A simple and rapid method for DNA isolation from xylophagous insects

International Journal of Molecular Sciences

Volumn 11, Issue 12, 2010, Pages 5056-5064

  Calderón Cortés, Nancy ^a   Quesada, Mauricio ^a   Cano Camacho, Horacio ^b   Zavala Páramo, Guadalupe ^b  

^a INSTITUTO DE MATEMÁTICAS   (Mexico)

^b UNIVERSIDAD MICHOACANA DE SAN NICOLÁS DE HIDALGO   (Mexico)

Author keywords

Cerambycidae; DNA isolation; Oncideres albomarginata chamela; PCR; Phenolics; Restriction digestion; Xylophagous insects

Indexed keywords

CETRIMIDE; DNA; POVIDONE; POLYVINYLPOLYPYRROLIDONE;

ARTICLE; COLEOPTERA; CONTROLLED STUDY; DNA ISOLATION; NONHUMAN; POLYMERASE CHAIN REACTION; RELIABILITY; RESTRICTION MAPPING; ANALOGS AND DERIVATIVES; ANIMAL; BEETLE; CHEMISTRY; ISOLATION AND PURIFICATION;

CERAMBYCIDAE; HEXAPODA; ONCIDERES;

ANIMALS; BEETLES; CETRIMONIUM COMPOUNDS; DNA; POVIDONE;

EID: 78650971904     PISSN: None     EISSN: 14220067     Source Type: Journal    
DOI: 10.3390/ijms11125056     Document Type: Article

References (32)

