-
1
-
-
0025657408
-
Population biology and epidimology of Peudomonas syringae
-
Hirano S.S., Upper C.D. Population biology and epidimology of Peudomonas syringae. Annu Rev Phytopathol 1990, 28:155-177.
-
(1990)
Annu Rev Phytopathol
, vol.28
, pp. 155-177
-
-
Hirano, S.S.1
Upper, C.D.2
-
2
-
-
40249113894
-
The life history of the plant pathogen Pseudomonas syringae is linked to the water cycle
-
Morris C.E., Sands D.C., Vinatzer B.A., Glaux C., Guilbaud C., Buffiere A., Yan S., Dominguez H., Thompson B.M. The life history of the plant pathogen Pseudomonas syringae is linked to the water cycle. ISME J 2008, 2:321-334.
-
(2008)
ISME J
, vol.2
, pp. 321-334
-
-
Morris, C.E.1
Sands, D.C.2
Vinatzer, B.A.3
Glaux, C.4
Guilbaud, C.5
Buffiere, A.6
Yan, S.7
Dominguez, H.8
Thompson, B.M.9
-
3
-
-
79551680560
-
Inferring the evolutionary history of the plant pathogen Pseudomonas syringae from its biogeography in headwaters of rivers in North America, Europe, and New Zealand
-
Morris C.E., Sands D.C., Vanneste J.L., Montarry J., Oakley B., Guilbaud C., Glaux C. Inferring the evolutionary history of the plant pathogen Pseudomonas syringae from its biogeography in headwaters of rivers in North America, Europe, and New Zealand. MBio 2010, 1:e00107-00110.
-
(2010)
MBio
, vol.1
-
-
Morris, C.E.1
Sands, D.C.2
Vanneste, J.L.3
Montarry, J.4
Oakley, B.5
Guilbaud, C.6
Glaux, C.7
-
4
-
-
33845423150
-
Surprising niche for the plant pathogen Pseudomonas syringae
-
Morris C.E., Kinkel L.L., Xiao K., Prior P., Sands D.C. Surprising niche for the plant pathogen Pseudomonas syringae. Infect Genet Evol 2007, 7:84-92.
-
(2007)
Infect Genet Evol
, vol.7
, pp. 84-92
-
-
Morris, C.E.1
Kinkel, L.L.2
Xiao, K.3
Prior, P.4
Sands, D.C.5
-
5
-
-
1642319596
-
Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen
-
Sarkar S.F., Guttman D.S. Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen. Appl Environ Microbiol 2004, 70:1999-2012.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 1999-2012
-
-
Sarkar, S.F.1
Guttman, D.S.2
-
6
-
-
25144466838
-
Phylogenetic characterization of virulence and resistance phenotypes of Pseudomonas syringae
-
Hwang M.S.H., Morgan R.L., Sarkar S.F., Wang P.W., Guttman D.S. Phylogenetic characterization of virulence and resistance phenotypes of Pseudomonas syringae. Appl Environ Microbiol 2005, 71:5182-5191.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 5182-5191
-
-
Hwang, M.S.H.1
Morgan, R.L.2
Sarkar, S.F.3
Wang, P.W.4
Guttman, D.S.5
-
7
-
-
75749111012
-
Pseudomonas syringae strains naturally lacking the classical P. syringae hrp/hrc locus are common leaf colonizers equipped with an atypical type III secretion system
-
Clarke C.R., Cai R., Studholme D.J., Guttman D.S., Vinatzer B.A. Pseudomonas syringae strains naturally lacking the classical P. syringae hrp/hrc locus are common leaf colonizers equipped with an atypical type III secretion system. Mol Plant Microbe Interact 2010, 23:198-210.
