-
1
-
-
26444505936
-
Translational and clinical science-time for a new vision
-
Zerhouni, E.A.: Translational and clinical science-time for a new vision. New England Journal of Medicine 353(15), 1621 (2005)
-
(2005)
New England Journal of Medicine
, vol.353
, Issue.15
, pp. 1621
-
-
Zerhouni, E.A.1
-
2
-
-
25144505285
-
US biomedical research: Basic, translational, and clinical sciences
-
Zerhouni, E.A.: US biomedical research: basic, translational, and clinical sciences. Jama 294(11), 1352 (2005)
-
(2005)
Jama
, vol.294
, Issue.11
, pp. 1352
-
-
Zerhouni, E.A.1
-
3
-
-
20444364159
-
Breaking the translational barriers: The value of integrating biomedical informatics and translational research
-
Payne, P.R.O., Johnson, S.B., Starren, J.B., Tilson, H.H., Dowdy, D.: Breaking the translational barriers: the value of integrating biomedical informatics and translational research. Journal of Investigative Medicine 53(4), 192 (2005)
-
(2005)
Journal of Investigative Medicine
, vol.53
, Issue.4
, pp. 192
-
-
Payne, P.R.O.1
Johnson, S.B.2
Starren, J.B.3
Tilson, H.H.4
Dowdy, D.5
-
4
-
-
41149091722
-
Provenance trails in the Wings/Pegasus system
-
Kim, J., Deelman, E., Gil, Y., Mehta, G., Ratnakar, V.: Provenance trails in the Wings/Pegasus system. Concurrency and Computation: Practice and Experience 20(5), 587-597 (2008)
-
(2008)
Concurrency and Computation: Practice and Experience
, vol.20
, Issue.5
, pp. 587-597
-
-
Kim, J.1
Deelman, E.2
Gil, Y.3
Mehta, G.4
Ratnakar, V.5
-
5
-
-
41149169664
-
Mining taverna's semantic web of provenance
-
Zhao, J., Goble, C., Stevens, R., Turi, D.: Mining taverna's semantic web of provenance. Concurrency and Computation: Practice and Experience 20(5), 463-472 (2008)
-
(2008)
Concurrency and Computation: Practice and Experience
, vol.20
, Issue.5
, pp. 463-472
-
-
Zhao, J.1
Goble, C.2
Stevens, R.3
Turi, D.4
-
6
-
-
41149134435
-
Tackling the provenance challenge one layer at a time
-
Scheidegger, C., Koop, D., Santos, E., Vo, H., Callahan, S., Freire, J., Silva, C.: Tackling the provenance challenge one layer at a time. Concurrency And Computation 20(5), 473 (2008)
-
(2008)
Concurrency and Computation
, vol.20
, Issue.5
, pp. 473
-
-
Scheidegger, C.1
Koop, D.2
Santos, E.3
Vo, H.4
Callahan, S.5
Freire, J.6
Silva, C.7
-
7
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Series B (Methodological)
-
Benjamini, Y., Hochberg, Y.: Controlling the false discovery rate: a practical and powerful approach to multiple testing. Journal of the Royal Statistical Society. Series B (Methodological), 289-300 (1995)
-
(1995)
Journal of the Royal Statistical Society
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
8
-
-
33751058375
-
Position statement: Musings on provenance, workflow and (Semantic web) annotations for bioinformatics
-
Chicago
-
Goble, C.: Position statement: Musings on provenance, workflow and (Semantic web) annotations for bioinformatics. In: Workshop on Data Derivation and Provenance, Chicago (2002)
-
(2002)
Workshop on Data Derivation and Provenance
-
-
Goble, C.1
-
9
-
-
18344396568
-
Minimum information about a microarray experiment (MIAME)-toward standards for microarray data
-
Brazma, A., Hingamp, P., Quackenbush, J., Sherlock, G., Spellman, P., Stoeckert, C., Aach, J., Ansorge, W., Ball, C., Causton, H., et al.: Minimum information about a microarray experiment (MIAME)-toward standards for microarray data. Nature genetics 29(4), 365-372 (2001)
-
(2001)
Nature Genetics
, vol.29
, Issue.4
, pp. 365-372
-
-
Brazma, A.1
Hingamp, P.2
Quackenbush, J.3
Sherlock, G.4
Spellman, P.5
Stoeckert, C.6
Aach, J.7
Ansorge, W.8
Ball, C.9
Causton, H.10
-
10
-
-
58149182724
-
NCBI GEO: Archive for high-throughput functional genomic data
-
Barrett, T., Troup, D.B., Wilhite, S.E., Ledoux, P., Rudnev, D., Evangelista, C., Kim, I.F., Soboleva, A., Tomashevsky, M., Marshall, K.A., Phillippy, K.H., Sherman, P.M., Muertter, R.N., Edgar, R.: NCBI GEO: archive for high-throughput functional genomic data. Nucl. Acids Res. 37(suppl. 1), D885-D890 (2009)
-
(2009)
Nucl. Acids Res.
