Reclassification of the butternut canker fungus, Sirococcus clavigignenti-juglandacearum, into the genus Ophiognomonia

Fungal Biology

Volumn 115, Issue 1, 2011, Pages 70-79

  Broders, K D ^a   Boland, G J ^a  

^a UNIVERSITY OF GUELPH   (Canada)

Author keywords

Ascomyceta; Butternut canker; Forest pathology; Gnomoniaceae; Juglandaceae; Multilocus phylogenetics

Indexed keywords

FUNGAL PROTEIN;

ASEXUAL REPRODUCTION; BOOTSTRAPPING; DECIDUOUS TREE; FUNGAL DISEASE; MORPHOLOGY; PHYLOGENETICS; POPULATION DECLINE; TAXONOMY;

ARTICLE; ASCOMYCETES; CLASSIFICATION; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; MOLECULAR GENETICS; PHYLOGENY; PLANT DISEASE; WALNUT;

ASCOMYCOTA; FUNGAL PROTEINS; JUGLANS; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT DISEASES;

CANADA; ONTARIO [CANADA]; UNITED STATES;

DIAPORTHALES; FUNGI; GNOMONIACEAE; JUGLANDACEAE; JUGLANS; JUGLANS AILANTHIFOLIA; JUGLANS CINEREA; JUGLANS NIGRA; OPHIOGNOMONIA; SIROCOCCUS; SIROCOCCUS CLAVIGIGNENTI-JUGLANDACEARUM;

EID: 78650957202     PISSN: 18786146     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.funbio.2010.10.007     Document Type: Article

References (41)

