(5), 252-262 (2005).
-
(2005)
Nat. Chem. Biol.
, vol.1
, Issue.5
, pp. 252-262
-
-
Ong, S.E.1
Mann, M.2
-
57
-
-
0032875697
-
Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
-
DOI 10.1038/13690
-
Gygi SP, Rist B, Gerber SA, Turecek F, Gelb MH, Aebersold R. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 17(10), 994-999 (1999). (Pubitemid 29474856)
-
(1999)
Nature Biotechnology
, vol.17
, Issue.10
, pp. 994-999
-
-
Gygi, S.P.1
Rist, B.2
Gerber, S.A.3
Turecek, F.4
Gelb, M.H.5
Aebersold, R.6
-
58
-
-
0033535961
-
Accurate quantitation of protein expression and site-specific phosphorylation
-
DOI 10.1073/pnas.96.12.6591
-
Oda Y, Huang K, Cross FR, Cowburn D, Chait BT. Accurate quantitation of protein expression and site-specific phosphorylation. Proc. Natl Acad. Sci. USA 96(12), 6591-6596 (1999). (Pubitemid 29274927)
-
(1999)
Proceedings of the National Academy of Sciences of the United States of America
, vol.96
, Issue.12
, pp. 6591-6596
-
-
Oda, Y.1
Huang, K.2
Cross, F.R.3
Cowburn, D.4
Chait, B.T.5
-
59
-
-
34748916981
-
Quantitative mass spectrometry in proteomics: A critical review
-
DOI 10.1007/s00216-007-1486-6, Proteomics/Molecular Imaging
-
Bantscheff M, Schirle M, Sweetman G, Rick J, Kuster B. Quantitative mass spectrometry in proteomics: a critical review. Anal. Bioanal. Chem. 389(4), 1017-1031 (2007). (Pubitemid 47482251)
-
(2007)
Analytical and Bioanalytical Chemistry
, vol.389
, Issue.4
, pp. 1017-1031
-
-
Bantscheff, M.1
Schirle, M.2
Sweetman, G.3
Rick, J.4
Kuster, B.5
-
60
-
-
72449173774
-
Current trends in quantitative proteomics
-
Elliott MH, Smith DS, Parker CE, Borchers C. Current trends in quantitative proteomics. J. Mass Spectrom. 44(12), 1637-1660 (2009).
-
(2009)
J. Mass Spectrom.
, vol.44
, Issue.12
, pp. 1637-1660
-
-
Elliott, M.H.1
Smith, D.S.2
Parker, C.E.3
Borchers, C.4
-
61
-
-
33845329203
-
Functional and quantitative proteomics using SILAC
-
DOI 10.1038/nrm2067, PII NRM2067
-
Mann M. Functional and quantitative proteomics using SILAC. Nat. Rev. Mol. Cell Biol. 7(12), 952-958 (2006). (Pubitemid 44871421)
-
(2006)
Nature Reviews Molecular Cell Biology
, vol.7
, Issue.12
, pp. 952-958
-
-
Mann, M.1
-
62
-
-
77955462279
-
Addressing accuracy and precision issues in iTRAQ quantitation
-
Karp NA, Huber W, Sadowski PG, Charles PD, Hester SV, Lilley KS. Addressing accuracy and precision issues in iTRAQ quantitation. Mol. Cell Proteomics 9(9), 1885-1897 (2010).
-
(2010)
Mol. Cell Proteomics
, vol.9
, Issue.9
, pp. 1885-1897
-
-
Karp, N.A.1
Huber, W.2
Sadowski, P.G.3
Charles, P.D.4
Hester, S.V.5
Lilley, K.S.6
-
63
-
-
33744926266
-
Quantitative proteomics reveals posttranslational control as a regulatory factor in primary hematopoietic stem cells
-
DOI 10.1182/blood-2005-12-4995
-
Unwin RD, Smith DL, Blinco D et al. Quantitative proteomics reveals posttranslational control as a regulatory factor in primary hematopoietic stem cells. Blood 107(12), 4687-4694 (2006). (Pubitemid 43882616)
-
(2006)
Blood
, vol.107
, Issue.12
, pp. 4687-4694
-
-
Unwin, R.D.1
Smith, D.L.2
Blinco, D.3
Wilson, C.L.4
Miller, C.J.5
Evans, C.A.6
Jaworska, E.7
Baldwin, S.A.8
Barnes, K.9
Pierce, A.10
Spooncer, E.11
Whetton, A.D.12
-
64
-
-
42649132889
-
Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins
-
DOI 10.1074/mcp.M700460-MCP200
-
Graumann J, Hubner NC, Kim JB et al. Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins. Mol. Cell Proteomics 7(4), 672-683 (2008). (Pubitemid 351597479)
-
(2008)
Molecular and Cellular Proteomics
, vol.7
, Issue.4
, pp. 672-683
-
-
Graumann, J.1
Hubner, N.C.2
Kim, J.B.3
Ko, K.4
Moser, M.5
Kumar, C.6
Cox, J.7
Scholer, H.8
Mann, M.9
-
65
-
-
34548356772
-
An experimental correction for arginine-to-proline conversion artifacts in SILAC-based quantitative proteomics [1]
-
DOI 10.1038/nmeth0907-677, PII NMETH0907-677
-
Van Hoof D, Pinkse MW, Oostwaard DW, Mummery CL, Heck AJ, Krijgsveld J. An experimental correction for arginine-to-proline conversion artifacts in SILAC-based quantitative proteomics. Nat. Methods 4(9), 677-678 (2007). (Pubitemid 47338150)
-
(2007)
Nature Methods
, vol.4
, Issue.9
, pp. 677-678
-
-
Van Hoof, D.1
Pinkse, M.W.H.2
Oostwaard, D.W.-V.3
Mummery, C.L.4
Heck, A.J.R.5
Krijgsveld, J.6
-
66
-
-
67449107495
-
Stable isotope labeling by amino acids in cell culture (SILAC) and quantitative comparison of the membrane proteomes of self-renewing and differentiating human embryonic stem cells
-
Prokhorova TA, Rigbolt KT, Johansen PT et al. Stable isotope labeling by amino acids in cell culture (SILAC) and quantitative comparison of the membrane proteomes of self-renewing and differentiating human embryonic stem cells. Mol. Cell Proteomics 8(5), 959-970 (2009).
-
(2009)
Mol. Cell Proteomics
, vol.8
, Issue.5
, pp. 959-970
-
-
Prokhorova, T.A.1
Rigbolt, K.T.2
Johansen, P.T.3
-
67
-
-
52649167339
-
Prevention of amino acid conversion in SILAC experiments with embryonic stem cells
-
Bendall SC, Hughes C, Stewart MH, Doble B, Bhatia M, Lajoie GA. Prevention of amino acid conversion in SILAC experiments with embryonic stem cells. Mol. Cell Proteomics 7(9), 1587-1597 (2008).
-
(2008)
Mol. Cell Proteomics
, vol.7
, Issue.9
, pp. 1587-1597
-
-
Bendall, S.C.1
Hughes, C.2
Stewart, M.H.3
Doble, B.4
Bhatia, M.5
Lajoie, G.A.6
-
68
-
-
77952956167
-
Decoding signalling networks by mass spectrometry-based proteomics
-
Choudhary C, Mann M. Decoding signalling networks by mass spectrometry-based proteomics. Nat. Rev. Mol. Cell Biol. 11(6), 427-439 (2010).
