-
1
-
-
54049138064
-
Multiple specificity recognition motifs enhance plant mitochondrial RNA editing in vitro
-
D. Verbitskiy, J.A. van der Merwe, A. Zehrmann, A. Brennicke, and M. Takenaka Multiple specificity recognition motifs enhance plant mitochondrial RNA editing in vitro J. Biol. Chem. 283 2008 24374 24381
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 24374-24381
-
-
Verbitskiy, D.1
Van Der Merwe, J.A.2
Zehrmann, A.3
Brennicke, A.4
Takenaka, M.5
-
2
-
-
0029813034
-
In vivo dissection of cis-acting determinants for plastid RNA editing
-
R. Bock, M. Hermann, and H. Kössel In vivo dissection of cis-acting determinants for plastid RNA editing EMBO J. 15 1996 5052 5059 (Pubitemid 26315815)
-
(1996)
EMBO Journal
, vol.15
, Issue.18
, pp. 5052-5059
-
-
Bock, R.1
Hermann, M.2
Kossel, H.3
-
3
-
-
0030946854
-
Extraplastidic site-specific factors mediate RNA editing in chloroplasts
-
DOI 10.1093/emboj/16.11.3282
-
R. Bock, and H.U. Koop Extraplastidic site-specific factors mediate RNA editing in chloroplasts EMBO J. 16 1997 3282 3288 (Pubitemid 27234965)
-
(1997)
EMBO Journal
, vol.16
, Issue.11
, pp. 3282-3288
-
-
Bock, R.1
Koop, H.-U.2
-
4
-
-
0034802513
-
Cis recognition elements in plant mitochondrion RNA editing
-
DOI 10.1128/MCB.21.20.6731-6737.2001
-
J.-C. Farré, G. Leon, X. Jordana, and A. Araya Cis recognition elements in plant mitochondrion RNA editing Mol. Cell. Biol. 21 2001 6731 6737 (Pubitemid 32911235)
-
(2001)
Molecular and Cellular Biology
, vol.21
, Issue.20
, pp. 6731-6737
-
-
Farre, J.-C.1
Leon, G.2
Jordana, X.3
Araya, A.4
-
5
-
-
60949094475
-
Higher plant in organello systems as a model for RNA editing
-
F. Kempken, N. Bolle, and A. Bruhs Higher plant in organello systems as a model for RNA editing Endocyt. Cell Res. 19 2009 1 10
-
(2009)
Endocyt. Cell Res.
, vol.19
, pp. 1-10
-
-
Kempken, F.1
Bolle, N.2
Bruhs, A.3
-
6
-
-
25844481583
-
An in vitro RNA editing system from cauliflower mitochondria: Editing site recognition parameters can vary in different plant species
-
DOI 10.1261/rna.2740905
-
J. Neuwirt, M. Takenaka, J.A. van der Merwe, and A. Brennicke An in vitro RNA editing system from cauliflower mitochondria: editing site recognition parameters can vary in different plant species RNA 11 2005 1563 1570 (Pubitemid 41396926)
-
(2005)
RNA
, vol.11
, Issue.10
, pp. 1563-1570
-
-
Neuwirt, J.1
Takenaka, M.2
Van Der Merwe, J.A.3
Brennicke, A.4
-
7
-
-
29344467426
-
RNA editing sites in plant mitochondria can share cis-elements
-
DOI 10.1016/j.febslet.2005.12.011, PII S0014579305014687
-
J.A. van der Merwe, M. Takenaka, J. Neuwirt, D. Verbitskiy, and A. Brennicke RNA editing sites in plant mitochondria can share cis-elements FEBS Lett. 580 2006 268 272 (Pubitemid 43005348)
-
(2006)
FEBS Letters
, vol.580
, Issue.1
, pp. 268-272
-
-
Van Der Merwe, J.A.1
Takenaka, M.2
Neuwirt, J.3
Verbitskiy, D.4
Brennicke, A.5
-
8
-
-
0033965922
-
The PPR motif - A TPR-related motif prevalent in plant organellar proteins
-
PII S0968000499015200
-
I.D. Small, and N. Peeters The PPR motif - a TPR-related motif prevalent in plant organellar proteins Trends Biochem. Sci. 25 2000 46 47 (Pubitemid 30100363)
-
(2000)
Trends in Biochemical Sciences
, vol.25
, Issue.2
, pp. 46-47
-
-
Small, I.D.1
Peeters, N.2
-
9
-
-
56549095978
-
Pentatricopeptide repeat proteins: A socket set for organelle gene expression
-
C. Schmitz-Linneweber, and I. Small Pentatricopeptide repeat proteins: a socket set for organelle gene expression Trends Plant Sci. 13 2008 663 670
-
(2008)
Trends Plant Sci.