-
(2010)
Mol Plant Microbe Interact
, vol.23
, pp. 198-210
-
-
Clarke, C.R.1
Cai, R.2
Studholme, D.J.3
Guttman, D.S.4
Vinatzer, B.A.5
-
8
-
-
0041335630
-
The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000
-
Buell C.R., Joardar V., Lindeberg M., Selengut J., Paulsen I.T., Gwinn M.L., Dodson R.J., Deboy R.T., Durkin A.S., Kolonay J.F., et al. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Proc Natl Acad Sci U S A 2003, 100:10181-10186.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 10181-10186
-
-
Buell, C.R.1
Joardar, V.2
Lindeberg, M.3
Selengut, J.4
Paulsen, I.T.5
Gwinn, M.L.6
Dodson, R.J.7
Deboy, R.T.8
Durkin, A.S.9
Kolonay, J.F.10
-
9
-
-
23344451933
-
Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000
-
Feil H., Feil W.S., Chain P., Larimer F., DiBartolo G., Copeland A., Lykidis A., Trong S., Nolan M., Goltsman E., et al. Comparison of the complete genome sequences of Pseudomonas syringae pv. syringae B728a and pv. tomato DC3000. Proc Natl Acad Sci U S A 2005, 102:11064-11069.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 11064-11069
-
-
Feil, H.1
Feil, W.S.2
Chain, P.3
Larimer, F.4
DiBartolo, G.5
Copeland, A.6
Lykidis, A.7
Trong, S.8
Nolan, M.9
Goltsman, E.10
-
10
-
-
24944453122
-
Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition
-
Joardar V., Lindeberg M., Jackson R.W., Selengut J., Dodson R., Brinkac L.M., Daugherty S.C., DeBoy R., Durkin A.S., Giglio M.G., et al. Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. J Bacteriol 2005, 187:6488-6498.
-
(2005)
J Bacteriol
, vol.187
, pp. 6488-6498
-
-
Joardar, V.1
Lindeberg, M.2
Jackson, R.W.3
Selengut, J.4
Dodson, R.5
Brinkac, L.M.6
Daugherty, S.C.7
DeBoy, R.8
Durkin, A.S.9
Giglio, M.G.10
-
11
-
-
70449669121
-
The targeting of plant cellular systems by injected type III effector proteins
-
Lewis J.D., Guttman D.S., Desveaux D. The targeting of plant cellular systems by injected type III effector proteins. Semin Cell Dev Biol 2009, 20:1055-1063.
-
(2009)
Semin Cell Dev Biol
, vol.20
, pp. 1055-1063
-
-
Lewis, J.D.1
Guttman, D.S.2
Desveaux, D.3
-
12
-
-
58149284564
-
A draft genome sequence of Pseudomonas syringae pv. tomato T1 reveals a type III effector repertoire significantly divergent from that of Pseudomonas syringae pv. tomato DC3000
-
Almeida N.F., Yan S., Lindeberg M., Studholme D.J., Schneider D.J., Condon B., Liu H., Viana C.J., Warren A., Evans C., et al. A draft genome sequence of Pseudomonas syringae pv. tomato T1 reveals a type III effector repertoire significantly divergent from that of Pseudomonas syringae pv. tomato DC3000. Mol Plant Microbe Interact 2009, 22:52-62.
-
(2009)
Mol Plant Microbe Interact
, vol.22
, pp. 52-62
-
-
Almeida, N.F.1
Yan, S.2
Lindeberg, M.3
Studholme, D.J.4
Schneider, D.J.5
Condon, B.6
Liu, H.7
Viana, C.J.8
Warren, A.9
Evans, C.10
-
13
-
-
58149291658
-
De novo assembly of the Pseudomonas syringae pv. syringae B728a genome using Illumina/Solexa short sequence reads
-
Farrer R.A., Kemen E., Jones J.D.G., Studholme D.J. De novo assembly of the Pseudomonas syringae pv. syringae B728a genome using Illumina/Solexa short sequence reads. FEMS Microbiol Lett 2009, 291:103-111.
-
(2009)
FEMS Microbiol Lett
, vol.291
, pp. 103-111
-
-
Farrer, R.A.1
Kemen, E.2
Jones, J.D.G.3
Studholme, D.J.4
-
14
-
-
59949090259
-
De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae
-
Reinhardt J.A., Baltrus D.A., Nishimura M.T., Jeck W.R., Jones C.D., DanglF J.L. De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae. Genome Res 2009, 19:294-305.
-
(2009)
Genome Res
, vol.19
, pp. 294-305
-
-
Reinhardt, J.A.1
Baltrus, D.A.2
Nishimura, M.T.3
Jeck, W.R.4
Jones, C.D.5
DanglF, J.L.6
-
15
-
-
70349577932
-
A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528
-
Studholme D.J., Gimenez Ibanez S., MacLean D., Dangl J.L., Chang J.H., Rathjen J.P. A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528. BMC Genomics 2009, 10:395.
