-
1
-
-
0028932883
-
Structures of DNA and RNA polymerases and their interactions with nucleic acid substrates
-
Arnold E., Ding J., Hughes S.H., Hostomsky Z. Structures of DNA and RNA polymerases and their interactions with nucleic acid substrates. Curr. Opin. Struct. Biol. 5:1995;27-38
-
(1995)
Curr. Opin. Struct. Biol.
, vol.5
, pp. 27-38
-
-
Arnold, E.1
Ding, J.2
Hughes, S.H.3
Hostomsky, Z.4
-
3
-
-
0027217643
-
Compilation, alignment, and phylogenetic relationships of DNA polymerases
-
Braithwaite D.K., Ito J. Compilation, alignment, and phylogenetic relationships of DNA polymerases. Nucleic Acids Res. 21:1993;787-802
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 787-802
-
-
Braithwaite, D.K.1
Ito, J.2
-
4
-
-
3543012707
-
Crystallography & NMR system: A new software suite for macromolecular structure determination
-
Brünger A.T., Adams P.D., Clore G.M., DeLano W.L., Gros P., Grosse-Kunstleve R.W., Jiang J.S., Kuszewski J., Nilges M., Pannu N.S., et al. Crystallography & NMR system. a new software suite for macromolecular structure determination Acta Crystallogr. D Biol. Crystallogr. 54:1998;905-921
-
(1998)
Acta Crystallogr. D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
Delano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
-
5
-
-
0028129989
-
Conserved structures and diversity of functions of RNA-binding proteins
-
Burd C.G., Dreyfuss G. Conserved structures and diversity of functions of RNA-binding proteins. Science. 265:1994;615-621
-
(1994)
Science
, vol.265
, pp. 615-621
-
-
Burd, C.G.1
Dreyfuss, G.2
-
6
-
-
0032814005
-
Archaeal DNA replication: Identifying the pieces to solve a puzzle
-
Cann I.K., Ishino Y. Archaeal DNA replication. identifying the pieces to solve a puzzle Genetics. 152:1999;1249-1267
-
(1999)
Genetics
, vol.152
, pp. 1249-1267
-
-
Cann, I.K.1
Ishino, Y.2
-
7
-
-
0028103275
-
The (Collaborative Computational Project 4, Number 4) CCP4 suite: Programs for protein crystallography
-
CCP4 The (Collaborative Computational Project 4, Number 4) CCP4 suite. programs for protein crystallography Acta Crystallogr. D Biol. Crystallogr. 50:1994;760-763
-
(1994)
Acta Crystallogr. D Biol. Crystallogr.
, vol.50
, pp. 760-763
-
-
-
8
-
-
0024297354
-
Multiple sequence alignment with hierarchical clustering
-
Corpet F. Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res. 16:1988;10881-10890
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 10881-10890
-
-
Corpet, F.1
-
9
-
-
0032872798
-
Density modification for macromolecular phase improvement
-
Cowtan K.D., Zhang K.Y. Density modification for macromolecular phase improvement. Prog. Biophys. Mol. Biol. 72:1999;245-270
-
(1999)
Prog. Biophys. Mol. Biol.
, vol.72
, pp. 245-270
-
-
Cowtan, K.D.1
Zhang, K.Y.2
-
10
-
-
0025040632
-
An attempt to unify the structure of polymerases
-
Delarue M., Poch O., Tordo N., Moras D., Argos P. An attempt to unify the structure of polymerases. Protein Eng. 3:1990;461-467
-
(1990)
Protein Eng.