, vol.13
, pp. 663-670
-
-
Schmitz-Linneweber, C.1
Small, I.2
-
10
-
-
4043172772
-
Genome-wide analysis of arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis
-
DOI 10.1105/tpc.104.022236
-
C. Lurin, C. Andrés, S. Aubourg, M. Bellaoui, F. Bitton, C. Bruyre, M. Caboche, C. Debast, J.M. Gualberto, B. Hoffmann, A. Lecharny, M. Le Ret, M.-L. Martin-Magniette, H. Mireau, N. Peeters, J.-P. Renou, B. Szurek, L. Taconnat, and I.D. Small Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis Plant Cell 16 2004 2089 2103 (Pubitemid 39059730)
-
(2004)
Plant Cell
, vol.16
, Issue.8
, pp. 2089-2103
-
-
Lurin, C.1
Andres, C.2
Aubourg, S.3
Bellaoui, M.4
Bitton, F.5
Bruyere, C.6
Caboche, M.7
Debast, C.8
Gualberto, J.9
Hoffmann, B.10
Lecharny, A.11
Le Ret, M.12
Martin-Magniette, M.-L.13
Mireau, H.14
Peeters, N.15
Renou, J.-P.16
Szurek, B.17
Taconnat, L.18
Small, I.19
-
11
-
-
75949104310
-
MEF9, an E-subclass pentatricopeptide repeat protein, is required for an RNA editing event in the nad7 transcript in mitochondria of Arabidopsis
-
M. Takenaka MEF9, an E-subclass pentatricopeptide repeat protein, is required for an RNA editing event in the nad7 transcript in mitochondria of Arabidopsis Plant Physiol. 152 2009 939 947
-
(2009)
Plant Physiol.
, vol.152
, pp. 939-947
-
-
Takenaka, M.1
-
12
-
-
77956252019
-
Reverse genetic screening identifies five E-class PPR proteins involved in RNA editing in mitochondria of Arabidopsis thaliana
-
M. Takenaka, D. Verbitskiy, A. Zehrmann, and A. Brennicke Reverse genetic screening identifies five E-class PPR proteins involved in RNA editing in mitochondria of Arabidopsis thaliana J. Biol. Chem. 285 2010 27122 27129
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 27122-27129
-
-
Takenaka, M.1
Verbitskiy, D.2
Zehrmann, A.3
Brennicke, A.4
-
13
-
-
33747073483
-
A simple in vitro RNA editing assay for chloroplast transcripts using fluorescent dideoxynucleotides: Distinct types of sequence elements required for editing of ndh transcripts
-
DOI 10.1111/j.1365-313X.2006.02825.x
-
T. Sasaki, Y. Yukawa, T. Wakasugi, K. Yamada, and M. Sugiura A simple in vitro RNA editing assay for chloroplast transcripts using fluorescent dideoxynucleotides: distinct types of sequence elements required for editing of ndh transcripts Plant J. 47 2006 802 810 (Pubitemid 44215444)
-
(2006)
Plant Journal
, vol.47
, Issue.5
, pp. 802-810
-
-
Sasaki, T.1
Yukawa, Y.2
Wakasugi, T.3
Yamada, K.4
Sugiura, M.5
-
14
-
-
33645074681
-
RNA editing in plant organelles: Machinery, physiological function and evolution
-
T. Shikanai RNA editing in plant organelles: machinery, physiological function and evolution Cell. Mol. Life Sci. 63 2006 689 708
-
(2006)
Cell. Mol. Life Sci.
