-
1
-
-
10244239321
-
Life with 6000 genes
-
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B (1996) Life with 6000 genes. Science 274: 546, 563-567.
-
(1996)
Science
, vol.274
-
-
Goffeau, A.1
Barrell, B.G.2
Bussey, H.3
Davis, R.W.4
Dujon, B.5
-
2
-
-
0033229970
-
The economics of ribosome biosynthesis in yeast
-
Warner JR (1999) The economics of ribosome biosynthesis in yeast. Trends Biochem Sci 24: 437-440.
-
(1999)
Trends Biochem Sci
, vol.24
, pp. 437-440
-
-
Warner, J.R.1
-
3
-
-
33748304113
-
Sir2 represses endogenous polymerase II transcription units in the ribosomal DNA nontranscribed spacer
-
Li C, Mueller JE, Bryk M (2006) Sir2 represses endogenous polymerase II transcription units in the ribosomal DNA nontranscribed spacer. Mol Biol Cell 17: 3848-3859.
-
(2006)
Mol Biol Cell
, vol.17
, pp. 3848-3859
-
-
Li, C.1
Mueller, J.E.2
Bryk, M.3
-
4
-
-
38949210998
-
Transcription termination and RNA degradation contribute to silencing of RNA polymerase II transcription within heterochromatin
-
Vasiljeva L, Kim M, Terzi N, Soares LM, Buratowski S (2008) Transcription termination and RNA degradation contribute to silencing of RNA polymerase II transcription within heterochromatin. Mol Cell 29: 313-323.
-
(2008)
Mol Cell
, vol.29
, pp. 313-323
-
-
Vasiljeva, L.1
Kim, M.2
Terzi, N.3
Soares, L.M.4
Buratowski, S.5
-
5
-
-
33751504083
-
Genome-wide distribution of yeast RNA polymerase II and its control by Sen1 helicase
-
Steinmetz EJ, Warren CL, Kuehner JN, Panbehi B, Ansari AZ, et al. (2006) Genome-wide distribution of yeast RNA polymerase II and its control by Sen1 helicase. Mol Cell 24: 735-746.
-
(2006)
Mol Cell
, vol.24
, pp. 735-746
-
-
Steinmetz, E.J.1
Warren, C.L.2
Kuehner, J.N.3
Panbehi, B.4
Ansari, A.Z.5
-
6
-
-
0036137613
-
An integrated approach for finding overlooked genes in yeast
-
Kumar A, Harrison PM, Cheung KH, Lan N, Echols N, et al. (2002) An integrated approach for finding overlooked genes in yeast. Nat Biotechnol 20: 58-63.
-
(2002)
Nat Biotechnol
, vol.20
, pp. 58-63
-
-
Kumar, A.1
Harrison, P.M.2
Cheung, K.H.3
Lan, N.4
Echols, N.5
-
7
-
-
0023650543
-
The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications
-
Sharp PM, Li WH (1987) The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res 15: 1281-1295.
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 1281-1295
-
-
Sharp, P.M.1
Li, W.H.2
-
8
-
-
0036828866
-
A novel mitochondrial protein, Tar1p, is encoded on the antisense strand of the nuclear 25S rDNA
-
Coehlo PS, Bryan AC, Kumar A, Shadel GS, Snyder M (2002) A novel mitochondrial protein, Tar1p, is encoded on the antisense strand of the nuclear 25S rDNA. Genes Dev 16: 2755-2760.
-
(2002)
Genes Dev
, vol.16
, pp. 2755-2760
-
-
Coehlo, P.S.1
Bryan, A.C.2
Kumar, A.3
Shadel, G.S.4
Snyder, M.5
-
9
-
-
0031761922
-
Two mutant forms of the S1/ TPR containing protein Rrp5p affect the 18S synthesis in Saccharomyces cerevisiae
-
Torchet C, Jacq C, Hermann-Le Denmat S (1998) Two mutant forms of the S1/ TPR containing protein Rrp5p affect the 18S synthesis in Saccharomyces cerevisiae. RNA 4: 1636-1652.
