-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0027254706
-
Neisseria weaveri sp. nov., formerly CDC group M-5, a gram-negative bacterium associated with dog bite wounds
-
Andersen, B. M., Steigerwalt, A. G., O'Connor, S. P., Hollis, D. G., Weyant, R. S., Weaver, R. E. & Brenner, D. J. (1993). Neisseria weaveri sp. nov., formerly CDC group M-5, a gram-negative bacterium associated with dog bite wounds. J Clin Microbiol 31, 2456-2466.
-
(1993)
J Clin Microbiol
, vol.31
, pp. 2456-2466
-
-
Andersen, B.M.1
Steigerwalt, A.G.2
O'Connor, S.P.3
Hollis, D.G.4
Weyant, R.S.5
Weaver, R.E.6
Brenner, D.J.7
-
3
-
-
0345129514
-
Studies on asaccharolytic Neisseria in the human nasopharynx
-
Berger, U. & Paepcke, E. (1962). Studies on asaccharolytic Neisseria in the human nasopharynx. Z Hyg Infektionskr 148, 269-281.
-
(1962)
Z Hyg Infektionskr
, vol.148
, pp. 269-281
-
-
Berger, U.1
Paepcke, E.2
-
4
-
-
0014709863
-
Neisseria elongata sp. nov., a rodshaped member of the genus Neisseria. Re-evaluation of cell shape as a criterion in classification
-
Bøvre, K. & Holten, E. (1970). Neisseria elongata sp. nov., a rodshaped member of the genus Neisseria. Re-evaluation of cell shape as a criterion in classification. J Gen Microbiol 60, 67-75.
-
(1970)
J Gen Microbiol
, vol.60
, pp. 67-75
-
-
Bøvre, K.1
Holten, E.2
-
5
-
-
0017758250
-
A rapid method for the base ratio determination of bacterial DNA
-
Cashion, P., Holder-Franklin, M. A., McCully, J. & Franklin, M. (1977). A rapid method for the base ratio determination of bacterial DNA. Anal Biochem 81, 461-466.
-
(1977)
Anal Biochem
, vol.81
, pp. 461-466
-
-
Cashion, P.1
Holder-Franklin, M.A.2
McCully, J.3
Franklin, M.4
-
6
-
-
35648991375
-
EzTaxon: A web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences
-
Chun, J., Lee, J. H., Jung, Y., Kim, M., Kim, S., Kim, B. K. & Lim, Y. W. (2007). EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57, 2259-2261.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 2259-2261
-
-
Chun, J.1
Lee, J.H.2
Jung, Y.3
Kim, M.4
Kim, S.5
Kim, B.K.6
Lim, Y.W.7
-
7
-
-
50249162546
-
Complete genome sequence of Neisseria gonorrhoeae NCCP11945
-
Chung, G. T., Yoo, J. S., Oh, H. B., Lee, Y. S., Cha, S. H., Kim, S. J. & Yoo, C. K. (2008). Complete genome sequence of Neisseria gonorrhoeae NCCP11945. J Bacteriol 190, 6035-6036.
-
(2008)
J Bacteriol
, vol.190
, pp. 6035-6036
-
-
Chung, G.T.1
Yoo, J.S.2
Oh, H.B.3
Lee, Y.S.4
Cha, S.H.5
Kim, S.J.6
Yoo, C.K.7
-
8
-
-
5644227319
-
Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases
-
Clarridge, J. E., III (2004). Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases. Clin Microbiol Rev 17, 840-862.
-
(2004)
Clin Microbiol Rev
, vol.17
, pp. 840-862
-
-
Clarridge III, J.E.1
-
9
-
-
0014713693
-
The quantitative measurement of DNA hybridization from renaturation rates
-
De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
-
(1970)
Eur J Biochem
, vol.12
, pp. 133-142
-
-
De Ley, J.1
Cattoir, H.2
Reynaerts, A.3
-
10
-
-
0003609344
-
Overview of bacterial identification methods and strategies
-
10th edn, Edited by J. Roche. St Louis, MO: Mosby
-
Forbes, B. A., Sahm, D. F. & Weissfeld, A. S. (1998). Overview of bacterial identification methods and strategies. In Bailey and Scott's Diagnostic Microbiology, 10th edn, pp. 424-446. Edited by J. Roche. St Louis, MO: Mosby.
-
(1998)
Bailey and Scott's Diagnostic Microbiology
, pp. 424-446
-
-
Forbes, B.A.1
Sahm, D.F.2
Weissfeld, A.S.3
-
11
-
-
78651434102
-
Media and methods
-
US Department of Agriculture Handbook No. 427, Washington, DC: US Government Printing Office
-
Gordon, R. E., Haynes, W. C. & Pang, C. H. (1973). Media and methods. In The Genus Bacillus, US Department of Agriculture Handbook no. 427, pp. 2-14. Washington, DC: US Government Printing Office.
