Positional cloning of the s haplotype determining the floral and incompatibility phenotype of the long-styled morph of distylous Turnera subulata

Molecular Genetics and Genomics

Volumn 285, Issue 2, 2011, Pages 101-111

  Labonne, Jonathan D J ^a   Shore, Joel S ^a  

^a YORK UNIVERSITY   (Canada)

Author keywords

BAC contig; Distyly; Heterostyly; Positional cloning; s haplotype; S locus

Indexed keywords

ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; CONTIG MAPPING; CONTROLLED STUDY; DNA FLANKING REGION; FLOWER; GENE DELETION; GENE SEQUENCE; GENETIC INCOMPATIBILITY; GENETIC POLYMORPHISM; GENETIC RECOMBINATION; HAPLOTYPE; MOLECULAR CLONING; PLANT GENETICS; PRIORITY JOURNAL; TURNERA; TURNERA SUBULATA;

CLONING, MOLECULAR; FLOWERS; HAPLOTYPES; MUTATION; PHENOTYPE; TURNERA;

TURNERA SUBULATA;

EID: 79551590058     PISSN: 16174615     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00438-010-0590-z     Document Type: Article

References (49)

1. MD Abramoff PJ Magelhaes SJ Ram 2004 Image processing with ImageJ Biophotonics Int 11 36 42
2. J Aii M Nagano S Kawasaki T Adachi 2004 Centromeric location of the S-locus in buckwheat Fagopyrum 21 21 25
3. MA Anderson EC Cornish S-L Mau EG Willliams R Hoggart A Atkinson I Bonig B Grego R Simpson PJ Roche JD Haley JD Penschow HD Niall GW Tregear JP Coghlan RJ Crawford AE Clarke 1986 Cloning of cDNA for a stylar glycoprotein associated with expression of self-incompatibility in Nicotiana alata Nature 321 38 44 1:CAS:528:DyaL28XltV2ksLY%3D 10.1038/321038a0
4. Barrett SCH (1992) The evolution and function of heterostyly. Springer, Berlin
5. Barrett SCH, Shore JS (2008) New insights on heterostyly: comparative biology, ecology and genetics. In: Franklin-Tong VE (ed) Self-incompatibility in flowering plants: evolution, diversity and mechanisms. Springer, Berlin, pp 3-32
6. W Bateson RP Gregory 1905 On the inheritance of heterostylism in Primula Proc R Soc Lond Ser B 76 581 586 10.1098/rspb.1905.0049
7. D Bernacchi SD Tanksley 1997 An interspecific backcross of Lycopersicon esculentum × L. hirsutum: linkage analysis and a QTL study of sexual compatibility factors and floral traits Genetics 147 861 877 1:CAS:528:DyaK2sXmslOqsLg%3D 9335620
8. DC Boyes ME Nasrallah J Vrebalov JB Nasrallah 1997 The self-incompatibility (S) haplotypes of Brassica contain highly divergent and rearranged sequences of ancient origin Plant Cell 9 237 247 1:CAS:528: DyaK2sXhslGrsL4%3D 10.1105/tpc.9.2.237 9061954
9. CE Coleman T-H Kao 1992 The flanking regions of two Petunia inflata S alleles are heterozygous and contain repetitive sequences Plant Mol Biol 18 725 737 1:CAS:528:DyaK3sXitVKgsL8%3D 10.1007/BF00020014 1558946
10. Y Cui N Brugière L Jackman Y-M Bi S Rothstein 1999 Structural and transcriptional comparative analysis of the S locus regions in two self-incompatible Brassica napus lines Plant Cell 11 2217 2231 1:CAS:528:DyaK1MXnsl2rsbw%3D 10.1105/tpc.11.11.2217 10559445
11. Darwin C (1877) The different forms of flowers on plants of the same species. Murray, London
12. D De Winton JBS Haldane 1935 The genetics of Primula sinensis. III. Linkage in the diploid J Genet 31 68 100 10.1007/BF02982281
13. VPJ Dowrick 1956 Heterostyly and homostyly in Primula obconica Heredity 10 219 236 10.1038/hdy.1956.19
14. R Dulberger 1974 Structural dimorphism of stigmatic papillae in distylous Linum species Am J Bot 61 238 243 10.2307/2441602