-
(1998)
RNA
, vol.4
, pp. 1636-1652
-
-
Torchet, C.1
Jacq, C.2
Le Hermann Denmat, S.3
-
10
-
-
48749096244
-
Expression of the rDNA-encoded mitochondrial protein Tar1p is stringently controlled and responds differentially to mitochondrial respiratory demand and dysfunction
-
Bonawitz ND, Chatenay-Lapointe M, Wearn CM, Shadel GS (2008) Expression of the rDNA-encoded mitochondrial protein Tar1p is stringently controlled and responds differentially to mitochondrial respiratory demand and dysfunction. Curr Genet 54: 83-94.
-
(2008)
Curr Genet
, vol.54
, pp. 83-94
-
-
Bonawitz, N.D.1
Chatenay-Lapointe, M.2
Wearn, C.M.3
Shadel, G.S.4
-
11
-
-
0023106633
-
The mitochondrial genotype can influence nuclear gene expression in yeast
-
Parkih VS, Morgan MM, Scott R, Clemens LS, Butow RA (1987) The mitochondrial genotype can influence nuclear gene expression in yeast. Science 235: 576-580.
-
(1987)
Science
, vol.235
, pp. 576-580
-
-
Parkih, V.S.1
Morgan, M.M.2
Scott, R.3
Clemens, L.S.4
Butow, R.A.5
-
12
-
-
0024582668
-
Interaction between yeast mitochondrial and nuclear genomes influences the abundance of novel transcripts derived from the spacer region of the nuclear ribosomal DNA repeat
-
Parikh VS, Conrab-Webb H, Docherty R, Butow RA (1989) Interaction between yeast mitochondrial and nuclear genomes influences the abundance of novel transcripts derived from the spacer region of the nuclear ribosomal DNA repeat. Mol Cell Biol 9: 1897-1907.
-
(1989)
Mol Cell Biol
, vol.9
, pp. 1897-1907
-
-
Parikh, V.S.1
Conrab-Webb, H.2
Docherty, R.3
Butow, R.A.4
-
13
-
-
0028966570
-
A polymerase switch in the synthesis of rRNA in Saccharomyces cerevisiae
-
Conrad-Webb H, Butow RA (1995) A polymerase switch in the synthesis of rRNA in Saccharomyces cerevisiae. Mol Cell Biol 15: 2420-2428.
-
(1995)
Mol Cell Biol
, vol.15
, pp. 2420-2428
-
-
Conrad-Webb, H.1
Butow, R.A.2
-
14
-
-
1642391445
-
Yeast Coq5 C-methyltransferase is required for stability of other polypeptides involved in coenzyme Q biosynthesis
-
Baba SW, Belogrudov GI, Lee JC, Lee PT, Strahan J, et al. (2004) Yeast Coq5 C-methyltransferase is required for stability of other polypeptides involved in coenzyme Q biosynthesis. J Biol Chem 279: 10052-10059.
-
(2004)
J Biol Chem
, vol.279
, pp. 10052-10059
-
-
Baba, S.W.1
Belogrudov, G.I.2
Lee, J.C.3
Lee, P.T.4
Strahan, J.5
-
15
-
-
0023489250
-
Sequence and structural features associated with translational initiator regions in yeast-a review
-
Cigan AM, Donahue TF (1987) Sequence and structural features associated with translational initiator regions in yeast-a review. Gene 59: 1-18.
-
(1987)
Gene
, vol.59
, pp. 1-18
-
-
Cigan, A.M.1
Donahue, T.F.2
-
16
-
-
0023663451
-
Compilation and comparison of the sequence context around the AUG start codons in Saccharomyces cerevisiae mRNAs
-
Hamilton R, Watanabe CK, de Boer HA (1987) Compilation and comparison of the sequence context around the AUG start codons in Saccharomyces cerevisiae mRNAs. Nucleic Acids Res 15: 3581-3593.