, vol.37
, Issue.SUPPL. 1
-
-
Barrett, T.1
Troup, D.B.2
Wilhite, S.E.3
Ledoux, P.4
Rudnev, D.5
Evangelista, C.6
Kim, I.F.7
Soboleva, A.8
Tomashevsky, M.9
Marshall, K.A.10
Phillippy, K.H.11
Sherman, P.M.12
Muertter, R.N.13
Edgar, R.14
-
11
-
-
58149204055
-
ArrayExpress update-from an archive of functional genomics experiments to the atlas of gene expression
-
Parkinson, H., Kapushesky, M., Kolesnikov, N., Rustici, G., Shojatalab, M., Abeygunawardena, N., Berube, H., Dylag,M., Emam, I., Farne, A., et al.: ArrayExpress update-from an archive of functional genomics experiments to the atlas of gene expression. In: Nucleic Acids Research (2008)
-
(2008)
Nucleic Acids Research
-
-
Parkinson, H.1
Kapushesky, M.2
Kolesnikov, N.3
Rustici, G.4
Shojatalab, M.5
Abeygunawardena, N.6
Berube, H.7
Dylag, M.8
Emam, I.9
Farne, A.10
-
12
-
-
2942702226
-
The tissue microarray data exchange specification: A community-based, open source tool for sharing tissue microarray data
-
Berman, J., Edgerton, M., Friedman, B.: The tissue microarray data exchange specification: A community-based, open source tool for sharing tissue microarray data. BMC Medical Informatics and Decision Making 3(1), 5 (2003)
-
(2003)
BMC Medical Informatics and Decision Making
, vol.3
, Issue.1
, pp. 5
-
-
Berman, J.1
Edgerton, M.2
Friedman, B.3
-
13
-
-
50649104772
-
-
Moreau, L., Miles, S., Missier, P., Simmhan, Y., Futrelle, J., Myers, J., Stephan, E., Kwasnikowska, N., den Bussche, J.V., Freire, J., et al.: The open provenance model (v1. 1) (2009)
-
(2009)
The Open Provenance Model (v1. 1)
-
-
Moreau, L.1
Miles, S.2
Missier, P.3
Simmhan, Y.4
Futrelle, J.5
Myers, J.6
Stephan, E.7
Kwasnikowska, N.8
Den Bussche, J.V.9
Freire, J.10
-
14
-
-
51849084698
-
Pml 2: A modular explanation interlingua
-
McGuinness, D., Ding, L., Pinheiro da Silva, P., Chang, C.: Pml 2: A modular explanation interlingua. In: Proceedings of AAAI, vol. 7 (2007)
-
(2007)
Proceedings of AAAI
, vol.7
-
-
McGuinness, D.1
Ding, L.2
Pinheiro Da Silva, P.3
Chang, C.4
-
17
-
-
33845643077
-
A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB
-
Rayner, T., Rocca-Serra, P., Spellman, P., Causton, H., Farne, A., Holloway, E., Irizarry, R., Liu, J., Maier, D., Miller, M., Petersen, K., Quackenbush, J., Sherlock, G., Stoeckert, C., White, J., Whetzel, P., Wymore, F., Parkinson, H., Sarkans, U., Ball, C., Brazma, A.: A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB. BMC Bioinformatics 7(1), 489 (2006)
-
(2006)
BMC Bioinformatics
, vol.7
, Issue.1
, pp. 489
-
-
Rayner, T.1
Rocca-Serra, P.2
Spellman, P.3
Causton, H.4
Farne, A.5
Holloway, E.6
Irizarry, R.7
Liu, J.8
Maier, D.9
Miller, M.10
Petersen, K.11
Quackenbush, J.12
Sherlock, G.13
Stoeckert, C.14
White, J.15
Whetzel, P.16
Wymore, F.17
Parkinson, H.18
Sarkans, U.19
Ball, C.20
Brazma, A.21
more..
