메뉴 건너뛰기




Volumn 115, Issue 2, 2011, Pages 157-168

Oogonial biometry and phylogenetic analyses of the Pythium vexans species group from woody agricultural hosts in South Africa reveal distinct groups within this taxon

Author keywords

tubulin; Cox I; Cox II; ITS; Oogonial biometry; Phytopythium vexans; Pythium vexans; Taxonomy

Indexed keywords

FUNGAL DNA; FUNGAL PROTEIN;

EID: 79551683694     PISSN: 18786146     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.funbio.2010.11.005     Document Type: Article
Times cited : (26)

References (39)
  • 4
    • 38849202384 scopus 로고    scopus 로고
    • A multi-locus phylogeny for Phytophthora utilizing markers derived from complete genome sequences
    • Blair J.E., Coffey M.D., Park S.-Y., Geiser D.M., Kang S. A multi-locus phylogeny for Phytophthora utilizing markers derived from complete genome sequences. Fungal Genetics and Biology 2007, 45:266-277.
    • (2007) Fungal Genetics and Biology , vol.45 , pp. 266-277
    • Blair, J.E.1    Coffey, M.D.2    Park, S.-Y.3    Geiser, D.M.4    Kang, S.5
  • 5
    • 6344220063 scopus 로고    scopus 로고
    • Phytophthora alni sp. nov. and its variants: designation of emerging heteroploid hybrid pathogens spreading on Alnus trees
    • Brasier C.M., Kirk S.A., Delcan J., Cooke D.E.L., Jung T., Man in't Veld W.A. Phytophthora alni sp. nov. and its variants: designation of emerging heteroploid hybrid pathogens spreading on Alnus trees. Mycological Research 2004, 108:1172-1184.
    • (2004) Mycological Research , vol.108 , pp. 1172-1184
    • Brasier, C.M.1    Kirk, S.A.2    Delcan, J.3    Cooke, D.E.L.4    Jung, T.5    Man in't Veld, W.A.6
  • 6
    • 33748765638 scopus 로고
    • Fruit rot of Trichosanthes dioica L. caused by Pythium cucurbitacearum Takimoto in West Bengal
    • Chaudhuri S. Fruit rot of Trichosanthes dioica L. caused by Pythium cucurbitacearum Takimoto in West Bengal. Current Science 1975, 44:68.
    • (1975) Current Science , vol.44 , pp. 68
    • Chaudhuri, S.1
  • 7
    • 0031462219 scopus 로고    scopus 로고
    • Phylogenetic analysis of Phytophthora species based on ITS1 and ITS2 sequences of the ribosomal RNA gene repeat
    • Cooke D.E., Duncan J.M. Phylogenetic analysis of Phytophthora species based on ITS1 and ITS2 sequences of the ribosomal RNA gene repeat. Mycological Research 1997, 101:667-677.
    • (1997) Mycological Research , vol.101 , pp. 667-677
    • Cooke, D.E.1    Duncan, J.M.2
  • 9
    • 79551682867 scopus 로고
    • Keys to Pythium. Published by the author, Reading
    • Dick MW, 1990. Keys to Pythium. Published by the author, Reading.
    • (1990)
    • Dick, M.W.1
  • 10
    • 0012138529 scopus 로고
    • Several species of Pythium peculiar in their sexual development
    • Drechsler C. Several species of Pythium peculiar in their sexual development. Phytopathology 1946, 36:781-864.
    • (1946) Phytopathology , vol.36 , pp. 781-864
    • Drechsler, C.1
  • 12
    • 0000344335 scopus 로고
    • The nature of sexuality in Phytophthora infestans
    • Galindo J., Gallegly M.E. The nature of sexuality in Phytophthora infestans. Phytopathology 1960, 50:123-128.
    • (1960) Phytopathology , vol.50 , pp. 123-128
    • Galindo, J.1    Gallegly, M.E.2
  • 13
    • 22744459023 scopus 로고    scopus 로고
    • Distinct species exist within the Cercospora apii morphotype
    • Groenewald M., Groenewald J.Z., Crous P.W. Distinct species exist within the Cercospora apii morphotype. Phytopathology 2005, 95:951-959.
    • (2005) Phytopathology , vol.95 , pp. 951-959
    • Groenewald, M.1    Groenewald, J.Z.2    Crous, P.W.3
  • 14
    • 45949107473 scopus 로고    scopus 로고
    • Recent developments in the MAFFT sequence alignment program
    • Katoh K., Toh H. Recent developments in the MAFFT sequence alignment program. Bioinformatics 2008, 9:286-298.
    • (2008) Bioinformatics , vol.9 , pp. 286-298
    • Katoh, K.1    Toh, H.2
  • 15
    • 34249650217 scopus 로고    scopus 로고
    • Intra-isolate heterogeneity of the ITS region of rDNA in Pythium helicoides
    • Kageyama K., Senda M., Asano T., Suga H., Ishiguro K. Intra-isolate heterogeneity of the ITS region of rDNA in Pythium helicoides. Mycological Research 2007, 111:416-423.