-
(2010)
Nat. Rev. Mol. Cell Biol.
, vol.11
, Issue.6
, pp. 427-439
-
-
Choudhary, C.1
Mann, M.2
-
69
-
-
77958016155
-
Quantitative proteome analysis of pluripotent cells by iTRAQ mass tagging reveals post-transcriptional regulation of proteins required for ES cell self-renewal
-
OBrien RN, Shen Z, Tachikawa K, Lee PJ, Briggs SP. Quantitative proteome analysis of pluripotent cells by iTRAQ mass tagging reveals post-transcriptional regulation of proteins required for ES cell self-renewal. Mol. Cell Proteomics 9(10), 2238-2251 (2010).
-
(2010)
Mol. Cell Proteomics
, vol.9
, Issue.10
, pp. 2238-2251
-
-
Obrien, R.N.1
Shen, Z.2
Tachikawa, K.3
Lee, P.J.4
Briggs, S.P.5
-
70
-
-
41549147720
-
Quantitative proteomics analysis demonstrates post-transcriptional regulation of embryonic stem cell differentiation to hematopoiesis
-
DOI 10.1074/mcp.M700370-MCP200
-
Williamson AJ, Smith DL, Blinco D et al. Quantitative proteomics analysis demonstrates post-transcriptional regulation of embryonic stem cell differentiation to hematopoiesis. Mol. Cell Proteomics 7(3), 459-472 (2008). (Pubitemid 351472457)
-
(2008)
Molecular and Cellular Proteomics
, vol.7
, Issue.3
, pp. 459-472
-
-
Williamson, A.J.K.1
Smith, D.L.2
Blinco, D.3
Unwin, R.D.4
Pearson, S.5
Wilson, C.6
Miller, C.7
Lancashire, L.8
Lacaud, G.9
Kouskoff, V.10
Whetton, A.D.11
-
71
-
-
70350449478
-
Comparative proteome and transcriptome analyses of embryonic stem cells during embryoid body-based differentiation
-
Fathi A, Pakzad M, Taei A et al. Comparative proteome and transcriptome analyses of embryonic stem cells during embryoid body-based differentiation. Proteomics 9(21), 4859-4870 (2009).
-
(2009)
Proteomics
, vol.9
, Issue.21
, pp. 4859-4870
-
-
Fathi, A.1
Pakzad, M.2
Taei, A.3
-
72
-
-
70450160004
-
Systems-level dynamic analyses of fate change in murine embryonic stem cells
-
Lu R, Markowetz F, Unwin RD et al. Systems-level dynamic analyses of fate change in murine embryonic stem cells. Nature 462(7271), 358-362 (2009).
-
(2009)
Nature
, vol.462
, Issue.7271
, pp. 358-362
-
-
Lu, R.1
Markowetz, F.2
Unwin, R.D.3
-
73
-
-
42649126705
-
A hierarchical network controls protein translation during murine embryonic stem cell self-renewal and differentiation
-
DOI 10.1016/j.stem.2008.03.013, PII S1934590908001276
-
Sampath P, Pritchard DK, Pabon L et al. A hierarchical network controls protein translation during murine embryonic stem cell self-renewal and differentiation. Cell Stem Cell 2(5), 448-460 (2008). (Pubitemid 351598082)
-
(2008)
Cell Stem Cell
, vol.2
, Issue.5
, pp. 448-460
-
-
Sampath, P.1
Pritchard, D.K.2
Pabon, L.3
Reinecke, H.4
Schwartz, S.M.5
Morris, D.R.6
Murry, C.E.7
-
74
-
-
38649139653
-
Identification of mouse embryonic stem cell-associated proteins
-
DOI 10.1021/pr700560t
-
Baharvand H, Fathi A, Gourabi H, Mollamohammadi S, Salekdeh GH. Identification of mouse embryonic stem cell-associated proteins. J. Proteome Res. 7(1), 412-423 (2008). (Pubitemid 351171155)
-
(2008)
Journal of Proteome Research
, vol.7
, Issue.1
, pp. 412-423
-
-
Baharvand, H.1
Fathi, A.2
Gourabi, H.3
Mollamohammadi, S.4
Salekdeh, G.H.5
-
75
-
-
65249184400
-
Proteomic analysis of monkey embryonic stem cell during differentiation
-
Nasrabadi D, Rezaei Larijani M, Pirhaji L et al. Proteomic analysis of monkey embryonic stem cell during differentiation. J. Proteome Res. 8(3), 1527-1539 (2009).
-
(2009)
J. Proteome Res.
, vol.8
, Issue.3
, pp. 1527-1539
-
-
Nasrabadi, D.1
Rezaei Larijani, M.2
Pirhaji, L.3
-
76
-
-
6344240952
-
Proteomic signatures and aberrations of mouse embryonic stem cells containing a single human chromosome 21 in neuronal differentiation: An in vitro model of down syndrome
-
DOI 10.1016/j.neuroscience.2004.06.081, PII S0306452204006633
-
Kadota M, Nishigaki R, Wang CC et al. Proteomic signatures and aberrations of mouse embryonic stem cells containing a single human chromosome 21 in neuronal differentiation: an in vitro model of Down syndrome. NeuroScience 129(2), 325-335 (2004). (Pubitemid 39388852)
-
(2004)
Neuroscience
, vol.129
, Issue.2
, pp. 325-335
-
-
Kadota, M.1
Nishigaki, R.2
Wang, C.C.3
Toda, T.4
Shirayoshi, Y.5
Inoue, T.6
Gojobori, T.7
Ikeo, K.8
Rogers, M.S.9
Oshimura, M.10
-
77
-
-
0034855451
-
Proteomic characterization of early-stage differentiation of mouse embryonic stem cells into neural cells induced by all-trans retinoic acid in vitro
-
Guo X, Ying W, Wan J et al. Proteomic characterization of early-stage differentiation of mouse embryonic stem cells into neural cells induced by all-trans retinoic acid in vitro. Electrophoresis 22(14), 3067-3075 (2001).
-
(2001)
Electrophoresis
, vol.22
, Issue.14
, pp. 3067-3075
-
-
Guo, X.1
Ying, W.2
Wan, J.3
-
78
-
-
23944505485
-
Chromatin-related proteins in pluripotent mouse embryonic stem cells are downregulated after removal of leukemia inhibitory factor
-
DOI 10.1016/j.bbrc.2005.07.128, PII S0006291X0501613X
-
Kurisaki A, Hamazaki TS, Okabayashi K et al. Chromatin-related proteins in pluripotent mouse embryonic stem cells are downregulated after removal of leukemia inhibitory factor. Biochem. Biophys. Res. Commun. 335(3), 667-675 (2005). (Pubitemid 41188251)
-
(2005)
Biochemical and Biophysical Research Communications
, vol.335
, Issue.3
, pp. 667-675
-
-
Kurisaki, A.1
Hamazaki, T.S.2
Okabayashi, K.3
Iida, T.4
Nishine, T.5
Chonan, R.6
Kido, H.7
Tsunasawa, S.8
Nishimura, O.9
Asashima, M.10
Sugino, H.11
-
79
-
-
59349093511
-
Reptin52 expression during in vitro neural differentiation of human embryonic stem cells
-
Barthéléry M, Jaishankar A, Salli U, Vrana KE. Reptin52 expression during in vitro neural differentiation of human embryonic stem cells. Neurosci. Lett. 452(1), 47-51 (2009).
