Binding analysis of peptides that recognize preferentially cis-azobenzene groups of synthetic polymers

Journal of Peptide Science

Volumn 17, Issue 2, 2011, Pages 163-168

  Chen, J ^a   Serizawa, T ^b   Komiyama, M ^b  

^a UNIVERSITY OF TOKYO   (Japan)

^b UNIVERSITY OF TOKYO   (Japan)

Author keywords

Azobenzene; Cis trans conformers; PD; Peptide ligands; Recognition

Indexed keywords

ALANINE; ASPARAGINE; AZOBENZENE DERIVATIVE; HISTIDINE; LEUCINE; POLYMER; PROLINE; THREONINE; TRYPTOPHAN;

AMINO ACID SEQUENCE; ARTICLE; BINDING AFFINITY; DISSOCIATION CONSTANT; ISOMERISM; LIGAND BINDING; MOLECULAR RECOGNITION; PEPTIDE SYNTHESIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN STRUCTURE; QUARTZ CRYSTAL MICROBALANCE; SEQUENCE ANALYSIS; SURFACE PROPERTY;

AZO COMPOUNDS; PEPTIDES; POLYMERS;

EID: 78651445334     PISSN: 10752617     EISSN: 10991387     Source Type: Journal    
DOI: 10.1002/psc.1299     Document Type: Article

References (29)

1. Sarikaya M, Tamerler C, Schwartz DT, Baneyx FO. Materials assembly and formation using engineered polypeptides. Annu. Rev. Mater. Res. 2004; 34: 373-408.
2. Brown S. Metal-recognition by repeating polypeptides. Nat. Biotechnol. 1997; 15: 269-272.
3. Naik RR, Stringer SJ, Agarwal G, Jones SE, Stone MO. Biomimetic synthesis and patterning of silver nanoparticles. Nat. Mater. 2002; 1: 169-172.
4. Whaley SR, English DS, Hu EL, Barbara PF, Belcher AM. Selection of peptides with semiconductor binding specificity for directed nanocrystal assembly. Nature 2000; 405: 665-668.
5. Lee SW, Mao CB, Flynn CE, Belcher AM. Ordering of quantum dots using genetically engineered viruses. Science 2002; 296: 892-895.
6. Sano KI, Shiba K. A hexapeptide motif that electrostatically binds to the surface of titanium. J. Am. Chem. Soc. 2003; 125: 14234-14235.
7. Hayashi T, Sano K, Shiba K, Kumashiro Y, Iwahori K, Yamashita I, Hara M. Mechanism underlying specificity of proteins targeting inorganic materials. Nano Lett. 2006; 6: 515-519.
8. Wang SQ, Humphreys ES, Chung SY, Delduco DF, Lustig SR, Wang H, Parker KN, Rizzo NW, Subramoney S, Chiang YM, Jagota A. Peptides with selective affinity for carbon nanotubes. Nat. Mater. 2003; 2: 196-200.
9. Li XJ, Chen W, Zhan QW, Dai LM, Sowards L, Pender M, Naik RR. Direct measurements of interactions between polypeptides and carbon nanotubes. J. Phys. Chem. B 2006; 110: 12621-12625.
10. Kase D, Kulp JL, Yudasaka M, Evans JS, Iijima S, Shiba K. Affinity selection of peptide phage libraries against single-wall carbon nanohorns identifies a peptide aptamer with conformational variability. Langmuir 2004; 20: 8939-8941.
11. Morita Y, Ohsugi T, Iwasa Y, Tamiya E. A screening of phage displayed peptides for the recognition of fullerene (C60). J. Mol. Catal. B: Enzym. 2004; 28: 185-190.
12. Adey NB, Mataragnon AH, Rider JE, Carter JM, Kay BK. Characterization of phage that bind plastic from phage-displayed random peptide libraries. Gene 1995; 156: 27-31.
13. Sanghvi AB, Miller KPH, Belcher AM, Schmidt CE. Biomaterials functionalization using a novel peptide that selectively binds to a conducting polymer. Nat. Mater. 2005; 4: 496-502.
14. Serizawa T, Sawada T, Matsuno H, Matsubara T, Sato T. A peptide motif recognizing a polymer stereoregularity. J. Am. Chem. Soc. 2005; 127: 13780-13781.
15. Serizawa T, Sawada T, Kitayama T. Peptide motifs that recognize differences in polymer-film surfaces. Angew. Chem. Int. Ed. 2007; 46: 723-726.
16. Serizawa T, Techawanitchai P, Matsuno H. Isolation of peptides that can recognize syndiotactic polystyrene. Chembiochem 2007; 8: 989-993.
17. Serizawa T, Iida K, Matsuno H, Kurita K. Cellulose-binding heptapeptides identified by phage display methods. Chem. Lett. 2007; 36: 988-989.
18. Chen J, Serizawa T, Komiyama M. Peptides recognize photoresponsive targets. Angew. Chem. Int. Ed. 2009; 48: 2917-2920.
19. Matsuno H, Sekine J, Yajima H, Serizawa T. Biological selection of peptides for poly(L-lactide) substrates. Langmuir 2008; 24: 6399-6403.
20. Sano KI, Sasaki H, Shiba K. Specificity and biomineralization activities of Ti-binding peptide-1 (TBP-1). Langmuir 2005; 21: 3090-3095.
21. Slocik JM, Stone MO, Naik RR. Synthesis of gold nanoparticles using multifunctional peptides. Small 2005; 1: 1048-1052.
22. Ahmad G, Dickerson MB, Church BC, Cai Y, Jones SE, Naik RR, King JS, Summers CJ, Kroger N, Sandhage KH. Rapid, room-temperature formation of crystalline calcium molybdate phosphor microparticles via peptide-induced precipitation. Adv. Mater. 2006; 18: 1759-1763.
23. Slocik JM, Naik RR. Biologically programmed synthesis of bimetallic nanostructures. Adv. Mater. 2006; 18: 1988-1992.
24. Pender MJ, Sowards LA, Hartgerink JD, Stone MO, Naik RR. Peptide-mediated formation of single-wall carbon nanotube composites. Nano Lett. 2006; 6: 40-44.
25. Sano K, Sasaki H, Shiba K. Utilization of the pleiotropy of a peptidic aptamer to fabricate heterogeneous nanodot-containing multilayer nanostructures. J. Am. Chem. Soc. 2006; 128: 1717-1722.
26. Matsui T, Matsukawa N, Iwahori K, Sano KI, Shiba K, Yamashita I. Realizing a two-dimensional ordered array of ferritin molecules directly on a solid surface utilizing carbonaceous material affinity peptides. Langmuir 2007; 23: 1615-1618.
27. Sano K, Ajima K, Iwahori K, Yudasaka M, Iijima S, Yamashita I, Shiba K. Endowing a ferritin-like cage protein with high affinity and selectivity for certain inorganic materials. Small 2005; 1: 826-832.
28. Roberts BL, Markland W, Siranosian K, Saxena MJ, Guterman SK, Ladner RC. Protease inhibitor display M13-phage-selection of high-affinity neutrophil elastase inhibitors. Gene 1992; 121: 9-15.
29. Serizawa T, Sawada T, Matsuno H. Highly specific affinities of short peptides against synthetic polymers. Langmuir 2007; 23: 11127-11133.