메뉴 건너뛰기




Volumn 84, Issue 6, 2004, Pages 913-921

Construction of representative transcript and protein sets of human, mouse, and rat as a platform for their transcriptome and proteome analysis

Author keywords

Clustering; Mammal; Splicing variant; Transcript; Transcriptome

Indexed keywords

PROTEIN; PROTEOME;

EID: 7944237950     PISSN: 08887543     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ygeno.2004.08.011     Document Type: Article
Times cited : (18)

References (22)
  • 1
    • 2042437650 scopus 로고    scopus 로고
    • Initial sequencing and analysis of the human genome
    • International Human Genome Sequencing Consortium Initial sequencing and analysis of the human genome Nature 409 2001 860 921
    • (2001) Nature , vol.409 , pp. 860-921
  • 2
    • 1542563409 scopus 로고    scopus 로고
    • Initial sequencing and comparative analysis of the mouse genome
    • Mouse Genome Sequencing Consortium Initial sequencing and comparative analysis of the mouse genome Nature 420 2002 520 562
    • (2002) Nature , vol.420 , pp. 520-562
    • Genome Sequencing Consortium, M.1
  • 3
    • 0142104045 scopus 로고    scopus 로고
    • Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs
    • The RIKEN Genome Exploration Research Group Phase I, II Team
    • The FANTOM Consortium The RIKEN Genome Exploration Research Group Phase I, II Team Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs Nature 420 2002 563 573
    • (2002) Nature , vol.420 , pp. 563-573
    • Fantom Consortium, T.1
  • 4
    • 0037168586 scopus 로고    scopus 로고
    • Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
    • R.L. Strausberg Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences Proc. Natl. Acad. Sci. USA 99 2002 16899 16903
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 16899-16903
    • Strausberg, R.L.1
  • 5
    • 9144252038 scopus 로고    scopus 로고
    • Complete sequencing and characterization of 21,243 full-length human cDNAs
    • T. Ota Complete sequencing and characterization of 21,243 full-length human cDNAs Nat. Genet. 36 2004 40 45
    • (2004) Nat. Genet. , vol.36 , pp. 40-45
    • Ota, T.1
  • 6
    • 0035162594 scopus 로고    scopus 로고
    • RefSeq and LocusLink: NCBI gene-centered resources
    • K.D. Pruitt, and D.R. Maglott RefSeq and LocusLink: NCBI gene-centered resources Nucleic Acids Res. 29 2001 137 140
    • (2001) Nucleic Acids Res. , vol.29 , pp. 137-140
    • Pruitt, K.D.1    Maglott, D.R.2
  • 8
    • 0037174671 scopus 로고    scopus 로고
    • Transcriptional regulatory networks in Saccharomyces cerevisiae
    • T.I. Lee Transcriptional regulatory networks in Saccharomyces cerevisiae Science 298 2002 799 804
    • (2002) Science , vol.298 , pp. 799-804
    • Lee, T.I.1
  • 9
    • 0038349624 scopus 로고    scopus 로고
    • Impact of alternative initiation, splicing, and termination on the diversity of the mRNA transcripts encoded by the mouse transcriptome
    • M. Zavolan Impact of alternative initiation, splicing, and termination on the diversity of the mRNA transcripts encoded by the mouse transcriptome Genome Res. 13 2003 1290 1300
    • (2003) Genome Res. , vol.13 , pp. 1290-1300
    • Zavolan, M.1
  • 10
    • 0038688090 scopus 로고    scopus 로고
    • A guide to the mammalian genome
    • Y. Okazaki, and D.A. Hume A guide to the mammalian genome Genome Res. 13 2003 1267 1272
    • (2003) Genome Res. , vol.13 , pp. 1267-1272
    • Okazaki, Y.1    Hume, D.A.2
  • 11
    • 0037673675 scopus 로고    scopus 로고