-
(2009)
BMC Genomics
, vol.10
, pp. 395
-
-
Studholme, D.J.1
Gimenez Ibanez, S.2
MacLean, D.3
Dangl, J.L.4
Chang, J.H.5
Rathjen, J.P.6
-
16
-
-
77956324972
-
Comparative genome analysis provides insights into the evolution and adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum
-
Green S., Studholme D.J., Laue B.E., Dorati F., Lovell H., Arnold D., Cottrell J.E., Bridgett S., Blaxter M., Huitema E., et al. Comparative genome analysis provides insights into the evolution and adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum. PLoS ONE 2010, 5:e10224.
-
(2010)
PLoS ONE
, vol.5
-
-
Green, S.1
Studholme, D.J.2
Laue, B.E.3
Dorati, F.4
Lovell, H.5
Arnold, D.6
Cottrell, J.E.7
Bridgett, S.8
Blaxter, M.9
Huitema, E.10
-
17
-
-
77957938106
-
Annotation and overview of the Pseudomonas savastanoi pv. savastanoi NCPPB 3335 draft genome reveals the virulence gene complement of a tumour-inducing pathogen of woody hosts
-
Rodríguez-Palenzuela P., Matas I.M., Murillo J., López-Solanilla E., Bardaji L., Perez-Martinez I., Rodriguez-Moskera M.E., Penyalver R., Lopez M.M., Quesada J.M., et al. Annotation and overview of the Pseudomonas savastanoi pv. savastanoi NCPPB 3335 draft genome reveals the virulence gene complement of a tumour-inducing pathogen of woody hosts. Environ Microbiol 2010, 12:1604-1620.
-
(2010)
Environ Microbiol
, vol.12
, pp. 1604-1620
-
-
Rodríguez-Palenzuela, P.1
Matas, I.M.2
Murillo, J.3
López-Solanilla, E.4
Bardaji, L.5
Perez-Martinez, I.6
Rodriguez-Moskera, M.E.7
Penyalver, R.8
Lopez, M.M.9
Quesada, J.M.10
-
18
-
-
77949511368
-
Pebble and Rock Band: heuristic resolution of repeats and scaffolding in the Velvet short-read de novo assembler
-
Zerbino D.R., McEwan G.K., Margulies E.H., Birney E. Pebble and Rock Band: heuristic resolution of repeats and scaffolding in the Velvet short-read de novo assembler. PLoS One 2009, 4:e8407.
-
(2009)
PLoS One
, vol.4
-
-
Zerbino, D.R.1
McEwan, G.K.2
Margulies, E.H.3
Birney, E.4
-
19
-
-
46449109082
-
Roadmap to new virulence determinants in Pseudomonas syringae: insights from comparative genomics and genome organization
-
Lindeberg M., Myers C.R., Collmer A., Schneider D.J. Roadmap to new virulence determinants in Pseudomonas syringae: insights from comparative genomics and genome organization. Mol Plant Microbe Interact 2008, 21:685-700.
-
(2008)
Mol Plant Microbe Interact
, vol.21
, pp. 685-700
-
-
Lindeberg, M.1
Myers, C.R.2
Collmer, A.3
Schneider, D.J.4
-
20
-
-
59249089471
-
Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths
-
Touchon M., Hoede C., Tenaillon O., Barbe V., Baeriswyl S., Bidet P., Bingen E., Bonacorsi S., Bouchier C., Bouvet O., et al. Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. PLoS Genet 2009, 5:e1000344.
-
(2009)
PLoS Genet
, vol.5
-
-
Touchon, M.1
Hoede, C.2
Tenaillon, O.3
Barbe, V.4
Baeriswyl, S.5
Bidet, P.6
Bingen, E.7
Bonacorsi, S.8
Bouchier, C.9
Bouvet, O.10
-
21
-
-
31444432605
-
The biosynthetic gene cluster for the b-lactam antibiotic tabtoxin in Pseudomonas syringae
-
Kinscherf T.G., Willis D.K. The biosynthetic gene cluster for the b-lactam antibiotic tabtoxin in Pseudomonas syringae. J Antibiot (Tokyo) 2005, 58:817-821.
-
(2005)
J Antibiot (Tokyo)
, vol.58
, pp. 817-821
-
-
Kinscherf, T.G.1
Willis, D.K.2
-
22
-
-
29044432423
-
Exposure to host resistance mechanisms drives evolution of bacterial virulence in plants
-
Pitman A.R., Jackson R.W., Mansfield J.W., Kaitell V., Thwaites R., Arnold D.L. Exposure to host resistance mechanisms drives evolution of bacterial virulence in plants. Curr Biol 2005, 15:2230-2235.