-
(2009)
Neurosci. Lett.
, vol.452
, Issue.1
, pp. 47-51
-
-
Barthéléry, M.1
Jaishankar, A.2
Salli, U.3
Vrana, K.E.4
-
80
-
-
77949304086
-
Nuclear proteome analysis of monkey embryonic stem cells during differentiation
-
Nasrabadi D, Larijani MR, Fathi A et al. Nuclear proteome analysis of monkey embryonic stem cells during differentiation. Stem Cell Rev. 6(1), 50-61 (2010).
-
(2010)
Stem Cell Rev.
, vol.6
, Issue.1
, pp. 50-61
-
-
Nasrabadi, D.1
Larijani, M.R.2
Fathi, A.3
-
81
-
-
33746306545
-
A quest for human and mouse embryonic stem cell-specific proteins
-
DOI 10.1074/mcp.M500405-MCP200
-
Van Hoof D, Passier R, Ward-Van Oostwaard D et al. A quest for human and mouse embryonic stem cell-specific proteins. Mol. Cell Proteomics 5(7), 1261-1273 (2006). (Pubitemid 44103397)
-
(2006)
Molecular and Cellular Proteomics
, vol.5
, Issue.7
, pp. 1261-1273
-
-
Van Hoof, D.1
Passier, R.2
Ward-Van Oostwaard, D.3
Pinkse, M.W.H.4
Heck, A.J.R.5
Mummery, C.L.6
Krijgsveld, J.7
-
82
-
-
42649116166
-
Coupled global and targeted proteomics of human embryonic stem cells during induced differentiation
-
DOI 10.1074/mcp.M700399-MCP200
-
Yocum AK, Gratsch TE, Leff N et al. Coupled global and targeted proteomics of human embryonic stem cells during induced differentiation. Mol. Cell Proteomics 7(4), 750-767 (2008). (Pubitemid 351597485)
-
(2008)
Molecular and Cellular Proteomics
, vol.7
, Issue.4
, pp. 750-767
-
-
Yocum, A.K.1
Gratsch, T.E.2
Leff, N.3
Strahler, J.R.4
Hunter, C.L.5
Walker, A.K.6
Michailidis, G.7
Omenn, G.S.8
O'Shea, K.S.9
Andrews, P.C.10
-
83
-
-
65249167537
-
Temporal analysis of neural differentiation using quantitative proteomics
-
Chaerkady R, Kerr CL, Marimuthu A et al. Temporal analysis of neural differentiation using quantitative proteomics. J. Proteome Res. 8(3), 1315-1326 (2009).
-
(2009)
J. Proteome Res.
, vol.8
, Issue.3
, pp. 1315-1326
-
-
Chaerkady, R.1
Kerr, C.L.2
Marimuthu, A.3
-
84
-
-
33751092246
-
A protein interaction network for pluripotency of embryonic stem cells
-
DOI 10.1038/nature05284, PII NATURE05284
-
Wang J, Rao S, Chu J et al. A protein interaction network for pluripotency of embryonic stem cells. Nature 444(7117), 364-368 (2006). (Pubitemid 44764111)
-
(2006)
Nature
, vol.444
, Issue.7117
, pp. 364-368
-
-
Wang, J.1
Rao, S.2
Chu, J.3
Shen, X.4
Levasseur, D.N.5
Theunissen, T.W.6
Orkin, S.H.7
-
85
-
-
33847287408
-
Differences between human embryonic stem cell lines
-
DOI 10.1093/humupd/dml041
-
Allegrucci C, Young LE. Differences between human embryonic stem cell lines. Hum. Reprod. Update 13(2), 103-120 (2007). (Pubitemid 46323190)
-
(2007)
Human Reproduction Update
, vol.13
, Issue.2
, pp. 103-120
-
-
Allegrucci, C.1
Young, L.E.2
-
86
-
-
33645521820
-
Establishing standards for the characterization of human embryonic stem cell lines
-
Loring JF, Rao MS. Establishing standards for the characterization of human embryonic stem cell lines. Stem Cells 24(1), 145-150 (2006).
-
(2006)
Stem Cells
, vol.24
, Issue.1
, pp. 145-150
-
-
Loring, J.F.1
Rao, M.S.2
-
87
-
-
0942298178
-
Long-term culture of human embryonic stem cells in feeder-free conditions
-
DOI 10.1002/dvdy.10430
-
Rosler ES, Fisk GJ, Ares X et al. Long-term culture of human embryonic stem cells in feeder-free conditions. Dev. Dyn. 229(2), 259-274 (2004). (Pubitemid 38140465)
-
(2004)
Developmental Dynamics
, vol.229
, Issue.2
, pp. 259-274
-
-
Rosler, E.S.1
Fisk, G.J.2
Ares, X.3
Irving, J.4
Miura, T.5
Rao, M.S.6
Carpenter, M.K.7
-
88
-
-
27144538978
-
Genomic alterations in cultured human embryonic stem cells
-
DOI 10.1038/ng1631, PII N1631
-
Maitra A, Arking DE, Shivapurkar N et al. Genomic alterations in cultured human embryonic stem cells. Nat. Genet. 37(10), 1099-1103 (2005). (Pubitemid 41486662)
-
(2005)
Nature Genetics
, vol.37
, Issue.10
, pp. 1099-1103
-
-
Maitra, A.1
Arking, D.E.2
Shivapurkar, N.3
Ikeda, M.4
Stastny, V.5
Kassauei, K.6
Sui, G.7
Cutler, D.J.8
Liu, Y.9
Brimble, S.N.10
Noaksson, K.11
Hyllner, J.12
Schulz, T.C.13
Zeng, X.14
Freed, W.J.15
Crook, J.16
Abraham, S.17
Colman, A.18
Sartipy, P.19
Matsui, S.-I.20
Carpenter, M.21
Gazdar, A.F.22
Rao, M.23
Chakravarti, A.24
more..
-
89
-
-
34547896274
-
Concise review: Trends in stem cell proteomics
-
DOI 10.1634/stemcells.2007-0107
-
Baharvand H, Fathi A, van Hoof D, Salekdeh GH. Concise review: trends in stem cell proteomics. Stem Cells 25(8), 1888-1903 (2007). (Pubitemid 47258167)
-
(2007)
Stem Cells
, vol.25
, Issue.8
, pp. 1888-1903
-
-
Baharvand, H.1
Fathi, A.2
Van Hoof, D.3
Salekdeh, G.H.4
-
90
-
-
0034983625
-
Multilineage differentiation from human embryonic stem cell lines
-
Odorico JS, Kaufman DS, Thomson JA. Multilineage differentiation from human embryonic stem cell lines. Stem Cells 19(3), 193-204 (2001). (Pubitemid 32524540)
-
(2001)
Stem Cells
, vol.19
, Issue.3
, pp. 193-204
-
-
Odorico, J.S.1
Kaufman, D.S.2
Thomson, J.A.3
-
91
-
-
84984933087
-
The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry
-
Villen J, Gygi SP. The SCX/IMAC enrichment approach for global phosphorylation analysis by mass spectrometry. Nat. Protoc. 3(10), 1630-1638 (2008).
