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Volumn 6, Issue 2, 2011, Pages 175-186

Absolute quantification of protein and post-translational modification abundance with stable isotope-labeled synthetic peptides

Author keywords

[No Author keywords available]

Indexed keywords

CARBON 13; NITROGEN 15; OXYGEN 18; POLO LIKE KINASE 1; PROTON; SYNTHETIC PEPTIDE; THREONINE;

EID: 79551662220     PISSN: 17542189     EISSN: 17502799     Source Type: Journal    
DOI: 10.1038/nprot.2010.196     Document Type: Article
Times cited : (127)

References (23)
  • 1
    • 0036583926 scopus 로고    scopus 로고
    • Stable isotope labeling by amino acids in cell culture silac as a simple and accurate approach to expression proteomics
    • Ong, S.E. et al. Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol. Cell Proteomics 1, 376-86 (2002).
    • (2002) Mol. Cell Proteomics , vol.1 , pp. 376-86
    • Ong, S.E.1
  • 2
    • 0032875697 scopus 로고    scopus 로고
    • Quantitative analysis of complex protein mixtures using isotope-coded affinity tags
    • Gygi, S.P. et al. Quantitative analysis of complex protein mixtures using isotope-coded affinity tags. Nat. Biotechnol. 17, 994-9 (1999).
    • (1999) Nat. Biotechnol. , vol.17 , pp. 994-999
    • Gygi, S.P.1
  • 3
    • 19944432197 scopus 로고    scopus 로고
    • Multiplexed protein quantitation in saccharomyces cerevisiae using amine-reactive isobaric tagging reagents
    • Ross, P.L. et al. Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol. Cell. Proteomics 3, 1154-1169 (2004).
    • (2004) Mol. Cell. Proteomics , vol.3 , pp. 1154-1169
    • Ross, P.L.1
  • 4
    • 0037795741 scopus 로고    scopus 로고
    • Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS
    • USA
    • Gerber, S.A., Rush, J., Stemman, O., Kirschner, M.W. & Gygi, S.P. Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS. Proc. Natl. Acad. Sci. USA 100, 6940-6945 (2003).
    • (2003) Proc. Natl. Acad. Sci. , vol.100 , pp. 6940-6945
    • Gerber, S.A.1    Rush, J.2    Stemman, O.3    Kirschner, M.W.4    Gygi, S.P.5
  • 5
    • 23144442824 scopus 로고    scopus 로고
    • Multiplexed absolute quantification in proteomics using artificial qcat proteins of concatenated signature peptides
    • Beynon, R.J., Doherty, M.K., Pratt, J.M. & Gaskell, S.J. Multiplexed absolute quantification in proteomics using artificial QCAT proteins of concatenated signature peptides. Nat. Methods 2, 587-589 (2005).
    • (2005) Nat. Methods , vol.2 , pp. 587-589
    • Beynon, R.J.1    Doherty, M.K.2    Pratt, J.M.3    Gaskell, S.J.4
  • 6
    • 33847179916 scopus 로고    scopus 로고
    • Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by qconcat genes
    • Pratt, J.M. et al. Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by QconCAT genes. Nat. Protoc. 1, 1029-1043 (2006).
    • (2006) Nat. Protoc. , vol.1 , pp. 1029-1043
    • Pratt, J.M.1
  • 7
    • 66149182998 scopus 로고    scopus 로고
    • Mass spectrometry-based absolute quantification of microsomal cytochrome P450 2D6 in human liver
    • Langenfeld, E., Zanger, U.M., Jung, K., Meyer, H.E. & Marcus, K. Mass spectrometry-based absolute quantification of microsomal cytochrome P450 2D6 in human liver. Proteomics 9, 2313-2323 (2009).
    • (2009) Proteomics , vol.9 , pp. 2313-2323
    • Langenfeld, E.1    Zanger, U.M.2    Jung, K.3    Meyer, H.E.4    Marcus, K.5
  • 8
    • 33745621292 scopus 로고    scopus 로고
    • Absolute quantification of multisite phosphorylation by selective reaction monitoring mass spectrometry: Determination of inhibitory phosphorylation status of cyclin-dependent kinases
    • Mayya, V., Rezual, K., Wu, L., Fong, M.B. & Han, D.K. Absolute quantification of multisite phosphorylation by selective reaction monitoring mass spectrometry: determination of inhibitory phosphorylation status of cyclin-dependent kinases. Mol. Cell. Proteomics 5, 1146-1157 (2006).
    • (2006) Mol. Cell. Proteomics , vol.5 , pp. 1146-1157
    • Mayya, V.1    Rezual, K.2    Wu, L.3    Fong, M.B.4    Han, D.K.5
  • 9
    • 33745742269 scopus 로고    scopus 로고
    • Quantitative analysis of in vitro ubiquitinated cyclin B1 reveals complex chain topology
    • Kirkpatrick, D.S. et al. Quantitative analysis of in vitro ubiquitinated cyclin B1 reveals complex chain topology. Nat. Cell Biol. 8, 700-710 (2006).
    • (2006) Nat. Cell Biol. , vol.8 , pp. 700-710
    • Kirkpatrick, D.S.1
  • 10
    • 63049125531 scopus 로고    scopus 로고
    • Quantitative proteomics reveals the function of unconventional ubiquitin chains in proteasomal degradation
    • Xu, P. et al. Quantitative proteomics reveals the function of unconventional ubiquitin chains in proteasomal degradation. Cell 137, 133-145 (2009).
    • (2009) Cell , vol.137 , pp. 133-145
    • Xu, P.1
  • 11