-
(1973)
The Genus Bacillus
, pp. 2-14
-
-
Gordon, R.E.1
Haynes, W.C.2
Pang, C.H.3
-
12
-
-
32344453094
-
Neisseria bacilliformis sp. nov. isolated from human infections
-
Han, X. Y., Hong, T. & Falsen, E. (2006). Neisseria bacilliformis sp. nov. isolated from human infections. J Clin Microbiol 44, 474-479.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 474-479
-
-
Han, X.Y.1
Hong, T.2
Falsen, E.3
-
13
-
-
0027445150
-
Neisseria weaveri sp. nov. (formerly CDC group M-5), from dog bite wounds of humans
-
Holmes, B., Costas, M., On, S. L. W., Vandamme, P., Falsen, E. & Kersters, K. (1993). Neisseria weaveri sp. nov. (formerly CDC group M-5), from dog bite wounds of humans. Int J Syst Bacteriol 43, 687-693.
-
(1993)
Int J Syst Bacteriol
, vol.43
, pp. 687-693
-
-
Holmes, B.1
Costas, M.2
On, S.L.W.3
Vandamme, P.4
Falsen, E.5
Kersters, K.6
-
14
-
-
33644935021
-
Evaluation of 23S rRNA PCR primers for use in phylogenetic studies of bacterial diversity
-
Hunt, D. E., Klepac-Ceraj, V., Acinas, S. G., Gautier, C., Bertilsson, S. & Polz, M. F. (2006). Evaluation of 23S rRNA PCR primers for use in phylogenetic studies of bacterial diversity. Appl Environ Microbiol 72, 2221-2225.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 2221-2225
-
-
Hunt, D.E.1
Klepac-Ceraj, V.2
Acinas, S.G.3
Gautier, C.4
Bertilsson, S.5
Polz, M.F.6
-
15
-
-
0020549589
-
Studies on the spectrophotometric determination of DNA hybridization from renaturation rates
-
Huß, V. A. R., Festl, H. & Schleifer, K. H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184-192.
-
(1983)
Syst Appl Microbiol
, vol.4
, pp. 184-192
-
-
Huß, V.A.R.1
Festl, H.2
Schleifer, K.H.3
-
16
-
-
79954544039
-
Identification of aerobic Gram-negative bacteria
-
2nd edn, Edited by E. Goldman & L. H. Green. Boca Raton, FL: CRC Press
-
Kohlerschmidt, D. J., Musser, K. A. & Dumas, N. B. (2009). Identification of aerobic Gram-negative bacteria. In Practical Handbook of Microbiology, 2nd edn, pp. 67-80. Edited by E. Goldman & L. H. Green. Boca Raton, FL: CRC Press.
-
(2009)
Practical Handbook of Microbiology
, pp. 67-80
-
-
Kohlerschmidt, D.J.1
Musser, K.A.2
Dumas, N.B.3
-
17
-
-
0028015963
-
PCR-based preparation of 23S rRNA-targeted group-specific polynucleotide probes
-
Ludwig, W., Dorn, S., Springer, N., Kirchhof, G. & Schleifer, K. H. (1994). PCR-based preparation of 23S rRNA-targeted group-specific polynucleotide probes. Appl Environ Microbiol 60, 3236-3244.
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 3236-3244
-
-
Ludwig, W.1
Dorn, S.2
Springer, N.3
Kirchhof, G.4
Schleifer, K.H.5
-
18
-
-
0034732226
-
Complete DNA sequence of a serogroup a strain of Neisseria meningitidis Z2491
-
Parkhill, J., Achtman, M., James, K. D., Bentley, S. D., Churcher, C., Klee, S. R., Morelli, G., Basham, D., Brown, D. & other authors (2000). Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491. Nature 404, 502-506.
-
(2000)
Nature
, vol.404
, pp. 502-506
-
-
Parkhill, J.1
Achtman, M.2
James, K.D.3
Bentley, S.D.4
Churcher, C.5
Klee, S.R.6
Morelli, G.7
Basham, D.8
Brown, D.9
-
19
-
-
0035171553
-
Evaluation of pulsed-field gel electrophoresis in epidemiological investigations of meningococcal disease outbreaks caused by Neisseria meningitidis serogroup C
-
Popovic, T., Schmink, S., Rosenstein, N. A., Ajello, G. W., Reeves, M. W., Plikaytis, B., Hunter, S. B., Ribot, E. M., Boxrud, D. & other authors (2001). Evaluation of pulsed-field gel electrophoresis in epidemiological investigations of meningococcal disease outbreaks caused by Neisseria meningitidis serogroup C. J Clin Microbiol 39, 75-85.
-
(2001)
J Clin Microbiol
, vol.39
, pp. 75-85
-
-
Popovic, T.1
Schmink, S.2
Rosenstein, N.A.3
Ajello, G.W.4
Reeves, M.W.5
Plikaytis, B.6
Hunter, S.B.7
Ribot, E.M.8
Boxrud, D.9
-
20
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist, F. & Huelsenbeck, J. P. (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
21
-
-
0029809918
-
A new species of Neisseria from the dental plaque of the domestic cow, Neisseria dentiae sp. nov
-
Sneath, P. H. & Barrett, S. J. (1996). A new species of Neisseria from the dental plaque of the domestic cow, Neisseria dentiae sp. nov. Lett Appl Microbiol 23, 355-358.