-
(2008)
Nat. Protoc.
, vol.3
, Issue.10
, pp. 1630-1638
-
-
Villen, J.1
Gygi, S.P.2
-
92
-
-
63049113651
-
Analytical strategies for phosphoproteomics
-
Thingholm TE, Jensen ON, Larsen MR. Analytical strategies for phosphoproteomics. Proteomics 9(6), 1451-1468 (2009).
-
(2009)
Proteomics
, vol.9
, Issue.6
, pp. 1451-1468
-
-
Thingholm, T.E.1
Jensen, O.N.2
Larsen, M.R.3
-
93
-
-
4444371652
-
Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics
-
DOI 10.1038/nbt1005
-
Blagoev B, Ong SE, Kratchmarova I, Mann M. Temporal analysis of phosphotyrosine-dependent signaling networks by quantitative proteomics. Nat. Biotechnol. 22(9), 1139-1145 (2004). (Pubitemid 39166852)
-
(2004)
Nature Biotechnology
, vol.22
, Issue.9
, pp. 1139-1145
-
-
Blagoev, B.1
Ong, S.-E.2
Kratchmarova, I.3
Mann, M.4
-
94
-
-
26844576371
-
Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules
-
DOI 10.1074/mcp.M500089-MCP200
-
Zhang Y, Wolf-Yadlin A, Ross PL et al. Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules. Mol. Cell Proteomics 4(9), 1240-1250 (2005). (Pubitemid 41448712)
-
(2005)
Molecular and Cellular Proteomics
, vol.4
, Issue.9
, pp. 1240-1250
-
-
Zhang, Y.1
Wolf-Yadlin, A.2
Ross, P.L.3
Pappin, D.J.4
Rush, J.5
Lauffenburger, D.A.6
White, F.M.7
-
95
-
-
40649117198
-
Dissection of the insulin signaling pathway via quantitative phosphoproteomics
-
DOI 10.1073/pnas.0711713105
-
Kruger M, Kratchmarova I, Blagoev B, Tseng YH, Kahn CR, Mann M. Dissection of the insulin signaling pathway via quantitative phosphoproteomics. Proc. Natl Acad. Sci. USA 105(7), 2451-2456 (2008). (Pubitemid 351520534)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.7
, pp. 2451-2456
-
-
Kruger, M.1
Kratchmarova, I.2
Blagoev, B.3
Tseng, Y.-H.4
Kahn, C.R.5
Mann, M.6
-
96
-
-
33750456519
-
Global, in vivo, and site-specific phosphorylation dynamics in signaling networks
-
DOI 10.1016/j.cell.2006.09.026, PII S0092867406012748
-
Olsen JV, Blagoev B, Gnad F et al. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. Cell 127(3), 635-648 (2006). (Pubitemid 44647421)
-
(2006)
Cell
, vol.127
, Issue.3
, pp. 635-648
-
-
Olsen, J.V.1
Blagoev, B.2
Gnad, F.3
Macek, B.4
Kumar, C.5
Mortensen, P.6
Mann, M.7
-
97
-
-
20344363684
-
Cell Signalling: Mechanism of divergent growth factor effects in mesenchymal stem cell differentiation
-
DOI 10.1126/science.1107627
-
Kratchmarova I, Blagoev B, Haack-Sorensen M, Kassem M, Mann M. Mechanism of divergent growth factor effects in mesenchymal stem cell differentiation. Science 308(5727), 1472-1477 (2005). (Pubitemid 40791302)
-
(2005)
Science
, vol.308
, Issue.5727
, pp. 1472-1477
-
-
Kratchmarova, I.1
Blagoev, B.2
Haack-Sorensen, M.3
Kassem, M.4
Mann, M.5
-
98
-
-
59049086847
-
Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry
-
Swaney DL, Wenger CD, Thomson JA, Coon JJ. Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry. Proc. Natl Acad. Sci. USA 106(4), 995-1000 (2009).
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, Issue.4
, pp. 995-1000
-
-
Swaney, D.L.1
Wenger, C.D.2
Thomson, J.A.3
Coon, J.J.4
-
99
-
-
67849121794
-
Phosphoproteomic analysis of human embryonic stem cells
-
Brill LM, Xiong W, Lee KB et al. Phosphoproteomic analysis of human embryonic stem cells. Cell Stem Cell 5(2), 204-213 (2009).
-
(2009)
Cell Stem Cell
, vol.5
, Issue.2
, pp. 204-213
-
-
Brill, L.M.1
Xiong, W.2
Lee, K.B.3
-
100
-
-
67849106825
-
Phosphorylation dynamics during early differentiation of human embryonic stem cells
-
Van Hoof D, Munoz J, Braam SR et al. Phosphorylation dynamics during early differentiation of human embryonic stem cells. Cell Stem Cell 5(2), 214-226 (2009).
-
(2009)
Cell Stem Cell
, vol.5
, Issue.2
, pp. 214-226
-
-
Van Hoof, D.1
Munoz, J.2
Braam, S.R.3
-
101
-
-
67849124643
-
Unraveling the human embryonic stem cell phosphoproteome
-
Hutchins AP, Robson P. Unraveling the human embryonic stem cell phosphoproteome. Cell Stem Cell 5(2), 126-128 (2009).
-
(2009)
Cell Stem Cell
, vol.5
, Issue.2
, pp. 126-128
-
-
Hutchins, A.P.1
Robson, P.2
-
102
-
-
75849156133
-
Simplistic pathways or complex networks?
-
Jorgensen C, Linding R. Simplistic pathways or complex networks? Curr. Opin. Genet. Dev. 20(1), 15-22 (2010).
-
(2010)
Curr. Opin. Genet. Dev.
, vol.20
, Issue.1
, pp. 15-22
-
-
Jorgensen, C.1
Linding, R.2
-
103
-
-
34250743173
-
Systematic discovery of in vivo phosphorylation networks
-
DOI 10.1016/j.cell.2007.05.052, PII S0092867407007271
-
Linding R, Jensen LJ, Ostheimer GJ et al. Systematic discovery of in vivo phosphorylation networks. Cell 129(7), 1415-1426 (2007). (Pubitemid 46962092)
-
(2007)
Cell
, vol.129
, Issue.7
, pp. 1415-1426
-
-
Linding, R.1
Jensen, L.J.2
Ostheimer, G.J.3
Van Vugt, M.A.T.M.4
Jorgensen, C.5
Miron, I.M.6
Diella, F.7
Colwill, K.8
Taylor, L.9
Elder, K.10
Metalnikov, P.11
Nguyen, V.12
Pasculescu, A.13
Jin, J.14
Park, J.G.15
Samson, L.D.16
Woodgett, J.R.17
Russell, RobertB.18
Bork, P.19
Yaffe, M.B.20
Pawson, T.21
more..
