-
1
-
-
0344721480
-
Complete sequence and gene map of a human major histocompatibility complex. The MHC sequencing consortium
-
10.1038/44853, 10553908, Consortium
-
Consortium Complete sequence and gene map of a human major histocompatibility complex. The MHC sequencing consortium. Nature 1999, 401:921-923. 10.1038/44853, 10553908, Consortium.
-
(1999)
Nature
, vol.401
, pp. 921-923
-
-
-
2
-
-
33749137515
-
A high-resolution HLA and SNP haplotype map for disease association studies in the extended human MHC
-
10.1038/ng1885, 2670196, 16998491
-
de Bakker PI, McVean G, Sabeti PC, Miretti MM, Green T, Marchini J, Ke X, Monsuur AJ, Whittaker P, Delgado M, et al. A high-resolution HLA and SNP haplotype map for disease association studies in the extended human MHC. Nature genetics 2006, 38:1166-1172. 10.1038/ng1885, 2670196, 16998491.
-
(2006)
Nature genetics
, vol.38
, pp. 1166-1172
-
-
de Bakker, P.I.1
McVean, G.2
Sabeti, P.C.3
Miretti, M.M.4
Green, T.5
Marchini, J.6
Ke, X.7
Monsuur, A.J.8
Whittaker, P.9
Delgado, M.10
-
3
-
-
38349100266
-
Variation analysis and gene annotation of eight MHC haplotypes: the MHC Haplotype Project
-
10.1007/s00251-007-0262-2, 2206249, 18193213
-
Horton R, Gibson R, Coggill P, Miretti M, Allcock RJ, Almeida J, Forbes S, Gilbert JG, Halls K, Harrow JL, et al. Variation analysis and gene annotation of eight MHC haplotypes: the MHC Haplotype Project. Immunogenetics 2008, 60:1-18. 10.1007/s00251-007-0262-2, 2206249, 18193213.
-
(2008)
Immunogenetics
, vol.60
, pp. 1-18
-
-
Horton, R.1
Gibson, R.2
Coggill, P.3
Miretti, M.4
Allcock, R.J.5
Almeida, J.6
Forbes, S.7
Gilbert, J.G.8
Halls, K.9
Harrow, J.L.10
-
4
-
-
9444295337
-
Gene map of the extended human MHC
-
10.1038/nrg1489, 15573121
-
Horton R, Wilming L, Rand V, Lovering RC, Bruford EA, Khodiyar VK, Lush MJ, Povey S, Talbot CC, Wright MW, et al. Gene map of the extended human MHC. Nat Rev Genet 2004, 5:889-899. 10.1038/nrg1489, 15573121.
-
(2004)
Nat Rev Genet
, vol.5
, pp. 889-899
-
-
Horton, R.1
Wilming, L.2
Rand, V.3
Lovering, R.C.4
Bruford, E.A.5
Khodiyar, V.K.6
Lush, M.J.7
Povey, S.8
Talbot, C.C.9
Wright, M.W.10
-
5
-
-
0038581912
-
The influence of HLA genotype on AIDS
-
10.1146/annurev.med.54.101601.152346, 12525683
-
Carrington M, O'Brien SJ. The influence of HLA genotype on AIDS. Annu Rev Med 2003, 54:535-551. 10.1146/annurev.med.54.101601.152346, 12525683.
-
(2003)
Annu Rev Med
, vol.54
, pp. 535-551
-
-
Carrington, M.1
O'Brien, S.J.2
-
6
-
-
43249119095
-
Defining the role of the MHC in autoimmunity: a review and pooled analysis
-
10.1371/journal.pgen.1000024, 2291482, 18437207
-
Fernando MM, Stevens CR, Walsh EC, De Jager PL, Goyette P, Plenge RM, Vyse TJ, Rioux JD. Defining the role of the MHC in autoimmunity: a review and pooled analysis. PLoS Genet 2008, 4:e1000024. 10.1371/journal.pgen.1000024, 2291482, 18437207.