15. T Entani M Iwano H Shiba S Takayama K Fukui A Isogai 1999 Centromeric localization of an S-RNase gene in Petunia hybrid Vilm Theor Appl Genet 99 391 397 1:CAS:528:DyaK1MXmsVKlu7k%3D 10.1007/s001220051249
16. A Ernst 1955 Self-fertility in monomorphic Primulas Genetica 27 391 448 10.1007/BF01664170
17. HCC Foote JP Ride VE Franklin-Tong EA Walker Z Lawrence CH Franklin 1994 Cloning and expression of a distinctive class of self-incompatibility (S) gene from Papaver rhoeas L PNAS 91 2265 2269 1:CAS:528:DyaK2cXkt12nsLs%3D 10.1073/pnas.91.6.2265 8134385
18. FR Ganders 1979 The biology of heterostyly N Z J Bot 17 607 635
19. PM Gilmartin J Li 2010 Delineation of the S-locus in Turnera subulata-Homing in on Heterostyly Heredity 105 161 162 1:STN:280: DC%2BC3cnos1SmtA%3D%3D 10.1038/hdy.2010.69 20531446
20. EL Golynskaya NV Bashkirova NN Tomchuk 1976 Phytohemagglutinins of the pistils in Primula as possible proteins of generative incompatibility, Sov Plant Physiol 23 169 176
21. JDJ Labonne AJ Hilliker JS Shore 2007 Meiotic recombination in Turnera (Turneraceae): extreme sexual difference in rates, but no evidence for recombination suppression associated with the distyly S-locus Heredity 98 411 418 1:CAS:528:DC%2BD2sXlsFOiurw%3D 17375125
22. JDJ Labonne A Vaisman JS Shore 2008 Construction of a first genetic map of distylous Turnera and a fine-scale map of the S-locus region Genome 51 471 478 1:CAS:528:DC%2BD1cXntVahtbs%3D 10.1139/G08-031 18545271
23. JDJ Labonne A Goultiaeva JS Shore 2009 High-resolution mapping of the S-locus in Turnera leads to the discovery of three genes tightly associated with the S-alleles Mol Genet Genomics 281 673 685 1:CAS:528:DC%2BD1MXmtlKhtLg%3D 10.1007/s00438-009-0439-5 19283410
24. JDJ Labonne F Tamari JS Shore 2010 Characterization of X-ray-generated floral mutants carrying deletions at the S-locus of distylous Turnera subulata Heredity 105 235 243 1:CAS:528:DC%2BC3cXptVCks7w%3D 10.1038/hdy.2010.39 20389308
25. Lewis D, Jones DA (1992) The genetics of heterostyly. In: Barrett SCH (ed) Evolution and function of heterostyly. Springer, Berlin, pp 129-150
26. J Li M Webster M Furuya PM Gilmartin 2007 Identification and characterization of pin and thrum alleles of two genes that co-segregate with the Primula S-locus Plant J 51 18 31 1:CAS:528:DC%2BD2sXotVyru74%3D 10.1111/j.1365-313X.2007.03125.x 17561923
27. Lloyd DG, Webb CJ (1992) The evolution of heterostyly. In: Barrett SCH (ed) Evolution and function of heterostyly. Springer, Berlin, pp 151-178
28. IW Manfield VK Pavlov J Li HE Cook F Hummel PM Gilmartin 2005 Molecular characterization of DNA sequences from the Primula vulgaris S-locus J Exp Bot 56 1177 1188 1:CAS:528:DC%2BD2MXisVGqs7g%3D 10.1093/jxb/eri110 15723823
29. K Mather 1950 The genetical architecture of heterostyly in Primula sinensis Evolution 4 340 352 10.2307/2405601
30. DP Matton S-L Mau S Okamoto AE Clarke E Newbigin 1995 The S-locus of Nicotiana alata: genomic organization and sequence analysis of two S-RNase alleles Plant Mol Biol 28 847 858 1:CAS:528:DyaK2MXnslOns7s%3D 10.1007/BF00042070 7640357
31. McCubbin AG (2008) Heteromorphic self-incompatibility in Primula: twenty-first century tools promise to unravel a classic nineteeth century model system. In: Franklin-Tong VE (ed) Self-incompatibility in flowering plants: evolution, diversity and mechanisms. Springer, Berlin, pp 289-308