-
104
-
-
54249117296
-
Phosphorylation networks regulating JNK activity in diverse genetic backgrounds
-
Bakal C, Linding R, Llense F et al. Phosphorylation networks regulating JNK activity in diverse genetic backgrounds. Science 322(5900), 453-456 (2008).
-
(2008)
Science
, vol.322
, Issue.5900
, pp. 453-456
-
-
Bakal, C.1
Linding, R.2
Llense, F.3
-
105
-
-
33745865934
-
Chromatin in pluripotent embryonic stem cells and differentiation
-
DOI 10.1038/nrm1938, PII NRM1938
-
Meshorer E, Misteli T. Chromatin in pluripotent embryonic stem cells and differentiation. Nat. Rev. Mol. Cell Biol. 7(7), 540-546 (2006). (Pubitemid 44036459)
-
(2006)
Nature Reviews Molecular Cell Biology
, vol.7
, Issue.7
, pp. 540-546
-
-
Meshorer, E.1
Misteli, T.2
-
106
-
-
43749098985
-
DNA methylation landscapes: Provocative insights from epigenomics
-
DOI 10.1038/nrg2341, PII NRG2341
-
Suzuki MM, Bird A. DNA methylation landscapes: provocative insights from epigenomics. Nat. Rev. Genet. 9(6), 465-476 (2008). (Pubitemid 351693975)
-
(2008)
Nature Reviews Genetics
, vol.9
, Issue.6
, pp. 465-476
-
-
Suzuki, M.M.1
Bird, A.2
-
107
-
-
33847076849
-
Chromatin modifications and their function
-
DOI 10.1016/j.cell.2007.02.005, PII S0092867407001845
-
Kouzarides T. Chromatin modifications and their function. Cell 128(4), 693-705 (2007). (Pubitemid 46273577)
-
(2007)
Cell
, vol.128
, Issue.4
, pp. 693-705
-
-
Kouzarides, T.1
-
109
-
-
33646872978
-
Chromatin signatures of pluripotent cell lines
-
Azuara V, Perry P, Sauer S et al. Chromatin signatures of pluripotent cell lines. Nat. Cell Biol. 8(5), 532-538 (2006).
-
(2006)
Nat. Cell Biol.
, vol.8
, Issue.5
, pp. 532-538
-
-
Azuara, V.1
Perry, P.2
Sauer, S.3
-
110
-
-
33646070846
-
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
-
Bernstein BE, Mikkelsen TS, Xie XH et al. A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell 125(2), 315-326 (2006).
-
(2006)
Cell
, vol.125
, Issue.2
, pp. 315-326
-
-
Bernstein, B.E.1
Mikkelsen, T.S.2
Xie, X.H.3
-
111
-
-
34548434716
-
Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells
-
DOI 10.1016/j.stem.2007.08.003, PII S1934590907001221
-
Pan GJ, Tian SL, Nie J et al. Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells. Cell Stem Cell 1(3), 299-312 (2007). (Pubitemid 47355329)
-
(2007)
Cell Stem Cell
, vol.1
, Issue.3
, pp. 299-312
-
-
Pan, G.1
Tian, S.2
Nie, J.3
Yang, C.4
Ruotti, V.5
Wei, H.6
Jonsdottir, G.A.7
Stewart, R.8
Thomson, J.A.9
-
112
-
-
77649241203
-
Screening the mammalian extracellular proteome for regulators of embryonic human stem cell pluripotency
-
Gonzalez R, Jennings LL, Knuth M et al. Screening the mammalian extracellular proteome for regulators of embryonic human stem cell pluripotency. Proc. Natl Acad. Sci. USA 107(8), 3552-3557 (2010).
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, Issue.8
, pp. 3552-3557
-
-
Gonzalez, R.1
Jennings, L.L.2
Knuth, M.3
-
113
-
-
77949334637
-
ATP dependent chromatin remodeling enzymes in embryonic stem cells
-
Saladi SV, de la Serna IL. ATP dependent chromatin remodeling enzymes in embryonic stem cells. Stem Cell Rev. 6(1), 62-73 (2010).
-
(2010)
Stem Cell Rev.
, vol.6
, Issue.1
, pp. 62-73
-
-
Saladi, S.V.1
De La Serna, I.L.2
-
114
-
-
46149110511
-
An RNAi Screen of Chromatin Proteins Identifies Tip60-p400 as a Regulator of Embryonic Stem Cell Identity
-
DOI 10.1016/j.cell.2008.05.031, PII S0092867408006922
-
Fazzio TG, Huff JT, Panning B. An RNAi screen of chromatin proteins identifies Tip60-p400 as a regulator of embryonic stem cell identity. Cell 134(1), 162-174 (2008). (Pubitemid 351905738)
-
(2008)
Cell
, vol.134
, Issue.1
, pp. 162-174
-
-
Fazzio, T.G.1
Huff, J.T.2
Panning, B.3
-
115
-
-
46449094276
-
Dissecting direct reprogramming through integrative genomic analysis
-
DOI 10.1038/nature07056, PII NATURE07056
-
Mikkelsen TS, Hanna J, Zhang XL et al. Dissecting direct reprogramming through integrative genomic analysis. Nature 454(7200), 49-55 (2008). (Pubitemid 351931978)
-
(2008)
Nature
, vol.454
, Issue.7200
, pp. 49-55
-
-
Mikkelsen, T.S.1
Hanna, J.2
Zhang, X.3
Ku, M.4
Wernig, M.5
Schorderet, P.6
Bernstein, B.E.7
Jaenisch, R.8
Lander, E.S.9
Meissner, A.10
-
116
-
-
0016159704
-
The determination of the primary structure of histone f3 from chicken erythrocytes by automatic edman degradation
-
Brandt WF, Holt C. The determination of the primary structure of histone f3 from chicken erythrocytes by automatic edman degradation. Eur. J. Biochem. 46(2), 407-417 (1974).
-
(1974)
Eur. J. Biochem.
, vol.46
, Issue.2
, pp. 407-417
-
-
Brandt, W.F.1
Holt, C.2
-
118
-
-
0017327721
-
Amino terminal sequence identity of ubiquitin and the nonhistone component of nuclear protein A24
-
DOI 10.1016/0006-291X(77)90352-7
-
Hunt LT, Dayhoff MO. Amino-terminal sequence identity of ubiquitin and nonhistone component of nuclear protein A24. Biochem. Biophys. Res. Commun. 74(2), 650-655 (1977). (Pubitemid 8022254)
-
(1977)
Biochemical and Biophysical Research Communications
, vol.74
, Issue.2
, pp. 650-655
-
-
Hunt, L.T.1
Dayhoff, M.O.2
-
119
-
-
77954834510
-
The current state of chromatin immunoprecipitation
-
Collas P. The current state of chromatin immunoprecipitation. Mol. Biotechnol. 45(1), 87-100 (2010).
-
(2010)
Mol. Biotechnol.