-
(2008)
PLoS Genet
, vol.4
-
-
Fernando, M.M.1
Stevens, C.R.2
Walsh, E.C.3
De Jager, P.L.4
Goyette, P.5
Plenge, R.M.6
Vyse, T.J.7
Rioux, J.D.8
-
7
-
-
73249122274
-
Mapping of multiple susceptibility variants within the MHC region for 7 immune-mediated diseases
-
10.1073/pnas.0909307106, 2773992, 19846760
-
Rioux JD, Goyette P, Vyse TJ, Hammarstrom L, Fernando MM, Green T, De Jager PL, Foisy S, Wang J, de Bakker PI, et al. Mapping of multiple susceptibility variants within the MHC region for 7 immune-mediated diseases. Proc Natl Acad Sci USA 2009, 106:18680-18685. 10.1073/pnas.0909307106, 2773992, 19846760.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 18680-18685
-
-
Rioux, J.D.1
Goyette, P.2
Vyse, T.J.3
Hammarstrom, L.4
Fernando, M.M.5
Green, T.6
De Jager, P.L.7
Foisy, S.8
Wang, J.9
de Bakker, P.I.10
-
8
-
-
0019762844
-
Genetics of HLA disease association
-
10.1146/annurev.ge.15.120181.001125, 7039493
-
Ryder LP, Svejgaard A, Dausset J. Genetics of HLA disease association. Annu Rev Genet 1981, 15:169-187. 10.1146/annurev.ge.15.120181.001125, 7039493.
-
(1981)
Annu Rev Genet
, vol.15
, pp. 169-187
-
-
Ryder, L.P.1
Svejgaard, A.2
Dausset, J.3
-
9
-
-
0036625047
-
The clinical significance of human leukocyte antigen (HLA) allele compatibility in patients receiving a marrow transplant from serologically HLA-A, HLA-B, and HLA-DR matched unrelated donors
-
10.1182/blood.V99.11.4200, 12010826
-
Morishima Y, Sasazuki T, Inoko H, Juji T, Akaza T, Yamamoto K, Ishikawa Y, Kato S, Sao H, Sakamaki H, et al. The clinical significance of human leukocyte antigen (HLA) allele compatibility in patients receiving a marrow transplant from serologically HLA-A, HLA-B, and HLA-DR matched unrelated donors. Blood 2002, 99:4200-4206. 10.1182/blood.V99.11.4200, 12010826.
-
(2002)
Blood
, vol.99
, pp. 4200-4206
-
-
Morishima, Y.1
Sasazuki, T.2
Inoko, H.3
Juji, T.4
Akaza, T.5
Yamamoto, K.6
Ishikawa, Y.7
Kato, S.8
Sao, H.9
Sakamaki, H.10
-
10
-
-
58149196190
-
The IMGT/HLA database
-
10.1093/nar/gkn662, 2686596, 18838392
-
Robinson J, Waller MJ, Fail SC, McWilliam H, Lopez R, Parham P, Marsh SG. The IMGT/HLA database. Nucleic acids research 2009, 37:D1013-1017. 10.1093/nar/gkn662, 2686596, 18838392.
-
(2009)
Nucleic acids research
, vol.37
-
-
Robinson, J.1
Waller, M.J.2
Fail, S.C.3
McWilliam, H.4
Lopez, R.5
Parham, P.6
Marsh, S.G.7
-
12
-
-
68549104404
-
The Sequence Alignment/Map format and SAMtools
-
Oxford, England, 10.1093/bioinformatics/btp352, 2723002, 19505943
-
Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. The Sequence Alignment/Map format and SAMtools. Bioinformatics 2009, 25:2078-2079. Oxford, England, 10.1093/bioinformatics/btp352, 2723002, 19505943.
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
Handsaker, B.2
Wysoker, A.3
Fennell, T.4
Ruan, J.5
Homer, N.6
Marth, G.7
Abecasis, G.8
Durbin, R.9
-
13
-
-
77956295988
-
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
-
10.1101/gr.107524.110, 20644199
-
McKenna AH, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A, Garimella K, Altshuler D, Gabriel S, Daly M, Depristo M. The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data. Genome research 2010, 20:1297-1303. 10.1101/gr.107524.110, 20644199.
-
(2010)
Genome research
, vol.20
, pp. 1297-1303
-
-
McKenna, A.H.1
Hanna, M.2
Banks, E.3
Sivachenko, A.4
Cibulskis, K.5
Kernytsky, A.6
Garimella, K.7
Altshuler, D.8
Gabriel, S.9
Daly, M.10
Depristo, M.11
-
14
-
-
33748432271
-
Nomenclature for factors of the HLA system, update May 2006
-
10.1111/j.1399-0039.2006.00660.x, 16948656
-
Marsh SG. Nomenclature for factors of the HLA system, update May 2006. Tissue antigens 2006, 68:273-275. 10.1111/j.1399-0039.2006.00660.x, 16948656.