    • Targeting a complex transcriptome: The construction of the mouse full-length cDNA encyclopedia
    • P. Carninci Targeting a complex transcriptome: the construction of the mouse full-length cDNA encyclopedia Genome Res. 13 2003 1273 1289
    • (2003) Genome Res. , vol.13 , pp. 1273-1289
    • Carninci, P.1
  • 12
    • 0035165581 scopus 로고    scopus 로고
    • The TIGR gene indices: Analysis of gene transcript sequences in highly sampled eukaryotic species
    • J. Quackenbush The TIGR gene indices: analysis of gene transcript sequences in highly sampled eukaryotic species Nucleic Acids Res. 29 2001 159 164
    • (2001) Nucleic Acids Res. , vol.29 , pp. 159-164
    • Quackenbush, J.1
  • 13
    • 9144234728 scopus 로고    scopus 로고
    • The Mouse Genome Database (MGD): Integrating biology with the genome
    • C.J. Bult The Mouse Genome Database (MGD): integrating biology with the genome Nucleic Acids Res. 32 2004 D476 D481 (Database issue)
    • (2004) Nucleic Acids Res. , vol.32
    • Bult, C.J.1
  • 14
    • 0029355897 scopus 로고
    • ESTablishing a human transcript map
    • M.S. Boguski, and G.D. Schuler ESTablishing a human transcript map Nat. Genet. 10 1995 369 371
    • (1995) Nat. Genet. , vol.10 , pp. 369-371
    • Boguski, M.S.1    Schuler, G.D.2
  • 15
    • 0037252714 scopus 로고    scopus 로고
    • IMGT, the international ImMunoGeneTics database
    • M.P. Lefranc IMGT, the international ImMunoGeneTics database Nucleic Acids Res. 31 2003 307 310
    • (2003) Nucleic Acids Res. , vol.31 , pp. 307-310
    • Lefranc, M.P.1
  • 16
    • 10744226888 scopus 로고    scopus 로고
    • Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs
    • S. Cawley Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs Cell 116 2004 499 509
    • (2004) Cell , vol.116 , pp. 499-509
    • Cawley, S.1
  • 17
    • 2442707676 scopus 로고    scopus 로고
    • The Ensembl automatic gene annotation system
    • V. Curwen The Ensembl automatic gene annotation system Genome Res. 14 2004 942 950
    • (2004) Genome Res. , vol.14 , pp. 942-950
    • Curwen, V.1
  • 18
    • 0038688072 scopus 로고    scopus 로고
    • Identification of putative noncoding RNAs among the RIKEN mouse full-length cDNA collection
    • K. Numata Identification of putative noncoding RNAs among the RIKEN mouse full-length cDNA collection Genome Res. 13 2003 1301 1306
    • (2003) Genome Res. , vol.13 , pp. 1301-1306
    • Numata, K.1
  • 20
    • 9144233601 scopus 로고    scopus 로고
    • Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage
    • T. Shiraki Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage Proc. Natl. Acad. Sci. USA 100 2003 15776 15781
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 15776-15781
    • Shiraki, T.1
  • 21
    • 0036226603 scopus 로고    scopus 로고
    • BLAT-the BLAST-like alignment tool
    • W.J. Kent BLAT-the BLAST-like alignment tool Genome Res. 12 2002 656 664
    • (2002) Genome Res. , vol.12 , pp. 656-664
    • Kent, W.J.1
  • 22
    • 0031732094 scopus 로고    scopus 로고
    • A computer program for aligning a cDNA sequence with a genomic DNA sequence
    • L. Florea, G. Hartzell, Z. Zhang, G.M. Rubin, and W. Miller A computer program for aligning a cDNA sequence with a genomic DNA sequence Genome Res. 8 1998 967 974
    • (1998) Genome Res. , vol.8 , pp. 967-974
    • Florea, L.1    Hartzell, G.2    Zhang, Z.3    Rubin, G.M.4    Miller, W.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.