    • 43049127826 scopus 로고    scopus 로고
    • Peptideatlas: A resource for target selection for emerging targeted proteomics workflows
    • Deutsch, E.W., Lam, H. & Aebersold, R. PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows. EMBO Rep. 9, 429-434 (2008).
    • (2008) EMBO Rep. , vol.9 , pp. 429-434
    • Deutsch, E.W.1    Lam, H.2    Aebersold, R.3
  • 12
    • 38949210266 scopus 로고    scopus 로고
    • Human proteinpedia enables sharing of human protein data
    • Mathivanan, S. et al. Human Proteinpedia enables sharing of human protein data. Nat. Biotechnol. 26, 164-167 (2008).
    • (2008) Nat. Biotechnol. , vol.26 , pp. 164-167
    • Mathivanan, S.1
  • 13
    • 33644875983 scopus 로고    scopus 로고
    • Pride: A public repository of protein and peptide identifications for the proteomics community
    • Jones, P. et al. PRIDE: a public repository of protein and peptide identifications for the proteomics community. Nucleic Acids Res. 34, D659-D663 (2006).
    • (2006) Nucleic Acids Res. , vol.34
    • Jones, P.1
  • 14
    • 33846133955 scopus 로고    scopus 로고
    • Computational prediction of proteotypic peptides for quantitative proteomics
    • Mallick, P. et al. Computational prediction of proteotypic peptides for quantitative proteomics. Nat. Biotechnol. 25, 125-131 (2007).
    • (2007) Nat. Biotechnol. , vol.25 , pp. 125-131
    • Mallick, P.1
  • 15
    • 74049131716 scopus 로고    scopus 로고
    • High-throughput generation of selected reaction-monitoring assays for proteins and proteomes
    • Picotti, P. et al. High-throughput generation of selected reaction-monitoring assays for proteins and proteomes. Nat. Methods 7, 43-46 (2010).
    • (2010) Nat. Methods , vol.7 , pp. 43-46
    • Picotti, P.1
  • 16
    • 77951965920 scopus 로고    scopus 로고
    • Skyline: An open source document editor for creating and analyzing targeted proteomics experiments
    • MacLean, B. et al. Skyline: an open source document editor for creating and analyzing targeted proteomics experiments. Bioinformatics 26, 966-968 (2010).
    • (2010) Bioinformatics , vol.26 , pp. 966-968
    • MacLean, B.1
  • 17
    • 79953295549 scopus 로고    scopus 로고
    • Loss of dicer in sertoli cells has a major impact on the testicular proteome of mice
    • Published online; 10.1074/mcp.M900587-MCP200 13 May
    • Papaioannou, M.D. et al. Loss of Dicer in Sertoli cells has a major impact on the testicular proteome of mice. Mol. Cell Proteomics Published online; doi:10.1074/mcp.M900587-MCP200 (13 May 2010).
    • (2010) Mol. Cell Proteomics
    • Papaioannou, M.D.1
  • 18
    • 0035861914 scopus 로고    scopus 로고
    • Dual inhibition of sister chromatid separation at metaphase
    • Stemmann, O., Zou, H., Gerber, S.A., Gygi, S.P. & Kirschner, M.W. Dual inhibition of sister chromatid separation at metaphase. Cell 107, 715-726 (2001).
    • (2001) Cell , vol.107 , pp. 715-726
    • Stemmann, O.1    Zou, H.2    Gerber, S.A.3    Gygi, S.P.4    Kirschner, M.W.5
  • 19
    • 0031051218 scopus 로고    scopus 로고
    • Prognostic significance of polo-like kinase PLK expression in non-small cell lung cancer
    • Wolf, G. et al. Prognostic significance of polo-like kinase (PLK) expression in non-small cell lung cancer. Oncogene 14, 543-549 (1997).
    • (1997) Oncogene , vol.14 , pp. 543-549
    • Wolf, G.1
  • 20
    • 46249084662 scopus 로고    scopus 로고
    • Bora and the kinase aurora a cooperatively activate the kinase Plk1 and control mitotic entry
    • Seki, A., Coppinger, J.A., Jang, C.Y., Yates, J.R. & Fang, G. Bora and the kinase Aurora a cooperatively activate the kinase Plk1 and control mitotic entry. Science 320, 1655-1658 (2008).
    • (2008) Science , vol.320 , pp. 1655-1658
    • Seki, A.1    Coppinger, J.A.2    Jang, C.Y.3    Yates, J.R.4    Fang, G.5
  • 21
    • 51349144633 scopus 로고    scopus 로고
    • Polo-like kinase-1 is activated by aurora a to promote checkpoint recovery
    • Macurek, L. et al. Polo-like kinase-1 is activated by aurora A to promote checkpoint recovery. Nature 455, 119-123 (2008).
    • (2008) Nature , vol.455 , pp. 119-123
    • Macurek, L.1
  • 22
    • 77951644400 scopus 로고    scopus 로고
    • Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis
    • Olsen, J.V. et al. Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis. Sci. Signal. 3, ra3 (2010).
    • (2010) Sci. Signal. , vol.3
    • Olsen, J.V.1
  • 23
    • 4344574540 scopus 로고    scopus 로고
    • Large-scale characterization of hela cell nuclear phosphoproteins
    • USA
    • Beausoleil, S.A. et al. Large-scale characterization of HeLa cell nuclear phosphoproteins. Proc. Natl. Acad. Sci. USA 101, 12130-12135 (2004).
    • (2004) Proc. Natl. Acad. Sci. , vol.101 , pp. 12130-12135
    • Beausoleil, S.A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.