-
(1996)
Lett Appl Microbiol
, vol.23
, pp. 355-358
-
-
Sneath, P.H.1
Barrett, S.J.2
-
22
-
-
0029134774
-
Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: Criteria for bacterial strain typing
-
Tenover, F. C., Arbeit, R. D., Goering, R. V., Mickelsen, P. A., Murray, B. E., Persing, D. H. & Swaminathan, B. (1995). Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing. J Clin Microbiol 33, 2233-2239.
-
(1995)
J Clin Microbiol
, vol.33
, pp. 2233-2239
-
-
Tenover, F.C.1
Arbeit, R.D.2
Goering, R.V.3
Mickelsen, P.A.4
Murray, B.E.5
Persing, D.H.6
Swaminathan, B.7
-
23
-
-
76849088617
-
Notes on the characterization of prokaryote strains for taxonomic purposes
-
Tindall, B. J., Rosselló-Mora, R., Busse, H.-J., Ludwig, W. & Kämpfer, P. (2010). Notes on the characterization of prokaryote strains for taxonomic purposes. Int J Syst Evol Microbiol 60, 249-266.
-
(2010)
Int J Syst Evol Microbiol
, vol.60
, pp. 249-266
-
-
Tindall, B.J.1
Rosselló-Mora, R.2
Busse, H.-J.3
Ludwig, W.4
Kämpfer, P.5
-
24
-
-
33947357634
-
AL
-
2nd edn, Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer
-
AL. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2C, pp. 777-798. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
-
(2005)
Bergey's Manual of Systematic Bacteriology
, vol.2 C
, pp. 777-798
-
-
Tønjum, T.1
-
25
-
-
0027182309
-
Amplification and sequencing of variable regions in bacterial 23S ribosomal RNA genes with conserved primer sequences
-
Van Camp, G., Chapelle, S. & De Wachter, R. (1993). Amplification and sequencing of variable regions in bacterial 23S ribosomal RNA genes with conserved primer sequences. Curr Microbiol 27, 147-151.
-
(1993)
Curr Microbiol
, vol.27
, pp. 147-151
-
-
Van Camp, G.1
Chapelle, S.2
De Wachter, R.3
-
26
-
-
33747881868
-
Classification of Centers for Disease Control Group Eugonic Fermenter (EF)-4a and EF-4b as Neisseria animaloris sp. nov. and Neisseria zoodegmatis sp. nov., respectively
-
Vandamme, P., Holmes, B., Bercovier, H. & Coenye, T. (2006). Classification of Centers for Disease Control Group Eugonic Fermenter (EF)-4a and EF-4b as Neisseria animaloris sp. nov. and Neisseria zoodegmatis sp. nov., respectively. Int J Syst Evol Microbiol 56, 1801-1805.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 1801-1805
-
-
Vandamme, P.1
Holmes, B.2
Bercovier, H.3
Coenye, T.4
-
27
-
-
0000770675
-
Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
-
International Committee on Systematic Bacteriology
-
Wayne, L. G., Brenner, D. J., Colwell, R. R., Grimont, P. A. D., Kandler, O., Krichevsky, M. I., Moore, L. H., Moore, W. E. C., Murray, R. G. E. & other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
-
(1987)
Int J Syst Bacteriol
, vol.37
, pp. 463-464
-
-
Wayne, L.G.1
Brenner, D.J.2
Colwell, R.R.3
Grimont, P.A.D.4
Kandler, O.5
Krichevsky, M.I.6
Moore, L.H.7
Moore, W.E.C.8
Murray, R.G.E.9
-
28
-
-
0003668713
-
-
2nd edn. Baltimore, MD: Williams & Wilkins
-
Weyant, R. S., Moss, C. W., Weaver, R. E., Hollis, D. G., Jordan, J. G., Cook, E. C. & Daneshvar, M. I. (1984). Identification of Unusual Pathogenic Gram-Negative Aerobic and Facultatively Anaerobic Bacteria, 2nd edn. Baltimore, MD: Williams & Wilkins.
-
(1984)
Identification of Unusual Pathogenic Gram-Negative Aerobic and Facultatively Anaerobic Bacteria
-
-
Weyant, R.S.1
Moss, C.W.2
Weaver, R.E.3
Hollis, D.G.4
Jordan, J.G.5
Cook, E.C.6
Daneshvar, M.I.7
-
29
-
-
0034053725
-
A greedy algorithm for aligning DNA sequences
-
Zhang, Z., Schwartz, S., Wagner, L. & Miller, W. (2000). A greedy algorithm for aligning DNA sequences. J Comput Biol 7, 203-214.
-
(2000)
J Comput Biol
, vol.7
, pp. 203-214
-
-
Zhang, Z.1
Schwartz, S.2
Wagner, L.3
Miller, W.4
|