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 3581-3593
-
-
Hamilton, R.1
Watanabe, C.K.2
de Boer, H.A.3
-
17
-
-
0022731676
-
Mitochondrial targeting sequences may form amphiphilic helices
-
von Heijne G (1986) Mitochondrial targeting sequences may form amphiphilic helices. EMBO J 5: 1335-1342.
-
(1986)
EMBO J
, vol.5
, pp. 1335-1342
-
-
von Heijne, G.1
-
18
-
-
33646354157
-
Translocation of mitochondrial inner-membrane proteins: Conformation matters
-
de Marcos-Lousa C, Sideris DP, Tokatlidis K (2006) Translocation of mitochondrial inner-membrane proteins: conformation matters. Trends Biochem Sci 31: 259-267.
-
(2006)
Trends Biochem Sci
, vol.31
, pp. 259-267
-
-
de Marcos-Lousa, C.1
Sideris, D.P.2
Tokatlidis, K.3
-
19
-
-
68749112707
-
Importing mitochondrial proteins: Machineries and mechanisms
-
Chacinska A, Koehler CM, Milenkovic D, Lithgow T, Pfanner N (2009) Importing mitochondrial proteins: machineries and mechanisms. Cell 138: 628-644.
-
(2009)
Cell
, vol.138
, pp. 628-644
-
-
Chacinska, A.1
Koehler, C.M.2
Milenkovic, D.3
Lithgow, T.4
Pfanner, N.5
-
20
-
-
0030042248
-
Internal targeting signal of the BCS1 protein: A novel mechanism of import into mitochondria
-
Fölsch H, Guiard B, Neupert W, Stuart RA (1996) Internal targeting signal of the BCS1 protein: a novel mechanism of import into mitochondria. EMBO J 15: 479-487.
-
(1996)
EMBO J
, vol.15
, pp. 479-487
-
-
Fölsch, H.1
Guiard, B.2
Neupert, W.3
Stuart, R.A.4
-
21
-
-
2642638742
-
Two distinct and independent mitochondrial targeting signals function in the sorting of an inner membrane protein, cytochrome c1
-
Arnold I, Fölsch H, Neupert W, Stuart RA (1998) Two distinct and independent mitochondrial targeting signals function in the sorting of an inner membrane protein, cytochrome c1. J Biol Chem 273: 1469-1476.
-
(1998)
J Biol Chem
, vol.273
, pp. 1469-1476
-
-
Arnold, I.1
Fölsch, H.2
Neupert, W.3
Stuart, R.A.4
-
22
-
-
0031697580
-
Tim23p contains separate and distinct signals for targeting to mitochondria and insertion into the inner membrane
-
Davis AJ, Ryan KR, Jensen RE (1998) Tim23p contains separate and distinct signals for targeting to mitochondria and insertion into the inner membrane. Mol Biol Cell 9: 2577-2593.
-
(1998)
Mol Biol Cell
, vol.9
, pp. 2577-2593
-
-
Davis, A.J.1
Ryan, K.R.2
Jensen, R.E.3
-
23
-
-
0024095541
-
Properties of promoters cloned randomly from the Saccharomyces cerevisiae genome
-
Santangelo GM, Tornow J, McLaughlin CS, Moldave K (1988) Properties of promoters cloned randomly from the Saccharomyces cerevisiae genome. Mol Cell Biol 8: 4217-4224.
-
(1988)
Mol Cell Biol
, vol.8
, pp. 4217-4224
-
-
Santangelo, G.M.1
Tornow, J.2
McLaughlin, C.S.3
Moldave, K.4
-
24
-
-
24644499002
-
Recombination regulation by transcriptioninduced cohesin dissociation in rDNA repeats
-
Kobayashi T, Ganley AR (2005) Recombination regulation by transcriptioninduced cohesin dissociation in rDNA repeats. Science 309: 1581-1584.