32. AG McCubbin C Lee A Hetrick 2006 Identification of genes showing differential expression between morphs in developing flowers of Primula vulgaris Sex Plant Reprod 19 63 72 1:CAS:528:DC%2BD28XjsVektr0%3D 10.1007/s00497-006- 0022-8
33. M Nagano J Aii C Campbell T Adachi S Kawasaki 2005 Construction of a BAC library for the investigation of the S locus in Buckwheat Fagopyrum 22 13 20 1:CAS:528:DC%2BD2sXks1antLw%3D
34. DG Peterson JP Tompkins DA Frisch DA Frisch RA Wing AH Paterson 2002 Construction of plant bacterial artificial chromosome (BAC) libraries: an illustrated guide J Agric Genomics 5 1 100
35. Richards AJ (1993) Primula. Batsford, London
36. Rozen S, Skaletsky HL (2000) Primer3 on the WWW for general users and for biologist programmers. In: Krawetz S, Misener S (eds) Bioinformatics methods and protocols: methods in molecular biology. Humana Press, Totowa, pp 365-386
37. SAS Institute Inc (2004) SAS 9.1.3 help and documentation. SAS Institute Inc, Cary
38. CR Schopfer ME Nasrallah JB Nasrallah 1999 The male determinant of self-incompatibility in Brassica Science 286 1697 1700 1:CAS:528: DyaK1MXnslKnsbc%3D 10.1126/science.286.5445.1697 10576728
39. H Shiba M Kenmochi M Sugihara M Iwano S Kawasaki G Suzuki M Watanabe A Isogai S Takayama 2003 Genomic organization of the S-locus region of Brassica Biosci Biotechnol Biochem 67 622 626 1:CAS:528:DC%2BD3sXivFKqu70%3D 10.1271/bbb.67.622 12723613
40. KR Shivanna J Heslop-Harrison Y Heslop-Harrison 1981 Heterostyly in Primula. 2. Sites of pollen inhibition, and effects of pistil constituents on compatible and incompatible pollen-tube growth Protoplasma 107 319 337 10.1007/BF01276833
41. JS Shore SCH Barrett 1985 Genetics of distyly and homostyly in the Turnera ulmifolia complex (Turneraceae) Heredity 55 167 174 10.1038/hdy.1985.88
42. JS Shore MM Arbo A Fernandez 2006 Breeding system variation, genetics and evolution in the Turneraceae New Phytol 171 539 551 1:CAS:528: DC%2BD28XpsVertb0%3D 16866957
43. P Sijacic X Wang AL Skirpan Y Wang PE Dowd AG McCubbin S Huang T-H Kao 2004 Identification of the pollen determinant of S-RNase-mediated self-incompatibility Nature 429 302 305 1:CAS:528:DC%2BD2cXktVOqtb0%3D 10.1038/nature02523 15152253
44. JC Stein B Howlett DC Boyes ME Nasrallah JB Nasrallah 1991 Molecular cloning of a putative receptor protein kinase gene encoded at the self-incompatibility locus of Brassica oleracea PNAS 88 8816 8820 1:CAS:528:DyaK38XmtVKisL8%3D 10.1073/pnas.88.19.8816 1681543
45. CP Vieira D Charlesworth J Vieira 2003 Evidence for rare recombination at the gametophytic self-incompatibility locus Heredity 91 262 267 1:CAS:528:DC%2BD3sXms1Cqsr4%3D 10.1038/sj.hdy.6800326 12939627
46. 2-RNase Plant Mol Biol 54 727 742 1:CAS:528:DC%2BD2cXptlCrtLk%3D 10.1023/B:PLAN.0000040901. 98982.82 15356391
47. 1 locus J Exp Bot 54 131 139 1:CAS:528:DC%2BD3sXlt1Krsw%3D%3D 10.1093/jxb/54.380.131 12456763
48. MJ Wheeler BHJ Graaf N Hadjiosif RM Perry NS Poulter K Osman S Vatovec A Harper FCH Franklin VE Franklin-Tong 2009 Identification of the pollen incompatibility determinant in Papaver rhoeas Nature 459 992 995 1:CAS:528:DC%2BD1MXms1aks7Y%3D 10.1038/nature08027 19483678
49. Y Yasui M Mori D Matsumoto O Ohnishi CG Campbell T Ota 2008 Construction of a BAC library for buckwheat genome research-an application to positional cloning of agriculturally valuable traits Genes Genet Syst 83 393 401 1:CAS:528:DC%2BD1MXjslKqu7o%3D 10.1266/ggs.83.393 19168990