-
18
-
-
78651079671
-
-
Bian, X., Klemm, J., Basu, A., Hadfield, J., Srinivasa, R., Parnell, T., Miller, S., Mason, W., Kokotov, D., Duncan, M., et al.: Data submission and curation for caArray, a standard based microarray data repository system (2009)
-
(2009)
Data Submission and Curation for CaArray, A Standard Based Microarray Data Repository System
-
-
Bian, X.1
Klemm, J.2
Basu, A.3
Hadfield, J.4
Srinivasa, R.5
Parnell, T.6
Miller, S.7
Mason, W.8
Kokotov, D.9
Duncan, M.10
-
19
-
-
47249128234
-
ArrayWiki: An enabling technology for sharing public microarray data repositories and meta-analyses
-
Stokes, T., Torrance, J., Li, H., Wang, M.: ArrayWiki: an enabling technology for sharing public microarray data repositories and meta-analyses. BMC bioinformatics 9(Suppl 6), S18 (2008)
-
(2008)
BMC Bioinformatics
, vol.9
, Issue.SUPPL. 6
-
-
Stokes, T.1
Torrance, J.2
Li, H.3
Wang, M.4
-
20
-
-
0031169889
-
The ontolingua server: A tool for collaborative ontology construction
-
Farquhar, A., Fikes, R., Rice, J.: The ontolingua server: A tool for collaborative ontology construction. International Journal of Human-Computers Studies 46(6), 707-727 (1997)
-
(1997)
International Journal of Human-Computers Studies
, vol.46
, Issue.6
, pp. 707-727
-
-
Farquhar, A.1
Fikes, R.2
Rice, J.3
-
21
-
-
33750283757
-
Framework-specific modeling languages with round-trip engineering
-
Wang, J., Whittle, J., Harel, D., Reggio, G. (eds.) MoDELS 2006, Springer, Heidelberg
-
Antkiewicz, M., Czarnecki, K.: Framework-specific modeling languages with round-trip engineering. In: Wang, J., Whittle, J., Harel, D., Reggio, G. (eds.) MoDELS 2006. LNCS, vol. 4199, p. 692. Springer, Heidelberg (2006)
-
(2006)
LNCS
, vol.4199
, pp. 692
-
-
Antkiewicz, M.1
Czarnecki, K.2
-
22
-
-
84961838355
-
Data lineage model for Taverna workflows with lightweight annotation requirements
-
Freire, J., Koop, D., Moreau, L. (eds.) IPAW 2008, Springer, Heidelberg
-
Missier, P., Belhajjame, K., Zhao, J., Goble, C.: Data lineage model for Taverna workflows with lightweight annotation requirements. In: Freire, J., Koop, D., Moreau, L. (eds.) IPAW 2008. LNCS, vol. 5272, pp. 17-30. Springer, Heidelberg (2008)
-
(2008)
LNCS
, vol.5272
, pp. 17-30
-
-
Missier, P.1
Belhajjame, K.2
Zhao, J.3
Goble, C.4
-
23
-
-
33645277092
-
The MGED Ontology: A resource for semantics-based description of microarray experiments
-
Whetzel, P., Parkinson, H., Causton, H., Fan, L., Fostel, J., Fragoso, G., Game, L., Heiskanen, M., Morrison, N., Rocca-Serra, P., et al.: The MGED Ontology: a resource for semantics-based description of microarray experiments. Bioinformatics 22(7), 866 (2006)
-
(2006)
Bioinformatics
, vol.22
, Issue.7
, pp. 866
-
-
Whetzel, P.1
Parkinson, H.2
Causton, H.3
Fan, L.4
Fostel, J.5
Fragoso, G.6
Game, L.7
Heiskanen, M.8
Morrison, N.9
Rocca-Serra, P.10
-
24
-
-
78651065818
-
Representing high throughput biomedical experiments using the open provenance model
-
Technical report, Tetherless World Constellation, Rensselaer Polytechnic Institute, USA
-
McCusker, J.P., McGuinness, D.L.: Representing high throughput biomedical experiments using the open provenance model. Technical report, Technical Report TW-2010-14, Tetherless World Constellation, Rensselaer Polytechnic Institute, USA (2010)
-
(2010)
Technical Report TW-2010-14
-
-
McCusker, J.P.1
McGuinness, D.L.2
-
25
-
-
0242490780
-
Cytoscape: A software environment for integrated models of biomolecular interaction networks
-
Shannon, P., Markiel, A., Ozier, O., Baliga, N., Wang, J., Ramage, D., Amin, N., Schwikowski, B., Ideker, T.: Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome research 13(11), 2498 (2003)
-
(2003)
Genome Research
, vol.13
, Issue.11
, pp. 2498
-
-
Shannon, P.1
Markiel, A.2
Ozier, O.3
Baliga, N.4
Wang, J.5
Ramage, D.6
Amin, N.7
Schwikowski, B.8
Ideker, T.9
|