, vol.45
, Issue.1
, pp. 87-100
-
-
Collas, P.1
-
120
-
-
34548424709
-
Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells
-
DOI 10.1016/j.stem.2007.08.004, PII S1934590907001233
-
Zhao XD, Han X, Chew JL et al. Whole-genome mapping of histone H3 Lys4 and 27 trimethylations reveals distinct genomic compartments in human embryonic stem cells. Cell Stem Cell 1(3), 286-298 (2007). (Pubitemid 47370914)
-
(2007)
Cell Stem Cell
, vol.1
, Issue.3
, pp. 286-298
-
-
Zhao, X.D.1
Han, X.2
Chew, J.L.3
Liu, J.4
Chiu, K.P.5
Choo, A.6
Orlov, Y.L.7
Sung, W.-K.8
Shahab, A.9
Kuznetsov, V.A.10
Bourque, G.11
Oh, S.12
Ruan, Y.13
Ng, H.-H.14
Wei, C.-L.15
-
121
-
-
38649126918
-
Promoter CpG methylation contributes to ES cell gene regulation in parallel with Oct4/Nanog, PcG complex, and histone H3K4/K27 trimethylation
-
DOI 10.1016/j.stem.2007.12.011, PII S193459090700327X
-
Fouse SD, Shen Y, Pellegrini M et al. Promoter CpG methylation contributes to ES cell gene regulation in parallel with Oct4/Nanog, PcG complex, and histone H3K4/K27 trimethylation. Cell Stem Cell 2(2), 160-169 (2008). (Pubitemid 351168712)
-
(2008)
Cell Stem Cell
, vol.2
, Issue.2
, pp. 160-169
-
-
Fouse, S.D.1
Shen, Y.2
Pellegrini, M.3
Cole, S.4
Meissner, A.5
Van Neste, L.6
Jaenisch, R.7
Fan, G.8
-
122
-
-
70450217879
-
Human DNA methylomes at base resolution show widespread epigenomic differences
-
Lister R, Pelizzola M, Dowen RH et al. Human DNA methylomes at base resolution show widespread epigenomic differences. Nature 462(7271), 315-322 (2009).
-
(2009)
Nature
, vol.462
, Issue.7271
, pp. 315-322
-
-
Lister, R.1
Pelizzola, M.2
Dowen, R.H.3
-
123
-
-
77953809032
-
Distinct epigenomic landscapes of pluripotent and lineage-committed human cells
-
Hawkins R, Hon GC, K. Lee L et al. Distinct epigenomic landscapes of pluripotent and lineage-committed human cells Cell Stem Cell 6(5), 479-491 (2010).
-
(2010)
Cell Stem Cell
, vol.6
, Issue.5
, pp. 479-491
-
-
Hawkins, R.1
Hon, G.C.2
Lee L, K.3
-
124
-
-
77951855269
-
Quantitative mass spectrometry of histones h3.2 and h3.3 in suz12-deficient mouse embryonic stem cells reveals distinct, dynamic post-translational modifications at Lys-27 and Lys-36
-
Jung HR, Pasini D, Helin K, Jensen ON. Quantitative mass spectrometry of histones h3.2 and h3.3 in suz12-deficient mouse embryonic stem cells reveals distinct, dynamic post-translational modifications at Lys-27 and Lys-36. Mol. Cell Proteomics 9(5), 838-850 (2010).
-
(2010)
Mol. Cell Proteomics
, vol.9
, Issue.5
, pp. 838-850
-
-
Jung, H.R.1
Pasini, D.2
Helin, K.3
Jensen, O.N.4
-
125
-
-
33746298724
-
Quantitative proteomic analysis of post-translational modifications of human histones
-
DOI 10.1074/mcp.M600007-MCP200
-
Beck HC, Nielsen EC, Matthiesen R et al. Quantitative proteomic analysis of posttranslational modifications of human histones. Mol. Cell Proteomics 5(7), 1314-1325 (2006). (Pubitemid 44103401)
-
(2006)
Molecular and Cellular Proteomics
, vol.5
, Issue.7
, pp. 1314-1325
-
-
Beck, H.C.1
Nielsen, E.C.2
Matthiesen, R.3
Jensen, L.H.4
Sehested, M.5
Finn, P.6
Grauslund, M.7
Hansen, A.M.8
Jensen, O.N.9
-
126
-
-
33646899550
-
3 on a hybrid linear quadrupole ion trap-orbitrap mass spectrometer
-
DOI 10.1074/mcp.T500042-MCP200
-
Macek B, Waanders LF, Olsen JV, Mann M. Top-down protein sequencing and MS3 on a hybrid linear quadrupole ion trap-orbitrap mass spectrometer. Mol. Cell Proteomics 5(5), 949-958 (2006). (Pubitemid 43792803)
-
(2006)
Molecular and Cellular Proteomics
, vol.5
, Issue.5
, pp. 949-958
-
-
Macek, B.1
Waanders, L.F.2
Olsen, J.V.3
Mann, M.4
-
127
-
-
0000944563
-
Electron capture dissociation of multiply charged protein cations. A nonergodic process
-
Zubarev RA, Kelleher NL, McLafferty FW. Electron capture dissociation of multiply charged protein cations. A nonergodic process. J. Am. Chem. Soc. 120(13), 3265-3266 (1998).
-
(1998)
J. Am. Chem. Soc.
, vol.120
, Issue.13
, pp. 3265-3266
-
-
Zubarev, R.A.1
Kelleher, N.L.2
McLafferty, F.W.3
-
128
-
-
3042789073
-
Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry
-
DOI 10.1073/pnas.0402700101
-
Syka JEP, Coon JJ, Schroeder MJ, Shabanowitz J, Hunt DF. Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry. Proc. Natl Acad. Sci. USA 101(26), 9528-9533 (2004). (Pubitemid 38869270)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.26
, pp. 9528-9533
-
-
Syka, J.E.P.1
Coon, J.J.2
Schroeder, M.J.3
Shabanowitz, J.4
Hunt, D.F.5
-
129
-
-
0042670024
-
Protein mass analysis of histones
-
DOI 10.1016/S1046-2023(03)00082-3
-
Galasinski SC, Resing KA, Ahn NG. Protein mass analysis of histones. Methods 31(1), 3-11 (2003). (Pubitemid 36945165)
-
(2003)
Methods
, vol.31
, Issue.1
, pp. 3-11
-
-
Galasinski, S.C.1
Resing, K.A.2
Ahn, N.G.3
-
130
-
-
5644231221
-
Characterization of Tetrahymena histone H2B variants and posttranslational populations by Electron Capture Dissociation (ECD) Fourier Transform Ion Cyclotron Mass Spectrometry (FT-ICR MS)
-
DOI 10.1074/mcp.M400041-MCP200
-
Medzihradszky KF, Zhang X, Chalkley RJ et al. Characterization of Tetrahymena histone H2B variants and posttranslational populations by electron capture dissociation (ECD) Fourier transform ion cyclotron mass spectrometry (FT-ICR MS). Mol. Cell Proteomics 3(9), 872-886 (2004). (Pubitemid 39369200)
-
(2004)
Molecular and Cellular Proteomics
, vol.3
, Issue.9
, pp. 872-886
-
-
Medzihradszky, K.F.1
Zhang, X.2
Chalkley, R.J.3
Guan, S.4
McFarland, M.A.5
Chalmers, M.J.6
Marshall, A.G.7
Diaz, R.L.8
Allis, C.D.9
Burlingame, A.L.10
-
131
-
-
47249157351
-
Combinatorial modification of human histone H4 quantitated by two-dimensional liquid chromatography coupled with top down mass spectrometry
-
Pesavento JJ, Bullock CR, Leduc RD, Mizzen CA, Kelleher NL. Combinatorial modification of human histone H4 quantitated by two-dimensional liquid chromatography coupled with top down mass spectrometry. J. Biol. Chem. 283(22), 14927-14937 (2008).