1. Altchul S.F., Gish W., Miller W., Myers E.W., Lipman D.J. Basic local alignment serach tool. Journal of Molecular Biology 1990, 215:403-410.
2. Anderson R.L., LaMadeleine L.A. The Distribution of Butternut Decline in the Eastern United States, Forest Survey Report 1978, USDA Forest Service, p. 5.
3. Broders K.D., Boland G.J. Development of a molecular diagnostic assay for detection of the butternut canker pathogen Sirococcus clavigignenti-juglandacearum. Plant Disease 2010, 94:952-958.
4. Broders K.D., SanMiguel P.J., Westerman R.P., Woeste K., Boland G.J. Discovering single nucleotide polymorphisms (SNPs) in an uncharacterized fungal genome using EagleView to evaluate 454 sequencing data. Phytopathology 2010, 100:S17.
5. Cannon P.F., Minter D.W. The nomenclatural history and typification of Hypoderma and Lophodermium. Taxon 1983, 32:572-583.
6. Carbone I., Kohn L.M. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 1999, 91:553-556.
7. Castlebury L.A., Rossman A.Y., Jaklitsch W.J., Vasilyeva L.N. A preliminary overview of the Diaporthales based on large subunit nuclear ribosomal DNA sequences. Mycologia 2002, 94:1017-1031.
8. Davis C.N., Myren D.T., Czerwinski E.J. First report of butternut canker in Ontario. Plant Disease 1992, 76:972.
9. Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 1985, 6:227-242.
10. Furnier G.R., Stolz A.M., Mustaphi R.M., Ostry M.E. Genetic evidence that butternut canker was recently introduced into North America. Canadian Journal of Botany 1999, 77:783-785.
11. Green S., Castlebury L.A. Connection of Gnomonia intermedia to Discula betulina and its relationship to other taxa in Gnomoniaceae. Mycological Research 2007, 111:62-69.
12. Halik S., Bergdahl D.R. Potential beetle vectors of Sirococcus clavigignenti-juglandacearum on butternut. Plant Disease 2002, 86:521-527.
13. Harrison K.J., Hurley J.E., Ostry M.E. First report of butternut canker caused by Sirococcus clavigignenti-juglandacearum in New Brunswick, Canada. Plant Disease 1998, 82:1282.
14. Hudson R.R., Kaplan N.L. Statistical properties of the number of recombination events in the history of a sample of DNA sequences. Genetics 1985, 111:147-164.
15. Huelsenbeck J.P., Ronquist F. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 2001, 19:1572-1574.
16. Innes L., Rainville A. Distribution and detection of Sirococcus clavigignenti-juglandacearum in Quebec. Phytoprotection 1996, 77:75-78.
17. Katovich S.A., Ostry M.E. Insects associated with butternut and butternut canker in Minnesota and Wisconsin. The Great Lakes Entomol 1998, 31:97-108.
18. Konrad H., Stauffer C., Kirsits T., Halmschlager E. Phylogeographic variation among isolates of the Sirococcus conigenus P group. Forest Pathology 2007, 37:22-39.
19. Kumar S., Tamura K., Nei M. MEGA3: integrated software for molecular evolutionary analysis and sequence alignment. Briefings in Bioinformatics 2004, 5:150-163.
20. Mejia L.C., Castlebury L.A., Rossman A.Y., Sogonov M.V., White J.F. Phylogenetic placement and taxonomic review of the genus Cryptosporella and its synonyms Ophiovalsa and Winterella (Gnomoniaceae, Diapothales). Mycological Research 2008, 112:23-35.
21. Nair V.M.G., Kostichka C.J., Kuntz J.E. Sirococcus clavigignenti-juglandacearum: an undescribed species causing canker on butternut. Mycologia 1979, 71:641-646.
22. Neilson C., Cherry M., Boysen B., Hopkin A., McLaughlin J., Beardmore T. COSEWIC Status Report on the Butternut Juglans cinerea in Canada in COSEWIC Assessment and Status Report on the Butternut Juglans cinerea in Canada 2003, Committee on the Status of Endangered Wildlife in Canada, Ottawa, pp. 1-32.
23. Odonnell K., Cigelnik E. Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Molecular Phylogenetics and Evolution 1997, 7:103-116.
24. Ostry M.E. Sirococcus clavigignenti-juglandacearum on heartnut (Juglans ailantifolia var. cordiformis). Plant Disease 1997, 81:1461.
25. Ostry M.E., Katovich S., Anderson R.L. First report of Sirococcus clavigignenti-juglandacearum on black walnut. Plant Disease 1997, 81:830.
26. Ostry M.E., Moore M. Natural and experimental host range of Sirococcus clavigignenti-juglandacearum. Plant Disease 2007, 91:581-584.
27. Paulus B., Gadek P., Hyde K. Successional patterns of microfungi in fallen leaves of Ficus pleurocarpa (Moraceae) in an Australian tropical rain forest. Biotropica 2006, 38:42-51.
28. Price E.W., Carbone I. SNAP: workbench management tool for evolutionary population genetic analysis. Bioinformatics 2005, 21:402-404.
29. Rehner S, 2001. Primers for Elongation Factor 1-a (EF1-a). Available from: http://ocid.nacse.org/research/deephyphae/EF1primer.pdf.
30. Renlund D.W. Forest Pest Conditions in Wisconsin, Ann. Rep. 1971, Wisconsin Department of Natural Resources, Madison WI, 53 p.
31. Rossman A.Y. Holomorphic hypocrealean fungi: Nectria sensu stricto and teleomorphs of Fusarium. The Fungal Holomorph: Mitotic, Meiotic, and Leomorphic Speciation in Fungal Systematics 1993, 149-166. CAB International, Wallingford. D.R. Reynolds, J.W. Taylor (Eds.).
32. Rossman A.Y., Castlebury L.A., Farr D.F., Stanosz G.R. Sirococcus conigenus, Sirococcus peceicola sp. nov. and Sirococcus tsugae sp. nov. on conifers: anamorphic fungi in the Gnomoniaceae, Diaporthales. Forest Pathology 2008, 38:47-60.
33. Rossman A.Y., Palm-Hernandez M.E. Systematics of plant pathogenic fungi: why it matters. Plant Disease 2009, 92:1376-1386.
34. Rozas J.C., S.-D.J., Messenguer X., Rozas R. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 2003, 19:2496-2497.
35. Sogonov M.V., Castlebury L.A., Y.R.A., Meija L.C., White J.F. Leaf-inhabiting genera of the Gnomoniaceae, Diapothathales. Studies in Mycology 2008, 62:1-79.
36. Sutton B.C. The Coelomycetes. Fungi Imperfecti with Pycnidia, Acervuli, and Stromata 1980, Commonweatlh Mycological Institute, Kew, Surrey, UK.
37. Tisserat N., Kuntz J.E. Dispersal gradients of conidia of the butternut canker fungus in a forest during rain. Canadian Journal of Forest Research 1983, 13:1139-1144.
38. Tisserat N., Kuntz J.E. Butternut canker: development on individual trees and increase within a plantation. Plant Disease 1984, 68:613-616.
39. White T.J., Bruns T., Lee S., Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR Protocols: A Guide to Methods and Applications 1990, 315-322. Academic Press, New York. M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.).
40. Wilson D., Barr M.E., Faeth S.H. Ecology and description of a new species of Ophiognomonia endophytic in the leaves of Quercus emoryi. Mycologia 1997, 89:537-546.
41. Zhang N., Blackwell M. Molecular phylogeny of dogwood anthracnose fungus (Discula destructiva) and the Diaporthales. Mycologia 2001, 93:355-365.