-
(2005)
Science
, vol.309
, pp. 1581-1584
-
-
Kobayashi, T.1
Ganley, A.R.2
-
25
-
-
37149034478
-
Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control
-
Houseley J, Kotovic K, El Hage A, Tollervey D (2007) Trf4 targets ncRNAs from telomeric and rDNA spacer regions and functions in rDNA copy number control. EMBO J 26: 4996-5006.
-
(2007)
EMBO J
, vol.26
, pp. 4996-5006
-
-
Houseley, J.1
Kotovic, K.2
El Hage, A.3
Tollervey, D.4
-
26
-
-
0035921929
-
RNA-binding protein Nrd1 directs poly(A)-independent 39-end formation of RNA polymerase II transcripts
-
Steinmetz EJ, Conrad NK, Brow DA, Corden JL (2001) RNA-binding protein Nrd1 directs poly(A)-independent 39-end formation of RNA polymerase II transcripts. Nature 413: 327-331.
-
(2001)
Nature
, vol.413
, pp. 327-331
-
-
Steinmetz, E.J.1
Conrad, N.K.2
Brow, D.A.3
Corden, J.L.4
-
27
-
-
3042796191
-
Identification of cis elements directing termination of yeast nonpolyadenylated snoRNA transcripts
-
Carroll KL, Pradhan DA, Granek JA, Clarke ND, Corden JL (2004) Identification of cis elements directing termination of yeast nonpolyadenylated snoRNA transcripts. Mol Cell Biol 24: 6241-6252.
-
(2004)
Mol Cell Biol
, vol.24
, pp. 6241-6252
-
-
Carroll, K.L.1
Pradhan, D.A.2
Granek, J.A.3
Clarke, N.D.4
Corden, J.L.5
-
28
-
-
49449110180
-
The Nrd1-Nab3-Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain
-
Vasiljeva L, Kim M, Mutschler H, Buratowski S, Meinhart A (2008) The Nrd1-Nab3-Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain. Nat Struct Mol Biol 15: 795-804.
-
(2008)
Nat Struct Mol Biol
, vol.15
, pp. 795-804
-
-
Vasiljeva, L.1
Kim, M.2
Mutschler, H.3
Buratowski, S.4
Meinhart, A.5
-
29
-
-
33344478052
-
Regulation of yeast NRD1 expression by premature transcription termination
-
Arigo JT, Carroll KL, Ames JM, Corden JL (2006) Regulation of yeast NRD1 expression by premature transcription termination. Mol Cell 21: 641-651.
-
(2006)
Mol Cell
, vol.21
, pp. 641-651
-
-
Arigo, J.T.1
Carroll, K.L.2
Ames, J.M.3
Corden, J.L.4
-
30
-
-
30744467674
-
Nrd1 interacts with the nuclear exosome for 3′ processing of RNA polymerase II transcripts
-
Vasiljeva L, Buratowski S (2006) Nrd1 interacts with the nuclear exosome for 3′ processing of RNA polymerase II transcripts. Mol Cell 21: 239-248.
-
(2006)
Mol Cell
, vol.21
, pp. 239-248
-
-
Vasiljeva, L.1
Buratowski, S.2
-
31
-
-
34248195476
-
Endogenous synthesis of coenzyme Q in eukaryotes
-
Tran UC, Clarke CF (2007) Endogenous synthesis of coenzyme Q in eukaryotes. Mitochondrion 7: S62-71.
-
(2007)
Mitochondrion
, vol.7
-
-
Tran, U.C.1
Clarke, C.F.2
-
32
-
-
77951181044
-
Regulation of pre-mRNA splicing in Xenopus oocytes by targeted 29-O-methylation
-
Ge J, Liu H, Yu YT (2010) Regulation of pre-mRNA splicing in Xenopus oocytes by targeted 29-O-methylation. RNA 16: 1078-1085.
-
(2010)
RNA
, vol.16
, pp. 1078-1085
-
-
Ge, J.1
Liu, H.2
Yu, Y.T.3
-
33
-
-
37749034810
-
Targeted pre-mRNA modification for gene silencing and regulation
-
Zhao X, Yu YT (2008) Targeted pre-mRNA modification for gene silencing and regulation. Nat Methods 5: 95-100.