-
(2006)
Tissue antigens
, vol.68
, pp. 273-275
-
-
Marsh, S.G.1
-
15
-
-
33845414685
-
Nomenclature for factors of the HLA system, update March 2005
-
10.1016/j.humimm.2005.10.014, 16360844
-
Marsh SG. Nomenclature for factors of the HLA system, update March 2005. Hum Immunol 2005, 66:1017-1018. 10.1016/j.humimm.2005.10.014, 16360844.
-
(2005)
Hum Immunol
, vol.66
, pp. 1017-1018
-
-
Marsh, S.G.1
-
16
-
-
70350043898
-
High-resolution, high-throughput HLA genotyping by next-generation sequencing
-
10.1111/j.1399-0039.2009.01345.x, 19845894
-
Bentley G, Higuchi R, Hoglund B, Goodridge D, Sayer D, Trachtenberg EA, Erlich HA. High-resolution, high-throughput HLA genotyping by next-generation sequencing. Tissue antigens 2009, 74:393-403. 10.1111/j.1399-0039.2009.01345.x, 19845894.
-
(2009)
Tissue antigens
, vol.74
, pp. 393-403
-
-
Bentley, G.1
Higuchi, R.2
Hoglund, B.3
Goodridge, D.4
Sayer, D.5
Trachtenberg, E.A.6
Erlich, H.A.7
-
17
-
-
77956618377
-
A novel single cDNA amplicon pyrosequencing method for high-throughput, cost-effective sequence-based HLA class-I genotyping
-
10.1016/j.humimm.2010.07.012, 20650293
-
Lank SM, Wiseman RW, Dudley DM, O'Connor DH. A novel single cDNA amplicon pyrosequencing method for high-throughput, cost-effective sequence-based HLA class-I genotyping. Hum Immunol 2010, 71:1011-1017. 10.1016/j.humimm.2010.07.012, 20650293.
-
(2010)
Hum Immunol
, vol.71
, pp. 1011-1017
-
-
Lank, S.M.1
Wiseman, R.W.2
Dudley, D.M.3
O'Connor, D.H.4
-
18
-
-
70349954786
-
Rapid high-throughput human leukocyte antigen typing by massively parallel pyrosequencing for high-resolution allele identification
-
10.1016/j.humimm.2009.08.009, 19706315
-
Gabriel C, Danzer M, Hackl C, Kopal G, Hufnagl P, Hofer K, Polin H, Stabentheiner S, Proll J. Rapid high-throughput human leukocyte antigen typing by massively parallel pyrosequencing for high-resolution allele identification. Hum Immunol 2009, 70:960-964. 10.1016/j.humimm.2009.08.009, 19706315.
-
(2009)
Hum Immunol
, vol.70
, pp. 960-964
-
-
Gabriel, C.1
Danzer, M.2
Hackl, C.3
Kopal, G.4
Hufnagl, P.5
Hofer, K.6
Polin, H.7
Stabentheiner, S.8
Proll, J.9
-
19
-
-
0037853316
-
New allele frequency database
-
10.1034/j.1399-0039.2003.00062.x, 12753660
-
Middleton D, Menchaca L, Rood H, Komerofsky R. New allele frequency database. Tissue antigens 2003, 61:403-407. 10.1034/j.1399-0039.2003.00062.x, 12753660., http://www.allelefrequencies.net
-
(2003)
Tissue antigens
, vol.61
, pp. 403-407
-
-
Middleton, D.1
Menchaca, L.2
Rood, H.3
Komerofsky, R.4
-
20
-
-
0037246882
-
IMGT/HLA and IMGT/MHC: sequence databases for the study of the major histocompatibility complex
-
10.1093/nar/gkg070, 165517, 12520010
-
Robinson J, Waller MJ, Parham P, de Groot N, Bontrop R, Kennedy LJ, Stoehr P, Marsh SG. IMGT/HLA and IMGT/MHC: sequence databases for the study of the major histocompatibility complex. Nucleic acids research 2003, 31:311-314. 10.1093/nar/gkg070, 165517, 12520010.
-
(2003)
Nucleic acids research
, vol.31
, pp. 311-314
-
-
Robinson, J.1
Waller, M.J.2
Parham, P.3
de Groot, N.4
Bontrop, R.5
Kennedy, L.J.6
Stoehr, P.7
Marsh, S.G.8
-
21
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
10.1093/nar/gkh340, 390337, 15034147
-
Edgar RC. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic acids research 2004, 32:1792-1797. 10.1093/nar/gkh340, 390337, 15034147.