-
(2005)
Curr Biol
, vol.15
, pp. 2230-2235
-
-
Pitman, A.R.1
Jackson, R.W.2
Mansfield, J.W.3
Kaitell, V.4
Thwaites, R.5
Arnold, D.L.6
-
23
-
-
33845249292
-
Protein delivery into eukaryotic cells by type III secretion machines
-
Galán J.E., Wolf-Watz H. Protein delivery into eukaryotic cells by type III secretion machines. Nature 2006, 444:567-573.
-
(2006)
Nature
, vol.444
, pp. 567-573
-
-
Galán, J.E.1
Wolf-Watz, H.2
-
24
-
-
0034712731
-
The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in plants
-
Alfano J.R., Charkowski A.O., Deng W.-L., Badel J.L., Petnicki-Ocwieja T., van Dijk K., Collmer A. The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in plants. Proc Natl Acad Sci U S A 2000, 97:4856-4861.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 4856-4861
-
-
Alfano, J.R.1
Charkowski, A.O.2
Deng, W.-L.3
Badel, J.L.4
Petnicki-Ocwieja, T.5
van Dijk, K.6
Collmer, A.7
-
25
-
-
15244360776
-
Proposed guidelines for a unified nomenclature and phylogenetic analysis of type III Hop effector proteins in the plant pathogen Pseudomonas syringae
-
Lindeberg M., Stavrinides J., Chang J.H., Alfano J.R., Collmer A., Dangl J.L., Greenberg J.T., Mansfield J.W., Guttman D.S. Proposed guidelines for a unified nomenclature and phylogenetic analysis of type III Hop effector proteins in the plant pathogen Pseudomonas syringae. Mol Plant Microbe Interact 2005, 18:275-282.
-
(2005)
Mol Plant Microbe Interact
, vol.18
, pp. 275-282
-
-
Lindeberg, M.1
Stavrinides, J.2
Chang, J.H.3
Alfano, J.R.4
Collmer, A.5
Dangl, J.L.6
Greenberg, J.T.7
Mansfield, J.W.8
Guttman, D.S.9
-
26
-
-
77953170391
-
Two virulence determinants of type III effector AvrPto are functionally conserved in diverse Pseudomonas syringae pathovars
-
Nguyen H.P., Yeam I., Angot A., Martin G.B. Two virulence determinants of type III effector AvrPto are functionally conserved in diverse Pseudomonas syringae pathovars. New Phytol 2010, 187:969-982.
-
(2010)
New Phytol
, vol.187
, pp. 969-982
-
-
Nguyen, H.P.1
Yeam, I.2
Angot, A.3
Martin, G.B.4
-
27
-
-
0000297774
-
Bacteria expressing avirulence gene D produce a specific elicitor of the soybean hypersensitive reaction
-
Keen N.T., Tamaki S., Kobayashi D., Gerhold D., Stayton M., Shen H., Gold S., Lorang J., Thordal-Christensen H., Dahlbeck D., et al. Bacteria expressing avirulence gene D produce a specific elicitor of the soybean hypersensitive reaction. Mol Plant Microbe Interact 1990, 3:112-121.
-
(1990)
Mol Plant Microbe Interact
, vol.3
, pp. 112-121
-
-
Keen, N.T.1
Tamaki, S.2
Kobayashi, D.3
Gerhold, D.4
Stayton, M.5
Shen, H.6
Gold, S.7
Lorang, J.8
Thordal-Christensen, H.9
Dahlbeck, D.10
-
28
-
-
33749648101
-
Contribution of alginate and levan production to biofilm formation by Pseudomonas syringae
-
Laue H., Schenk A., Li H., Lambertsen L., Neu T.R., Molin S., Ullrich M.S. Contribution of alginate and levan production to biofilm formation by Pseudomonas syringae. Microbiology 2006, 152:2909-2918.
-
(2006)
Microbiology
, vol.152
, pp. 2909-2918
-
-
Laue, H.1
Schenk, A.2
Li, H.3
Lambertsen, L.4
Neu, T.R.5
Molin, S.6
Ullrich, M.S.7
-
29
-
-
0032811649
-
Involvement of the exopolysaccharide alginate in the virulence and epiphytic fitness of Pseudomonas syringae pv. syringae
-
Yu J., Peñaloza-Vázquez A., Chakrabarty A.M., Bender C.L. Involvement of the exopolysaccharide alginate in the virulence and epiphytic fitness of Pseudomonas syringae pv. syringae. Mol Microbiol 1999, 33:712-720.