-
(2008)
Nat Methods
, vol.5
, pp. 95-100
-
-
Zhao, X.1
Yu, Y.T.2
-
34
-
-
0025785410
-
A family of low and high copy replicative, integrative and single-stranded S. cerevisiae/E. coli shuttle vectors
-
Bonneaud N, Ozier-Kalogeropoulos O, Li G, Labouesse M, Minvielle- Sebastia L, et al. (1991) A family of low and high copy replicative, integrative and single-stranded S. cerevisiae/E. coli shuttle vectors. Yeast 7: 609-615.
-
(1991)
Yeast
, vol.7
, pp. 609-615
-
-
Bonneaud, N.1
Ozier-Kalogeropoulos, O.2
Li, G.3
Labouesse, M.4
Minvielle-Sebastia, L.5
-
35
-
-
0021874034
-
Plasmids pEMBLY: New single-stranded shuttle vectors for the recovery and analysis of yeast DNA sequences
-
Baldari C, Cesareni G (1985) Plasmids pEMBLY: new single-stranded shuttle vectors for the recovery and analysis of yeast DNA sequences. Gene 35: 27-32.
-
(1985)
Gene
, vol.35
, pp. 27-32
-
-
Baldari, C.1
Cesareni, G.2
-
36
-
-
0031922812
-
A dualluciferase reporter system for studying recoding signals
-
Grentzmann G, Ingram JA, Kelly PJ, Gesteland RF, Atkins JF (1998) A dualluciferase reporter system for studying recoding signals. RNA 4: 479-486.
-
(1998)
RNA
, vol.4
, pp. 479-486
-
-
Grentzmann, G.1
Ingram, J.A.2
Kelly, P.J.3
Gesteland, R.F.4
Atkins, J.F.5
-
37
-
-
0029070954
-
Versatile vectors to study recoding: Conservation of rules between yeast and mammalian cells
-
Stahl G, Bidou L, Rousset JP, Cassan M (1995) Versatile vectors to study recoding: conservation of rules between yeast and mammalian cells. Nucleic Acids Res 23: 1557-1560.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 1557-1560
-
-
Stahl, G.1
Bidou, L.2
Rousset, J.P.3
Cassan, M.4
-
38
-
-
0028334071
-
The NAM1 protein (NAM1p), which is selectively required for cox1, cytb and atp6 transcript processing/stabilisation, is located in the yeast mitochondrial matrix
-
Wallis MG, Groudinsky O, Slonimski PP, Dujardin G (1994) The NAM1 protein (NAM1p), which is selectively required for cox1, cytb and atp6 transcript processing/stabilisation, is located in the yeast mitochondrial matrix. Eur J Biochem 222: 27-32.
-
(1994)
Eur J Biochem
, vol.222
, pp. 27-32
-
-
Wallis, M.G.1
Groudinsky, O.2
Slonimski, P.P.3
Dujardin, G.4
-
39
-
-
0000593120
-
Preparation of yeast RNA
-
In: Ausubel FM, Brent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K, eds, New York, N.Y: John Wiley & Sons
-
Collart MA, Oliviero S (1997) Preparation of yeast RNA. In: Ausubel FM, Brent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K, eds. Current protocols in molecular biology. New York, N.Y: John Wiley & Sons. pp 13.12.1-13.12.5.
-
(1997)
Current protocols in molecular biology
-
-
Collart, M.A.1
Oliviero, S.2
-
40
-
-
0023829903
-
'DNA Strider': A 'C' program for the fast analysis of DNA and protein sequences on the Apple Macintosh family of computers
-
Marck C (1988) 'DNA Strider': a 'C' program for the fast analysis of DNA and protein sequences on the Apple Macintosh family of computers. Nucleic Acids Res 16: 1829-1836.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 1829-1836
-
-
Marck, C.1
|