1. Amman, G.D. The role of the mountain pine beetle in lodgepole pine ecosystems: impact on sucession. In The Role of Arthropods in Forest Ecosystems; Mattson, W.J., Ed.; Springer-Verlag: New York, NY, USA, 1976.
2. Schowalter, T.D. Insect herbivore relationship to the state of the host plant: biotic regulation of the ecosystem nutrient cycling through ecological succession. Oikos 1981, 37, 126-130.
3. Feller, I.C. The role of herbivory by wood-boring insects in mangrove ecosystems in Belize. Oikos 2002, 97, 167-176.
4. Allison, J.D.; Borden, J.H.; Seybold, S.T. A review of the chemical ecology of the Cerambycidae (Coleoptera). Chemoecology 2004, 14, 123-150.
5. Knizek, M.; Beave, R. Taxonomy and systematic of bark and Ambrosia beetles. In Bark and Wood-Boring Insects in Living Trees in Europe, a Synthesis; Lieutier, F., Day, K.R., Battisti, A., Grégoire, J.C., Evans, H., Eds.; Kluwer Academic Publishers: Dordrecht, The Netherlands, 2004.
6. Caterino, M.S.; Cho, S.; Sperling, F.A.H. The current state of insect molecular systematics: a thriving tower of Babel. Annu. Rev. Entomol. 2000, 45, 1-54.
7. Brockerhoff, E.G.; Liebhold, A.M.; Jactel, H. The ecology of forest insect invasions and advances in their management. Can. J. Forest Res. 2006, 36, 263-268.
8. Strauss, S.Y.; Zangerl, A.R. Plant-insect interactions in terrestrial ecosystems. In Plant-Animal Interactions: An Evolutionary Approach; Herrera, C.M., Pellmyr, O., Eds.; Blackwell Publishing: Oxford, UK, 2002.
9. Chown, S.L.; Nicolson, S.W. Insect Physiological Ecology; Oxford University Press: Oxford, UK, 2004.
10. Henry, J.M.; Raina, A.K.; Ridgway, R.L. Isolation of High Molecular-weight DNA from insects. Anal. Res. 1990, 185, 147-150.
11. Aljanabi, S.M.; Martinez, I. Universal and rapid salt-extraction of high quality genomic DNA for PCR-based techniques. Nucleic Acids Res. 1997, 25, 4692-4693.
12. Reineke, A.; Karlovsky, P.; Zebitz, P.W. Preparation and purification of DNA from insects for AFLP analysis. Insect Mol. Biol. 1998, 7, 95-99.
13. Hill, C.A.; Gutierrez, J.A. A method for extraction and analysis of high quality genomic DNA from ixodid ticks. Med. Vet. Entomol. 2003, 17, 224-227.
14. Juen, A.; Traugott, M. Amplification facilitators and multiplex PCR: tools to overcome PCR-inhibition in DNA-gut-content analysis of soil-living invertebrates. Soil Biol. Biochem. 2006, 38, 1872-1879.
15. Stone, G.N.; Challis, R.J.; Atkinson, R.J.; Csóka, G.; Hayward, A.; Melika, G.; Mutun, S.; Preuss, S.; Rokas, A.; Sadeghi, E.; Schönrogge, K. The phylogeographical clade trade: tracing the impact of human-mediated dispersal on the colonization of northern Europe by the oak gallwasp Andricus kollari. Mol. Ecol. 2007, 16, 2768-2781.
16. Ball, S.L.; Armstrong, K.F. Rapid, one step DNA extraction for insect pest identification using barcodes. J. Econ. Entomol. 2008, 101, 523-532.
17. Serrano, M.G.; Nunes, L.R.; Campaner, M.; Buck, G.A.; Camargo E.P. Trypanosomatidae: Phytomonas detection in plants and phytophagous insects by PCR amplification of a genus-specific sequence of the spliced leader gene. Exp. Parasitol. 1999, 91, 268-279.
18. Lodhi, M.A.; Ye, G.N.; Weeden, N.F.; Reisch, B.I. A simple and efficient method for DNA extraction from gravepine cultivars, Vitis species and Ampelopsis. Plant Mol. Biol. Rep. 1994, 12, 6-13.
19. Zidani, S.; Ferchichi, A.; Chaieb, M. Genomic DNA extraction method from pearl millet (Pennisetum glaucum) Leaves. Afr. J. Biotechnol. 2005, 4, 862-866.
20. Couch, J.A.; Fritz, P.J. Isolation of DNA from plants high in polyphenolics. Plant Mol. Biol. Rep. 1990, 8, 8-12.
21. Kim, C.S.; Lee, C.H.; Shin, J.S.; Chung, Y.S.; Hyung, N.I. A simple and rapid method for isolation of high quality genomic DNA from fruit trees and conifers using PVP. Nucleic Acids Res. 1997, 25, 1085-1086.
22. Horne, E.C.; Kumpatla, S.P.; Patterson, M.G.; Thompson, S.A. Improved high-throughput sunflower and cotton genomic DNA extraction and PCR fidelity. Plant Mol. Biol. Rep. 2004, 22, 83a-83i.
23. Friar, E.A. Isolation of DNA from plants with large amounts of secondary metabolites. Method Enzymol. 2005, 395, 3-14.
24. Padmalatha, K.; Prasad, M.N.V. Optimization of DNA isolation and PCR protocol for RAPD analysis of selected medicinal and aromatic plants of conservation concern from Peninsular India. Afr. J. Biotechnol. 2006, 5, 230-234.
25. Arif, I.A.; Bakir, M.A.; Khan, H.A.; Ahamed, A.; Al Farhan, A.H.; Al Homaidan, A.A.; Al Sadoon, M.; Bahkali, A.H.; Shobrak, M. A simple method for DNA extraction from mature date palm leaves: impact of sand grinding and composition of lysis buffer. Int. J. Mol. Sci. 2010, 11, 3149-3157.
26. Chen, D.H.; Ronald, P.C. A rapid DNA minipreparation method suitable for AFLP and other PCR applications. Plant Mol. Biol. Rep. 1999, 17, 53-57.
27. Li, J.T.; Yang, J.; Chen, D.C.; Zhang, X.L.; Tang, Z.S. An optimized mini-preparation method to obtain high-quality genomic DNA from mature leaves of sunflower. Gen. Mol. Res. 2007, 6, 1064-1071.
28. Feeley, C.J.; Hart, E.R.; Thompson, J.R.; Harrington, T.C. Ocurrence, associated symptoms, and potential insect vectors of the ash yellows phytoplasma in Iowa, U.S. J. Arboric. 2001, 27, 331-340.
29. Doyle, J.J.; Doyle, J.L. Isolation of plant DNA from fresh tissue. Focus 1990, 12, 13-15.
30. Puchooa, D.; Venkatasamy, K. A protocol for the isolation of DNA from Trochetia boutoniana. Int. J. Agric. Biol. 2005, 7, 82-85.
31. Michiels, A.; van den Ende, W.; Tucker, M.; van Riet, L.; van Laere, A. Extraction of high-quality genomic DNA from latex-containing plants. Anal. Biochem. 2003, 315, 85-89.
32. Calderón, C.N. Center for Ecosystems Research (CIEco), National Autonomous University of Mexico (UNAM), Morelia, Mich, Mexico. Unpublished work, 2010.