    • (2007) Mycological Research , vol.111 , pp. 416-423
    • Kageyama, K.1    Senda, M.2    Asano, T.3    Suga, H.4    Ishiguro, K.5
  • 18
    • 0000856986 scopus 로고
    • Isolation of DNA from fungal mycelia and single spores
    • Academic Press, NY, USA, M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.)
    • Lee S.B., Taylor J.W. Isolation of DNA from fungal mycelia and single spores. PCR Protocols: a guide to methods and applications 1990, 282-287. Academic Press, NY, USA. M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.).
    • (1990) PCR Protocols: a guide to methods and applications , pp. 282-287
    • Lee, S.B.1    Taylor, J.W.2
  • 19
    • 13444305471 scopus 로고    scopus 로고
    • Molecular phylogeny and taxonomy of the genus Pythium
    • Lévesque C.A., De Cock A.W.A.M. Molecular phylogeny and taxonomy of the genus Pythium. Mycological Research 2004, 108:1363-1383.
    • (2004) Mycological Research , vol.108 , pp. 1363-1383
    • Lévesque, C.A.1    De Cock, A.W.A.M.2
  • 20
    • 79551685119 scopus 로고    scopus 로고
    • Molecular phylogeny, barcoding and ecology of Pythium species. (Abstr.). In: 3rd International Workshop on Phytophthora/Pythium and Related Genera, Turin, Italy
    • Lévesque CA, Robideau GP, Désaulniers N, Bala K, Chen W, Tambong JT, 2008. Molecular phylogeny, barcoding and ecology of Pythium species. (Abstr.). In: 3rd International Workshop on Phytophthora/Pythium and Related Genera, Turin, Italy.
    • (2008)
    • Lévesque, C.A.1    Robideau, G.P.2    Désaulniers, N.3    Bala, K.4    Chen, W.5    ambong, J.T.6
  • 21
    • 0010837105 scopus 로고    scopus 로고
    • Phylogenetic relationships among some Pythium species inferred from sequence analysis of the mitochondrially encoded cytochrome oxidase II gene
    • Martin F.N. Phylogenetic relationships among some Pythium species inferred from sequence analysis of the mitochondrially encoded cytochrome oxidase II gene. Mycologia 2000, 92:711-727.
    • (2000) Mycologia , vol.92 , pp. 711-727
    • Martin, F.N.1
  • 22
    • 0037656232 scopus 로고    scopus 로고
    • Phylogenetic relationships among Phytophthora species inferred from sequence analysis of the mitochondrially encoded cytochrome oxidase I and II genes
    • Martin F.N., Tooley P.W. Phylogenetic relationships among Phytophthora species inferred from sequence analysis of the mitochondrially encoded cytochrome oxidase I and II genes. Mycologia 2003, 95:269-284.
    • (2003) Mycologia , vol.95 , pp. 269-284
    • Martin, F.N.1    Tooley, P.W.2
  • 23
    • 0033566564 scopus 로고    scopus 로고
    • Phylogenetic relationships of Pythium species based on ITS and 5.8S sequences of the ribosomal DNA
    • Matsumoto C., Kageyama K., Suga H., Hyakumachi M. Phylogenetic relationships of Pythium species based on ITS and 5.8S sequences of the ribosomal DNA. Mycoscience 1999, 40:321-331.
    • (1999) Mycoscience , vol.40 , pp. 321-331
    • Matsumoto, C.1    Kageyama, K.2    Suga, H.3    Hyakumachi, M.4
  • 25
    • 17344384843 scopus 로고    scopus 로고
    • Biometry of oospores and intraspecific variation of four Pythium species
    • Møller K., Hockenhull J. Biometry of oospores and intraspecific variation of four Pythium species. Mycological Research 2001, 105:1206-1215.
    • (2001) Mycological Research , vol.105 , pp. 1206-1215
    • Møller, K.1    Hockenhull, J.2
  • 27
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F., Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2003, 19:1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 28
    • 38249013185 scopus 로고
    • Biometry of oospores and oogonia of Pythium (Oomycetes): the independent taxonomic value of calculated ratios
    • Shahzad S., Coe R., Dick M.W. Biometry of oospores and oogonia of Pythium (Oomycetes): the independent taxonomic value of calculated ratios. Botanical Journal of the Linnean Society 1992, 108:143-165.
    • (1992) Botanical Journal of the Linnean Society , vol.108 , pp. 143-165
    • Shahzad, S.1    Coe, R.2    Dick, M.W.3
  • 29
    • 0000898845 scopus 로고
    • An analysis of variance test for normality (complete samples)