-
(2004)
Nucleic acids research
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
22
-
-
0036079158
-
The human genome browser at UCSC
-
186604, 12045153
-
Kent WJ, Sugnet CW, Furey TS, Roskin KM, Pringle TH, Zahler AM, Haussler D. The human genome browser at UCSC. Genome research 2002, 12:996-1006. 186604, 12045153.
-
(2002)
Genome research
, vol.12
, pp. 996-1006
-
-
Kent, W.J.1
Sugnet, C.W.2
Furey, T.S.3
Roskin, K.M.4
Pringle, T.H.5
Zahler, A.M.6
Haussler, D.7
-
23
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Rozen S, Skaletsky H. Primer3 on the WWW for general users and for biologist programmers. Methods in molecular biology (Clifton, NJ 2000, 132:365-386.
-
(2000)
Methods in molecular biology (Clifton, NJ
, vol.132
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.2
-
24
-
-
65449188232
-
Jalview Version 2--a multiple sequence alignment editor and analysis workbench
-
Oxford, England, 10.1093/bioinformatics/btp033, 2672624, 19151095
-
Waterhouse AM, Procter JB, Martin DM, Clamp M, Barton GJ. Jalview Version 2--a multiple sequence alignment editor and analysis workbench. Bioinformatics 2009, 25:1189-1191. Oxford, England, 10.1093/bioinformatics/btp033, 2672624, 19151095.
-
(2009)
Bioinformatics
, vol.25
, pp. 1189-1191
-
-
Waterhouse, A.M.1
Procter, J.B.2
Martin, D.M.3
Clamp, M.4
Barton, G.J.5
-
25
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
1464427, 16056220
-
Margulies M, Egholm M, Altman WE, Attiya S, Bader JS, Bemben LA, Berka J, Braverman MS, Chen YJ, Chen Z, et al. Genome sequencing in microfabricated high-density picolitre reactors. Nature 2005, 437:376-380. 1464427, 16056220.
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
Egholm, M.2
Altman, W.E.3
Attiya, S.4
Bader, J.S.5
Bemben, L.A.6
Berka, J.7
Braverman, M.S.8
Chen, Y.J.9
Chen, Z.10
-
26
-
-
77953218382
-
A scalable, fully automated process for construction of sequence-ready barcoded libraries for 454
-
10.1186/gb-2010-11-2-r15, 2872875, 20137071
-
Lennon NJ, Lintner RE, Anderson S, Alvarez P, Barry A, Brockman W, Daza R, Erlich RL, Giannoukos G, Green L, et al. A scalable, fully automated process for construction of sequence-ready barcoded libraries for 454. Genome biology 2010, 11:R15. 10.1186/gb-2010-11-2-r15, 2872875, 20137071.
-
(2010)
Genome biology
, vol.11
-
-
Lennon, N.J.1
Lintner, R.E.2
Anderson, S.3
Alvarez, P.4
Barry, A.5
Brockman, W.6
Daza, R.7
Erlich, R.L.8
Giannoukos, G.9
Green, L.10
-
27
-
-
77949675926
-
Nomenclature for factors of the HLA system, 2010
-
10.1111/j.1399-0039.2010.01466.x, 2848993, 20356336
-
Marsh SG, Albert ED, Bodmer WF, Bontrop RE, Dupont B, Erlich HA, Fernandez-Vina M, Geraghty DE, Holdsworth R, Hurley CK, et al. Nomenclature for factors of the HLA system, 2010. Tissue antigens 2010, 75:291-455. 10.1111/j.1399-0039.2010.01466.x, 2848993, 20356336.
-
(2010)
Tissue antigens
, vol.75
, pp. 291-455
-
-
Marsh, S.G.1
Albert, E.D.2
Bodmer, W.F.3
Bontrop, R.E.4
Dupont, B.5
Erlich, H.A.6
Fernandez-Vina, M.7
Geraghty, D.E.8
Holdsworth, R.9
Hurley, C.K.10
-
28
-
-
77954323675
-
Nomenclature for factors of the HLA system, update February 2010
-
Marsh SG. Nomenclature for factors of the HLA system, update February 2010. Tissue antigens 2010, 76:165-170.
-
(2010)
Tissue antigens
, vol.76
, pp. 165-170
-
-
Marsh, S.G.1
|