-
(1999)
Mol Microbiol
, vol.33
, pp. 712-720
-
-
Yu, J.1
Peñaloza-Vázquez, A.2
Chakrabarty, A.M.3
Bender, C.L.4
-
30
-
-
0032213608
-
Characterization of type IV pilus genes in Pseudomonas syringae pv. tomato DC3000
-
Roine E., Raineri D.M., Romantschuk M., Wilson M., Nunn D.N. Characterization of type IV pilus genes in Pseudomonas syringae pv. tomato DC3000. Mol Plant Microbe Interact 1998, 11:1048-1056.
-
(1998)
Mol Plant Microbe Interact
, vol.11
, pp. 1048-1056
-
-
Roine, E.1
Raineri, D.M.2
Romantschuk, M.3
Wilson, M.4
Nunn, D.N.5
-
31
-
-
0029795374
-
The b-ketoadipate pathway and the biology of self-identity
-
Harwood C.S., Parales R.E. The b-ketoadipate pathway and the biology of self-identity. Annu Rev Microbiol 1996, 50:553-590.
-
(1996)
Annu Rev Microbiol
, vol.50
, pp. 553-590
-
-
Harwood, C.S.1
Parales, R.E.2
-
32
-
-
0037423746
-
Complete nucleotide sequence of carbazole/dioxin-degrading plasmid pCAR1 in Pseudomonas resinovorans strain CA10 indicates its mosaicity and the presence of large catabolic transposon Tn4676
-
Maeda K., Nojiri H., Shintani M., Yoshida T., Habe H., Omori T. Complete nucleotide sequence of carbazole/dioxin-degrading plasmid pCAR1 in Pseudomonas resinovorans strain CA10 indicates its mosaicity and the presence of large catabolic transposon Tn4676. J Mol Biol 2003, 326:21-33.
-
(2003)
J Mol Biol
, vol.326
, pp. 21-33
-
-
Maeda, K.1
Nojiri, H.2
Shintani, M.3
Yoshida, T.4
Habe, H.5
Omori, T.6
-
33
-
-
0028851013
-
Discontinuities in the evolution of Pseudomonas putida cat genes
-
Houghton J.E., Brown T.M., Appel A.J., Hughes E.J., Ornston L.N. Discontinuities in the evolution of Pseudomonas putida cat genes. J Bacteriol 1995, 177:401-412.
-
(1995)
J Bacteriol
, vol.177
, pp. 401-412
-
-
Houghton, J.E.1
Brown, T.M.2
Appel, A.J.3
Hughes, E.J.4
Ornston, L.N.5
-
34
-
-
77749330016
-
PAMDB, a multilocus sequence typing and analysis database and website for plant-associated microbes
-
Almeida N.F., Yan S., Cai R., Clarke C.R., Morris C.E., Schaad N.W., Schuenzel E.L., Lacy G.H., Sun X., Jones J.B., et al. PAMDB, a multilocus sequence typing and analysis database and website for plant-associated microbes. Phytopathology 2010, 100:208-215.
-
(2010)
Phytopathology
, vol.100
, pp. 208-215
-
-
Almeida, N.F.1
Yan, S.2
Cai, R.3
Clarke, C.R.4
Morris, C.E.5
Schaad, N.W.6
Schuenzel, E.L.7
Lacy, G.H.8
Sun, X.9
Jones, J.B.10
-
35
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S., Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 2003, 52:696-704.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
36
-
-
0034489715
-
Mutational analysis of the Arabidopsis nucleotide binding site-leucine-rich repeat resistance gene RPS2
-
Tao Y., Yuan F.H., Leister R.T., Ausubel F.M., Katagiri F. Mutational analysis of the Arabidopsis nucleotide binding site-leucine-rich repeat resistance gene RPS2. Plant Cell 2000, 12:2541-2554.
-
(2000)
Plant Cell
, vol.12
, pp. 2541-2554
-
-
Tao, Y.1
Yuan, F.H.2
Leister, R.T.3
Ausubel, F.M.4
Katagiri, F.5
-
37
-
-
33745256005
-
Approximate likelihood-ratio test for branches: a fast, accurate, and powerful alternative
-
Anisimova M., Gascuel O. Approximate likelihood-ratio test for branches: a fast, accurate, and powerful alternative. Syst Biol 2006, 55:539-552.
-
(2006)
Syst Biol
, vol.55
, pp. 539-552
-
-
Anisimova, M.1
Gascuel, O.2
|