    • Shapiro S.S., Wilk M.B. An analysis of variance test for normality (complete samples). Biometrika 1965, 52:591-611.
    • (1965) Biometrika , vol.52 , pp. 591-611
    • Shapiro, S.S.1    Wilk, M.B.2
  • 31
    • 79551683077 scopus 로고    scopus 로고
    • Occurrence of Pythium spp. on apple orchards in Tunisia. (Abstr.). In: 3rd International Workshop on Phytophthora/Pythium and Related Genera, Turin, Italy
    • Souli M, Boughalleb N, Alvarez L, Abad-Campos P, 2008. Occurrence of Pythium spp. on apple orchards in Tunisia. (Abstr.). In: 3rd International Workshop on Phytophthora/Pythium and Related Genera, Turin, Italy.
    • (2008)
    • Souli, M.1    Boughalleb, N.2    Alvarez, L.3    Abad-Campos, P.4
  • 32
    • 79551690111 scopus 로고    scopus 로고
    • Characterisation and detection of the Pythium and Phytophthora species associated with grapevines in South Africa. PhD dissertation, University of Stellenbosch, Stellenbosch, South Africa
    • Spies CFJ, 2010. Characterisation and detection of the Pythium and Phytophthora species associated with grapevines in South Africa. PhD dissertation, University of Stellenbosch, Stellenbosch, South Africa.
    • (2010)
    • Spies, C.F.J.1
  • 33
    • 79551684403 scopus 로고    scopus 로고
    • Characterisation of the Pythium vexans species complex from fruit crops in South Africa. In: 46th SASPP Congress, Gordon's Bay, South Africa (25-28 January)
    • Spies CFJ, Mazzola M, Botha WJ, Koopman TA, Meitz J, Paarwater H, Mostert L, McLeod A, 2009. Characterisation of the Pythium vexans species complex from fruit crops in South Africa. In: 46th SASPP Congress, Gordon's Bay, South Africa (25-28 January).
    • (2009)
    • Spies, C.F.J.1    Mazzola, M.2    Botha, W.J.3    Koopman, T.A.4    Meitz, J.5    Paarwater, H.6    Mostert, L.7    McLeod, A.8
  • 34
    • 79551683278 scopus 로고
    • On the Pythium causing damping-off of seedling and fruit rot of cucumber
    • Takimoto S. On the Pythium causing damping-off of seedling and fruit rot of cucumber. Annals of the Phytopathological Society of Japan 1941, 11:89-91.
    • (1941) Annals of the Phytopathological Society of Japan , vol.11 , pp. 89-91
    • Takimoto, S.1
  • 35
    • 79551681191 scopus 로고    scopus 로고
    • Characterization of fungi (Fusarium and Rhizoctonia) and oomycetes (Phytophthora and Pythium) associated with apple orchards in South Africa
    • (accepted)
    • Tewoldemedhin Y.T., Mazzola M., Botha W.J., Spies C.F.J., McLeod A. Characterization of fungi (Fusarium and Rhizoctonia) and oomycetes (Phytophthora and Pythium) associated with apple orchards in South Africa. European Journal of Plant Pathology 2010, (accepted).
    • (2010) European Journal of Plant Pathology
    • Tewoldemedhin, Y.T.1    Mazzola, M.2    Botha, W.J.3    Spies, C.F.J.4    McLeod, A.5
  • 37
    • 67650840573 scopus 로고    scopus 로고
    • Phylogenetic relationships of Pythium and Phytophthora species based on ITS rDNA, cytochrome oxidase II and β-tubulin gene sequences
    • Villa N.O., Kageyama K., Suga H. Phylogenetic relationships of Pythium and Phytophthora species based on ITS rDNA, cytochrome oxidase II and β-tubulin gene sequences. Mycologia 2006, 98:410-422.
    • (2006) Mycologia , vol.98 , pp. 410-422
    • Villa, N.O.1    Kageyama, K.2    Suga, H.3
  • 38
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • Academic Press, New York, M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.)
    • White T.J., Burns T., Lee S., Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols: a guide to methods and applications 1990, 315-322. Academic Press, New York. M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.).
    • (1990) PCR Protocols: a guide to methods and applications , pp. 315-322
    • White, T.J.1    Burns, T.2    Lee, S.3    Taylor, J.4
  • 39
    • 0028055696 scopus 로고
    • Inheritance of mitochondrial DNA in Phytophthora infestans
    • Whittaker S.L., Assinder S.J., Shaw D.S. Inheritance of mitochondrial DNA in Phytophthora infestans. Mycological Research 1994, 98:569-575.
    • (1994) Mycological Research , vol.98 , pp. 569-575
    • Whittaker, S.L.1    Assinder, S.J.2    Shaw, D.S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.