Multiplex polymerase chain reaction method discriminating Escherichia coli and Shigella sp.

Archives of Microbiology

Volumn 193, Issue 2, 2011, Pages 83-87

  Yamazaki, Y ^a   Fukasawa, A ^a  

^a Ibaraki Prefectural Institute of Public Health   (Japan)

Author keywords

Escherichia coli; Polymerase chain reaction; Shigella

Indexed keywords

BACTERIAL DNA; BACTERIAL PROTEIN; BETA GALACTOSIDASE; PROTEIN CYDA; PROTEIN LACA; UNCLASSIFIED DRUG;

ACCURACY; ARTICLE; BACTERIAL GENE; BACTERIUM CULTURE; BASE PAIRING; CONTROLLED STUDY; DNA TEMPLATE; ESCHERICHIA COLI; INTERMETHOD COMPARISON; MULTIPLEX POLYMERASE CHAIN REACTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SENSITIVITY AND SPECIFICITY; SHIGELLA; SHIGELLA FLEXNERI; SHIGELLA SONNEI; SPECIES DIFFERENCE;

DNA PRIMERS; ESCHERICHIA COLI; POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; SHIGELLA;

ESCHERICHIA COLI; SHIGELLA; SHIGELLA FLEXNERI; SHIGELLA SONNEI; SHIGELLA SP.;

EID: 79251622968     PISSN: 03028933     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00203-010-0647-8     Document Type: Article

References (20)

1. Ausubel FM et al (1987) Current protocols in molecular biology. John Wiley and Sons, New York
2. C Baker-Austin J Morris JA Lowther R Rangdale DN Lees 2009 Rapid identification and differentiation of agricultural faecal contamination sources using multiplex PCR Lett Appl Microbiol 49 529 532 1:STN:280: DC%2BD1MnisFShuw%3D%3D 10.1111/j.1472-765X.2009.02679.x 19708886
3. AK Bej RJ Steffan J DiCesare L Haff RM Atlas 1990 Detection of coliform bacteria in water by polymerase chain reaction and gene probes Appl Environ Microbiol 56 307 314 1:STN:280:DyaK3c7msFerug%3D%3D 2306085
4. AK Bej JL DiCesare L Haff RM Atlas 1991 Detection of Escherichia coli and Shigella spp. in water by using the polymerase chain reaction and gene probes for uid Appl Environ Microbiol 57 1013 1017 1:CAS:528:DyaK3MXitFCjsLg%3D 2059028
5. AK Bej SC McCarty RM Atlas 1991 Detection of coliform bacteria and Escherichia coli by multiplex polymerase chain reaction: comparison with defined substrate and plating methods for water quality monitoring Appl Environ Microbiol 57 2429 2432 1:STN:280:DyaK387hslGkuw%3D%3D 1768116
6. GW Chang J Brill R Lum 1989 Proportion of beta-D-glucuronidase-negative Escherichia coli in human fecal samples Appl Environ Microbiol 55 335 339 1:STN:280:DyaL1M3ksFyntg%3D%3D 2655534
7. SC Edberg CM Kontnick 1986 Comparison of beta-glucuronidase-based substrate systems for identification of Escherichia coli J Clin Microbiol 24 368 371 1:CAS:528:DyaL28XltlSnt74%3D 3531228
8. SC Edberg MJ Allen DB Smith 1989 National field evaluation of a defined substrate method for the simultaneous detection of total coliforms and Escherichia coli from drinking water: comparison with presence-absence techniques Appl Environ Microbiol 55 1003 1008 1:STN:280:DyaL1M3ntFyksg%3D%3D 2658802
9. SC Edberg MJ Allen DB Smith NJ Kriz 1990 Enumeration of total coliforms and Escherichia coli from source water by the defined substrate technology Appl Environ Microbiol 56 366 369 1:STN:280:DyaK3c7msFeqtw%3D%3D 2407184
10. VP Gannon RK King JY Kim EJ Thomas 1992 Rapid and sensitive method for detection of Shiga-like toxin-producing Escherichia coli in ground beef using the polymerase chain reaction Appl Environ Microbiol 58 3809 3815 1:CAS:528:DyaK3sXit1KltLc%3D 1476425
11. MA Hediger DF Johnson DP Nierlich I Zabin 1985 DNA sequence of the lactose operon: the lacA gene and the transcriptional termination region Proc Natl Acad Sci U S A 82 6414 6418 1:CAS:528:DyaL2MXmtVOktro%3D 10.1073/pnas.82.19.6414 3901000
12. K Horakova H Mlejnkova P Mlejnek 2006 Direct detection of bacterial faecal indicators in water samples using PCR Water Sci Technol 54 135 140 1:STN:280:DC%2BD28ngsVOktQ%3D%3D 17037144
13. K Horakova H Mlejnkova P Mlejnek 2008 Specific detection of Escherichia coli isolated from water samples using polymerase chain reaction targeting four genes: cytochrome bd complex, lactose permease, beta-D-glucuronidase, and beta-D-galactosidase J Appl Microbiol 105 970 976 1:CAS:528:DC%2BD1cXht12lurjO 10.1111/j.1365-2672.2008.03838.x 18489560
14. BM Hsu 2010 Differentiation and identification of Shigella spp. and enteroinvasive Escherichia coli in environmental waters by a molecular method and biochemical test Water Res 44 949 955 1:CAS:528:DC%2BC3cXhvFarsLs%3D 10.1016/j.watres.2009.10.004 19917511
15. WB Hsu JH Wang PC Chen YS Lu JH Chen 2007 Detecting low concentrations of Shigella sonnei in environmental water samples by PCR FEMS Microbiol Lett 270 291 298 1:CAS:528:DC%2BD2sXkvFSrs78%3D 10.1111/j.1574-6968.2007.00686.x 17391373
16. RY Kong SK Lee TW Law SH Law RS Wu 2002 Rapid detection of six types of bacterial pathogens in marine waters by multiplex PCR Water Res 36 2802 2812 1:CAS:528:DC%2BD38Xktlaktbs%3D 10.1016/S0043-1354(01)00503-6 12146868
17. AF Maheux FJ Picard M Boissinot L Bissonnette S Paradis MG Bergeron 2009 Analytical comparison of nine PCR primer sets designed to detect the presence of Escherichia coli/Shigella in water samples Water Res 43 3019 3028 1:CAS:528:DC%2BD1MXntF2gtb4%3D 10.1016/j.watres.2009.04.017 19482328
18. A Rompre P Servais J Baudart MR de-Roubin P Laurent 2002 Detection and enumeration of coliforms in drinking water: current methods and emerging approaches J Microbiol Methods 49 31 54 10.1016/S0167-7012(01)00351-7 11777581
19. KE Rudd 2000 EcoGene: a genome sequence database for Escherichia coli K-12 Nucleic Acids Res 28 60 64 1:CAS:528:DC%2BD3cXhvVGqu7Y%3D 10.1093/nar/28.1.60 10592181
20. HY Tsen CK Lin WR Chi 1998 Development and use of 16S rRNA gene targeted PCR primers for the identification of Escherichia coli cells in water J Appl Microbiol 85 554 560 1:CAS:528:DyaK1cXmtlOqs7Y%3D 10.1046/j.1365-2672.1998. 853535.x 9750286