-
(2008)
J. Biol. Chem.
, vol.283
, Issue.22
, pp. 14927-14937
-
-
Pesavento, J.J.1
Bullock, C.R.2
Leduc, R.D.3
Mizzen, C.A.4
Kelleher, N.L.5
-
132
-
-
41949086475
-
Mass spectrometry identifies and quantifies 74 unique histone H4 isoforms in differentiating human embryonic stem cells
-
DOI 10.1073/pnas.0710515105
-
Phanstiel D, Brumbaugh J, Berggren WT et al. Mass spectrometry identifies and quantifies 74 unique histone H4 isoforms in differentiating human embryonic stem cells. Proc. Natl Acad. Sci. USA 105(11), 4093-4098 (2008). (Pubitemid 351754340)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.11
, pp. 4093-4098
-
-
Phanstiel, D.1
Brumbaugh, J.2
Berggren, W.T.3
Conard, K.4
Feng, X.5
Levenstein, M.E.6
McAlister, G.C.7
Thomson, J.A.8
Coon, J.J.9
-
133
-
-
77951833317
-
High resolution electron transfer dissociation studies of unfractionated intact histones from murine embryonic stem cells using on-line capillary LC separation
-
Eliuk SM, Maltby D, Panning B, Burlingame AL. High resolution electron transfer dissociation studies of unfractionated intact histones from murine embryonic stem cells using on-line capillary LC separation. Mol. Cell Proteomics 9(5), 824-837 (2010).
-
(2010)
Mol. Cell Proteomics
, vol.9
, Issue.5
, pp. 824-837
-
-
Eliuk, S.M.1
Maltby, D.2
Panning, B.3
Burlingame, A.L.4
-
134
-
-
65249180173
-
An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency
-
Ho L, Ronan JL, Wu J et al. An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency. Proc. Natl Acad. Sci. USA 106(13), 5181-5186 (2009).
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.106
, Issue.13
, pp. 5181-5186
-
-
Ho, L.1
Ronan, J.L.2
Wu, J.3
-
135
-
-
77951821532
-
A lentiviral functional proteomics approach identifies chromatin remodeling complexes important for the induction of pluripotency
-
Mak AB, Ni Z, Hewel JA et al. A lentiviral functional proteomics approach identifies chromatin remodeling complexes important for the induction of pluripotency. Mol. Cell Proteomics 9(5), 811-823 (2010).
-
(2010)
Mol. Cell Proteomics
, vol.9
, Issue.5
, pp. 811-823
-
-
Mak, A.B.1
Ni, Z.2
Hewel, J.A.3
-
136
-
-
77149165069
-
Technologies for plasma membrane proteomics
-
Cordwell SJ, Thingholm TE. Technologies for plasma membrane proteomics. Proteomics 10(4), 611-627 (2010).
-
(2010)
Proteomics
, vol.10
, Issue.4
, pp. 611-627
-
-
Cordwell, S.J.1
Thingholm, T.E.2
-
137
-
-
57649146492
-
Stem cell markers: Insights from membrane proteomics?
-
Ahn SM, Goode RJA, Simpson RJ. Stem cell markers: insights from membrane proteomics? Proteomics 8(23-24), 4946-4957 (2008).
-
(2008)
Proteomics
, vol.8
, Issue.23-24
, pp. 4946-4957
-
-
Ahn, S.M.1
Rja, G.2
Simpson, R.J.3
-
138
-
-
3543023287
-
Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture
-
DOI 10.1038/nbt993
-
Durr E, Yu J, Krasinska KM et al. Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture. Nat. Biotechnol. 22(8), 985-992 (2004). (Pubitemid 39014475)
-
(2004)
Nature Biotechnology
, vol.22
, Issue.8
, pp. 985-992
-
-
Durr, E.1
Yu, J.2
Krasinska, K.M.3
Carver, L.A.4
Yates III, J.R.5
Testa, J.E.6
Oh, P.7
Schnitzer, J.E.8
-
139
-
-
27144498682
-
Plasma membrane-focused proteomics: Dramatic changes in surface expression during the maturation of human dendritic cells
-
DOI 10.1002/pmic.200401258
-
Watarai H, Hinohara A, Nagafune J, Nakayama T, Taniguchi M, Yamaguchi Y. Plasma membrane-focused proteomics: dramatic changes in surface expression during the maturation of human dendritic cells. Proteomics 5(15), 4001-4011 (2005). (Pubitemid 41502495)
-
(2005)
Proteomics
, vol.5
, Issue.15
, pp. 4001-4011
-
-
Watarai, H.1
Hinohara, A.2
Nagafune, J.3
Nakayama, T.4
Taniguchi, M.5
Yamaguchi, Y.6
-
140
-
-
33644841214
-
Integration of a two-phase partition method into proteomics research on rat liver plasma membrane proteins
-
DOI 10.1021/pr050387a
-
Cao R, Li X, Liu Z et al. Integration of a two-phase partition method into proteomics research on rat liver plasma membrane proteins. J. Proteome Res. 5(3), 634-642 (2006). (Pubitemid 43364104)
-
(2006)
Journal of Proteome Research
, vol.5
, Issue.3
, pp. 634-642
-
-
Cao, R.1
Li, X.2
Liu, Z.3
Peng, X.4
Hu, W.5
Wang, X.6
Chen, P.7
Xie, J.8
Liang, S.9
-
141
-
-
17444400484
-
Differential detergent fractionation for non-electrophoretic eukaryote cell proteomics
-
DOI 10.1021/pr049842d
-
McCarthy FM, Burgess SC, van den Berg BH, Koter MD, Pharr GT. Differential detergent fractionation for non-electrophoretic eukaryote cell proteomics. J. Proteome Res. 4(2), 316-324 (2005). (Pubitemid 40548135)
-
(2005)
Journal of Proteome Research
, vol.4
, Issue.2
, pp. 316-324
-
-
McCarthy, F.M.1
Burgess, S.C.2
Van Den Berg, B.H.J.3
Koter, M.D.4
Pharr, G.T.5
-
142
-
-
61849164561
-
Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry
-
Chen R, Jiang X, Sun D et al. Glycoproteomics analysis of human liver tissue by combination of multiple enzyme digestion and hydrazide chemistry. J. Proteome Res. 8(2), 651-661 (2009).