, vol.3
, pp. 461-467
-
-
Delarue, M.1
Poch, O.2
Tordo, N.3
Moras, D.4
Argos, P.5
-
12
-
-
0036894880
-
Structural basis for uracil recognition by archaeal family B DNA polymerases
-
Fogg M.J., Pearl L.H., Connolly B.A. Structural basis for uracil recognition by archaeal family B DNA polymerases. Nat. Struct. Biol. 9:2002;922-927
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 922-927
-
-
Fogg, M.J.1
Pearl, L.H.2
Connolly, B.A.3
-
13
-
-
0035369086
-
Structure of the replicating complex of a pol alpha family DNA polymerase
-
Franklin M.C., Wang J., Steitz T.A. Structure of the replicating complex of a pol alpha family DNA polymerase. Cell. 105:2001;657-667
-
(2001)
Cell
, vol.105
, pp. 657-667
-
-
Franklin, M.C.1
Wang, J.2
Steitz, T.A.3
-
14
-
-
0033529945
-
A read-ahead function in archaeal DNA polymerases detects promutagenic template-strand uracil
-
Greagg M.A., Fogg M.J., Panayotou G., Evans S.J., Connolly B.A., Pearl L.H. A read-ahead function in archaeal DNA polymerases detects promutagenic template-strand uracil. Proc. Natl. Acad. Sci. USA. 96:1999;9045-9050
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 9045-9050
-
-
Greagg, M.A.1
Fogg, M.J.2
Panayotou, G.3
Evans, S.J.4
Connolly, B.A.5
Pearl, L.H.6
-
15
-
-
0242317687
-
Processing of DNA lesions by archaeal DNA polymerases from Sulfolobus solfataricus
-
Gruz P., Shimizu M., Pisani F.M., De Felice M., Kanke Y., Nohmi T. Processing of DNA lesions by archaeal DNA polymerases from Sulfolobus solfataricus. Nucleic Acids Res. 31:2003;4024-4030
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 4024-4030
-
-
Gruz, P.1
Shimizu, M.2
Pisani, F.M.3
De Felice, M.4
Kanke, Y.5
Nohmi, T.6
-
16
-
-
0035936690
-
Crystal structure of DNA polymerase from hyperthermophilic archaeon Pyrococcus kodakaraensis KOD1
-
Hashimoto H., Nishioka M., Fujiwara S., Takagi M., Imanaka T., Inoue T., Kai Y. Crystal structure of DNA polymerase from hyperthermophilic archaeon Pyrococcus kodakaraensis KOD1. J. Mol. Biol. 306:2001;469-477
-
(2001)
J. Mol. Biol.
, vol.306
, pp. 469-477
-
-
Hashimoto, H.1
Nishioka, M.2
Fujiwara, S.3
Takagi, M.4
Imanaka, T.5
Inoue, T.6
Kai, Y.7
-
17
-
-
0033616725
-
Crystal structure of a thermostable type B DNA polymerase from Thermococcus gorgonarius
-
Hopfner K.-P., Eichinger A., Engh R.A., Laue F., Ankenbauer W., Huber R., Angerer B. Crystal structure of a thermostable type B DNA polymerase from Thermococcus gorgonarius. Proc. Natl. Acad. Sci. USA. 96:1999;3600-3605
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 3600-3605
-
-
Hopfner, K.-P.1
Eichinger, A.2
Engh, R.A.3
Laue, F.4
Ankenbauer, W.5
Huber, R.6
Angerer, B.7
-
18
-
-
0028206048
-
Function and structure relationships in DNA polymerases
-
Joyce C.M., Steitz T.A. Function and structure relationships in DNA polymerases. Annu. Rev. Biochem. 63:1994;777-822
-
(1994)
Annu. Rev. Biochem.
, vol.63
, pp. 777-822
-
-
Joyce, C.M.1
Steitz, T.A.2
-
19
-
-
2342419732
-
DNA replication fidelity
-
Kunkel T.A. DNA replication fidelity. J. Biol. Chem. 279:2004;16895-16898
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 16895-16898
-
-
Kunkel, T.A.1
-
20
-
-
0027169515
-
Main-chain bond lengths and bond angles in protein structures
-
Laskowski R.A., Moss D.S., Thornton J.M. Main-chain bond lengths and bond angles in protein structures. J. Mol. Biol. 231:1993;1049-1067
-
(1993)