, vol.63
, pp. 689-708
-
-
Shikanai, T.1
-
15
-
-
12744253474
-
A pentatricopeptide repeat protein is essential for RNA editing in chloroplasts
-
E. Kotera, M. Tasaka, and T. Shikanai A pentatricopeptide repeat protein is essential for RNA editing in chloroplasts Nature 433 2005 326 330
-
(2005)
Nature
, vol.433
, pp. 326-330
-
-
Kotera, E.1
Tasaka, M.2
Shikanai, T.3
-
16
-
-
34249938871
-
Conserved domain structure of pentatricopeptide repeat proteins involved in chloroplast RNA editing
-
DOI 10.1073/pnas.0700865104
-
K. Okuda, R. Myouga, K. Motohashi, K. Shinozaki, and T. Shikanai Conserved domain structure of pentatricopeptide repeat proteins involved in chloroplast RNA editing Proc. Natl. Acad. Sci. USA 104 2007 8178 8183 (Pubitemid 47185895)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.19
, pp. 8178-8183
-
-
Okuda, K.1
Myouga, F.2
Motohashi, R.3
Shinozaki, K.4
Shikanai, T.5
-
17
-
-
62549149035
-
Pentatricopeptide repeat proteins with the DYW motif have distinct molecular functions in RNA editing and RNA cleavage in Arabidopsis chloroplasts
-
K. Okuda, A.-L. Chateigner-Boutin, T. Nakamura, E. Delannoy, M. Sugita, F. Myouga, R. Motohashi, K. Shinozaki, I. Small, and T. Shikanai Pentatricopeptide repeat proteins with the DYW motif have distinct molecular functions in RNA editing and RNA cleavage in Arabidopsis chloroplasts Plant Cell 21 2009 146 156
-
(2009)
Plant Cell
, vol.21
, pp. 146-156
-
-
Okuda, K.1
Chateigner-Boutin, A.-L.2
Nakamura, T.3
Delannoy, E.4
Sugita, M.5
Myouga, F.6
Motohashi, R.7
Shinozaki, K.8
Small, I.9
Shikanai, T.10
-
18
-
-
56049125182
-
CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts
-
A.-L. Chateigner-Boutin, M. Ramos-Vega, A. Guevara-Garcia, C. Andrés, M.d.l.L. Gutierrez-Nava, A. Cantero, E. Delannoy, L.F. Jimenez, C. Lurin, I.D. Small, and P. León CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts Plant J. 56 2008 590 602
-
(2008)
Plant J.
, vol.56
, pp. 590-602
-
-
Chateigner-Boutin, A.-L.1
Ramos-Vega, M.2
Guevara-Garcia, A.3
Andrés, C.4
Gutierrez-Nava, D.L.M.L.5
Cantero, A.6
Delannoy, E.7
Jimenez, L.F.8
Lurin, C.9
Small, I.D.10
León, P.11
-
19
-
-
63349084758
-
The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth
-
W. Zhou, Y. Cheng, A. Yap, A.-L. Chateigner-Boutin, E. Delannoy, K. Hammani, I. Small, and J. Huang The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth Plant J. 58 2009 82 96
-
(2009)
Plant J.
, vol.58
, pp. 82-96
-
-
Zhou, W.1
Cheng, Y.2
Yap, A.3
Chateigner-Boutin, A.-L.4
Delannoy, E.5
Hammani, K.6
Small, I.7
Huang, J.8
-
20
-
-
70349160461
-
AtECB2, a pentatricopeptide repeat protein, is required for chloroplast transcript accD RNA editing and early chloroplast biogenesis in Arabidopsis thaliana
-
Q.-B. Yu, Y. Jiang, K. Chong, and Z.-N. Yang AtECB2, a pentatricopeptide repeat protein, is required for chloroplast transcript accD RNA editing and early chloroplast biogenesis in Arabidopsis thaliana Plant J. 59 2009 1011 1023
-
(2009)
Plant J.
, vol.59
, pp. 1011-1023
-
-
Yu, Q.-B.1
Jiang, Y.2
Chong, K.3
Yang, Z.-N.4
-
21
-
-
64749105292
-
A DYW domain containing pentatricopeptide repeat protein is required for RNA editing at multiple sites in mitochondria of Arabidopsis thaliana
-
A. Zehrmann, J.A. van der Merwe, D. Verbitskiy, A. Brennicke, and M. Takenaka A DYW domain containing pentatricopeptide repeat protein is required for RNA editing at multiple sites in mitochondria of Arabidopsis thaliana Plant Cell 21 2009 558 567
-
(2009)
Plant Cell
, vol.21
, pp. 558-567
-
-
Zehrmann, A.1
Van Der Merwe, J.A.2
Verbitskiy, D.3
Brennicke, A.4
Takenaka, M.5
-
22
-
-
69249124548
-
Rice OGR1 encodes a pentatricopeptide repeat-DYW protein and is essential for RNA editing in mitochondria
-
S.-R. Kim, J.-I. Yang, S. Moon, C.-H. Ryu, K. An, J. Yim, and G. An Rice OGR1 encodes a pentatricopeptide repeat-DYW protein and is essential for RNA editing in mitochondria Plant J. 59 2009 738 749
-
(2009)
Plant J.