-
(2009)
J. Proteome Res.
, vol.8
, Issue.2
, pp. 651-661
-
-
Chen, R.1
Jiang, X.2
Sun, D.3
-
143
-
-
0038699625
-
Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry
-
DOI 10.1038/nbt827
-
Zhang H, Li XJ, Martin DB, Aebersold R. Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry. Nat. Biotechnol. 21(6), 660-666 (2003). (Pubitemid 36638093)
-
(2003)
Nature Biotechnology
, vol.21
, Issue.6
, pp. 660-666
-
-
Zhang, H.1
Li, X.-J.2
Martin, D.B.3
Aebersold, R.4
-
144
-
-
1842529218
-
Proteomic analysis of integral plasma membrane proteins
-
DOI 10.1021/ac0354037
-
Zhao Y, Zhang W, Kho Y. Proteomic analysis of integral plasma membrane proteins. Anal. Chem. 76(7), 1817-1823 (2004). (Pubitemid 38451494)
-
(2004)
Analytical Chemistry
, vol.76
, Issue.7
, pp. 1817-1823
-
-
Zhao, Y.1
Zhang, W.2
Kho, Y.3
Zhao, Y.4
-
145
-
-
55749112976
-
Membrane proteins and membrane proteomics
-
Tan S, Tan HT, Chung MC. Membrane proteins and membrane proteomics. Proteomics 8(19), 3924-3932 (2008).
-
(2008)
Proteomics
, vol.8
, Issue.19
, pp. 3924-3932
-
-
Tan, S.1
Tan, H.T.2
Chung, M.C.3
-
146
-
-
55749095513
-
Cell surface biomarkers of embryonic stem cells
-
Nagano K, Yoshida Y, Isobe T. Cell surface biomarkers of embryonic stem cells. Proteomics 8(19), 4025-4035 (2008).
-
(2008)
Proteomics
, vol.8
, Issue.19
, pp. 4025-4035
-
-
Nagano, K.1
Yoshida, Y.2
Isobe, T.3
-
147
-
-
29244447154
-
Cell surface labeling and mass spectrometry reveal diversity of cell surface markers and signaling molecules expressed in undifferentiated mouse embryonic stem cells
-
DOI 10.1074/mcp.M500216-MCP200
-
Nunomura K, Nagano K, Itagaki C et al. Cell surface labeling and mass spectrometry reveal diversity of cell surface markers and signaling molecules expressed in undifferentiated mouse embryonic stem cells. Mol. Cell Proteomics 4(12), 1968-1976 (2005). (Pubitemid 41830191)
-
(2005)
Molecular and Cellular Proteomics
, vol.4
, Issue.12
, pp. 1968-1976
-
-
Nunomura, K.1
Nagano, K.2
Itagaki, C.3
Masato, T.4
Okamura, N.5
Yamauchi, Y.6
Sugano, S.7
Takahashi, N.8
Izumi, T.9
Isobe, T.10
-
148
-
-
27144462628
-
Differential expression profiling of membrane proteins by quantitative proteomics in a human mesenchymal stem cell line undergoing osteoblast differentiation
-
DOI 10.1634/stemcells.2004-0372
-
Foster LJ, Zeemann PA, Li C, Mann M, Jensen ON, Kassem M. Differential expression profiling of membrane proteins by quantitative proteomics in a human mesenchymal stem cell line undergoing osteoblast differentiation. Stem Cells 23(9), 1367-1377 (2005). (Pubitemid 41504924)
-
(2005)
Stem Cells
, vol.23
, Issue.9
, pp. 1367-1377
-
-
Foster, L.J.1
Zeemann, P.A.2
Li, C.3
Mann, M.4
Jensen, O.N.5
Kassem, M.6
-
149
-
-
49149111510
-
Identification of a membrane proteomic signature for human embryonic stem cells independent of culture conditions
-
Harkness L, Christiansen H, Nehlin J, Barington T, Andersen JS, Kassem M. Identification of a membrane proteomic signature for human embryonic stem cells independent of culture conditions. Stem Cell Res. 1(3), 219-227 (2008).
-
(2008)
Stem Cell Res.
, vol.1
, Issue.3
, pp. 219-227
-
-
Harkness, L.1
Christiansen, H.2
Nehlin, J.3
Barington, T.4
Andersen, J.S.5
Kassem, M.6
-
150
-
-
59449101305
-
Proteomic analysis of membrane proteins expressed specifically in pluripotent murine embryonic stem cells
-
Intoh A, Kurisaki A, Yamanaka Y et al. Proteomic analysis of membrane proteins expressed specifically in pluripotent murine embryonic stem cells. Proteomics 9(1), 126-137 (2009).
-
(2009)
Proteomics
, vol.9
, Issue.1
, pp. 126-137
-
-
Intoh, A.1
Kurisaki, A.2
Yamanaka, Y.3
-
151
-
-
77949862634
-
Identification of cell surface proteins for antibody-based selection of human embryonic stem cell-derived cardiomyocytes
-
Van Hoof D, Dormeyer W, Braam SR et al. Identification of cell surface proteins for antibody-based selection of human embryonic stem cell-derived cardiomyocytes. J. Proteome Res. 9(3), 1610-1618 (2010).
-
(2010)
J. Proteome Res.
, vol.9
, Issue.3
, pp. 1610-1618
-
-
Van Hoof, D.1
Dormeyer, W.2
Braam, S.R.3
-
152
-
-
39149115929
-
Defining molecular cornerstomes during fibroblast to iPS cell reprogramming in mouse
-
Stadtfeld M, Maherali N, Breault DT, Hochedlinger K. Defining molecular cornerstomes during fibroblast to iPS cell reprogramming in mouse. Cell Stem Cell. 2(3), 230-240 (2008).
-
(2008)
Cell Stem Cell.
, vol.2
, Issue.3
, pp. 230-240
-
-
Stadtfeld, M.1
Maherali, N.2
Breault, D.T.3
Hochedlinger, K.4
-
153
-
-
15544383394
-
Embryonic stem cells: Prospects for developmental biology and cell therapy
-
DOI 10.1152/physrev.00054.2003
-
Wobus AM, Boheler KR. Embryonic stem cells: prospects for developmental biology and cell therapy. Physiol. Rev. 85(2), 635-678 (2005). (Pubitemid 40404638)
-
(2005)
Physiological Reviews
, vol.85
, Issue.2
, pp. 635-678
-
-
Wobus, A.M.1
Boheler, K.R.2
-
154
-
-
12144288049
-
Derivation of embryonic stem-cell lines from human blastocysts
-
DOI 10.1056/NEJMsr040330
-
Cowan CA, Klimanskaya I, McMahon J et al. Derivation of embryonic stem-cell lines from human blastocysts. N. Engl. J. Med. 350(13), 1353-1356 (2004). (Pubitemid 38375373)
-
(2004)
New England Journal of Medicine
, vol.350
, Issue.13
, pp. 1353-1356
-
-
Cowan, C.A.1
Klimanskaya, I.2
McMahon, J.3
Atienza, J.4
Witmyer, J.5
Zucker, J.P.6
Wang, S.7
Morton, C.C.8
McMahon, A.P.9
Powers, D.10
Melton, D.A.11
-
155
-
-
70549113220
-
Perspectives of targeted mass spectrometry for protein biomarker verification
-
Huttenhain R, Malmstrom J, Picotti P, Aebersold R. Perspectives of targeted mass spectrometry for protein biomarker verification. Curr. Opin. Chem. Biol. 13(5-6), 518-525 (2009).
-
(2009)
Curr. Opin. Chem. Biol.
, vol.13
, Issue.5-6
, pp. 518-525
-
-
Huttenhain, R.1
Malmstrom, J.2
Picotti, P.3
Aebersold, R.4
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