J. Mol. Biol.
, vol.231
, pp. 1049-1067
-
-
Laskowski, R.A.1
Moss, D.S.2
Thornton, J.M.3
-
21
-
-
0032169417
-
Crystallization and preliminary X-ray diffraction studies of DNA polymerase from the thermophilic archaeon Sulfolobus solfataricus
-
Nastopoulos V., Pisani F.M., Savino C., Federici L., Rossi M., Tsernoglou D. Crystallization and preliminary X-ray diffraction studies of DNA polymerase from the thermophilic archaeon Sulfolobus solfataricus. Acta Crystallogr. D. 54:1998;1002-1004
-
(1998)
Acta Crystallogr. D
, vol.54
, pp. 1002-1004
-
-
Nastopoulos, V.1
Pisani, F.M.2
Savino, C.3
Federici, L.4
Rossi, M.5
Tsernoglou, D.6
-
22
-
-
17944380943
-
The Y-family of DNA polymerases
-
Ohmori H., Friedberg E.C., Fuchs R.P., Goodman M.F., Hanaoka F., Hinkle D., Kunkel T.A., Lawrence C.W., Livneh Z., Nohmi T., et al. The Y-family of DNA polymerases. Mol. Cell. 8:2001;7-8
-
(2001)
Mol. Cell
, vol.8
, pp. 7-8
-
-
Ohmori, H.1
Friedberg, E.C.2
Fuchs, R.P.3
Goodman, M.F.4
Hanaoka, F.5
Hinkle, D.6
Kunkel, T.A.7
Lawrence, C.W.8
Livneh, Z.9
Nohmi, T.10
-
23
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinoski Z., Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276:1997;307-326
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinoski, Z.1
Minor, W.2
-
24
-
-
0034548918
-
Nucleotide-sequence-specific and non-specific interaction of T4 polymerases with its own mRNA
-
Pavlov A.R., Karam J.D. Nucleotide-sequence-specific and non-specific interaction of T4 polymerases with its own mRNA. Nucleic Acids Res. 28:2000;4657-4664
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 4657-4664
-
-
Pavlov, A.R.1
Karam, J.D.2
-
25
-
-
0028176299
-
Evidence that an archaeal alpha-like DNA polymerase has a modular organization of its associated catalytic activities
-
Pisani F.M., Rossi M. Evidence that an archaeal alpha-like DNA polymerase has a modular organization of its associated catalytic activities. J. Biol. Chem. 269:1994;7887-7892
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 7887-7892
-
-
Pisani, F.M.1
Rossi, M.2
-
26
-
-
0026720484
-
A DNA polymerase from the archaeon Sulfolobus solfataricus shows sequence similarity to family B DNA polymerases
-
Pisani F.M., De Martino C., Rossi M. A DNA polymerase from the archaeon Sulfolobus solfataricus shows sequence similarity to family B DNA polymerases. Nucleic Acids Res. 20:1992;2711-2716
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 2711-2716
-
-
Pisani, F.M.1
De Martino, C.2
Rossi, M.3
-
27
-
-
0029951380
-
Domain organization and DNA-induced conformational changes of an archaeal family B DNA polymerase
-
Pisani F.M., Manco G., Carratore V., Rossi M. Domain organization and DNA-induced conformational changes of an archaeal family B DNA polymerase. Biochemistry. 35:1996;9158-9166
-
(1996)
Biochemistry
, vol.35
, pp. 9158-9166
-
-
Pisani, F.M.1
Manco, G.2
Carratore, V.3
Rossi, M.4
-
28
-
-
0034595517
-
Crystal structure of a pol alpha family DNA polymerase from the hyperthermophilic archaeon Thermococcus sp. 9 degrees N-7
-
Rodriguez A.C., Park H.-W., Mao C., Beese L.S. Crystal structure of a pol alpha family DNA polymerase from the hyperthermophilic archaeon Thermococcus sp. 9 degrees N-7. J. Mol. Biol. 299:2000;447-462
-
(2000)
J. Mol. Biol.
, vol.299
, pp. 447-462
-
-
Rodriguez, A.C.1
Park, H.-W.2
Mao, C.3
Beese, L.S.4
-
29
-
-
0032692565
-
Building a replisome from interacting pieces: Sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex
-
Shamoo Y., Steitz T.A. Building a replisome from interacting pieces. sliding clamp complexed to a peptide from DNA polymerase and a polymerase editing complex Cell. 99:1999;155-166
-
(1999)
Cell
, vol.99
, pp. 155-166
-
-
Shamoo, Y.1
Steitz, T.A.2
-
30
-
-
0033570179
-
Crystal structure of an archaebacterial DNA polymerase
-
Zhao Y., Jeruzalmi D., Moarefi I., Leighton L., Lasken R., Kuriyan J. Crystal structure of an archaebacterial DNA polymerase. Structure. 7:1999;1189-1199
-
(1999)
Structure
, vol.7
, pp. 1189-1199
-
-
Zhao, Y.1
Jeruzalmi, D.2
Moarefi, I.3
Leighton, L.4
Lasken, R.5
Kuriyan, J.6
|