, vol.59
, pp. 738-749
-
-
Kim, S.-R.1
Yang, J.-I.2
Moon, S.3
Ryu, C.-H.4
An, K.5
Yim, J.6
An, G.7
-
23
-
-
75749152607
-
The PPR protein encoded by the lovastatin insensitive 1 gene is involved in RNA editing at three sites in mitochondria of Arabidopsis thaliana
-
D. Verbitskiy, A. Zehrmann, J.A. van der Merwe, A. Brennicke, and M. Takenaka The PPR protein encoded by the lovastatin insensitive 1 gene is involved in RNA editing at three sites in mitochondria of Arabidopsis thaliana Plant J. 61 2010 446 455
-
(2010)
Plant J.
, vol.61
, pp. 446-455
-
-
Verbitskiy, D.1
Zehrmann, A.2
Van Der Merwe, J.A.3
Brennicke, A.4
Takenaka, M.5
-
24
-
-
59649116355
-
Multiplex single base extension typing to identify nuclear genes required for RNA editing in plant organelles
-
M. Takenaka, and A. Brennicke Multiplex single base extension typing to identify nuclear genes required for RNA editing in plant organelles Nucleic Acids Res. 37 2009 e13
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 13
-
-
Takenaka, M.1
Brennicke, A.2
-
25
-
-
85020032400
-
RNA editing in plant mitochondria: Assays and biochemical approaches
-
M. Takenaka, and A. Brennicke RNA editing in plant mitochondria: assays and biochemical approaches Methods Enzymol. 424 2007 439 458
-
(2007)
Methods Enzymol.
, vol.424
, pp. 439-458
-
-
Takenaka, M.1
Brennicke, A.2
-
26
-
-
34447099171
-
Arabidopsis mesophyll protoplasts: A versatile cell system for transient gene expression analysis
-
DOI 10.1038/nprot.2007.199, PII NPROT.2007.199
-
S.-D. Yoo, Y.-H. Cho, and J. Sheen Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis Nat. Protoc. 2 2007 1565 1572 (Pubitemid 47028844)
-
(2007)
Nature Protocols
, vol.2
, Issue.7
, pp. 1565-1572
-
-
Yoo, S.-D.1
Cho, Y.-H.2
Sheen, J.3
-
27
-
-
0029989864
-
Sequences directing C to U editing of the plastid psbL mRNA ape located within a 22 nucleotide segment spanning the editing site
-
S. Chaudhuri, and P. Maliga Sequences directing C to U editing of the plastid psbL mRNA are located within a 22 nucleotide segment spanning the editing site EMBO J. 15 1996 5958 5964 (Pubitemid 26375517)
-
(1996)
EMBO Journal
, vol.15
, Issue.21
, pp. 5958-5964
-
-
Chaudhuri, S.1
Maliga, P.2
-
28
-
-
0036784578
-
Recognition of RNA editing sites is directed by unique proteins in chloroplasts: Biochemical identification of cis-acting elements and trans-acting factors involved in RNA editing in tobacco and pea chloroplasts
-
T. Miyamoto, J. Obokata, and M. Sugiura Recognition of RNA editing sites is directed by unique proteins in chloroplasts: biochemical identification of cis-acting elements and trans-acting factors involved in RNA editing in tobacco and pea chloroplasts Mol. Cell. Biol. 22 2002 6726 6734
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 6726-6734
-
-
Miyamoto, T.1
Obokata, J.2
Sugiura, M.3
-
29
-
-
0027434086
-
Evolutionary relationships among group II intron-encoded proteins and identification of a conserved domain that may be related to maturase function
-
G. Mohr, P.S. Perlman, and A.M. Lambowitz Evolutionary relationship among group II intron-encoded proteins and identification of a conserved domain that may be related to maturase function Nucl. Acids Res. 22 1993 4991 4997 (Pubitemid 23342504)
-
(1993)
Nucleic Acids Research
, vol.21
, Issue.22
, pp. 4991-4997
-
-
Mohr, G.1
Perlman, P.S.2
Lambowitz, A.M.3
-
30
-
-
78649799498
-
Natural variation in Arabidopsis leads to the identification of REME1, a pentatricopeptide repeat-DYW protein controlling the editing of mitochondrial transcripts
-
S. Bentolila, W. Knight, and M. Hanson Natural variation in Arabidopsis leads to the identification of REME1, a pentatricopeptide repeat-DYW protein controlling the editing of mitochondrial transcripts Plant Physiol. 154 2010 1966 1982
-
(2010)
Plant Physiol.
, vol.154
, pp. 1966-1982
-
-
Bentolila, S.1
Knight, W.2
Hanson, M.3
|