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Volumn 10, Issue 3, 2010, Pages 124-131

Differences between predicted cytotoxic T-Lymphocyte Epitopes of 2009 H1N1 Swine-Origin Influenza Virus compared with other H1N1 strains of 1918, 1934 and 2007 for HLA-A*0201, HLAA* 1101, and HLA-A*2402 alleles: Clinical implications

Author keywords

2009 H1N1 swine origin influenza virus; Cytotoxic T lymphocyte epitopes; Epitope prediction servers; H1N1 influenza strains; HLA alleles

Indexed keywords

EPITOPE; HEMAGGLUTININ; HLA A ANTIGEN; INFLUENZA VACCINE; SIALIDASE; VIRUS PROTEIN;

EID: 78650832199     PISSN: 09738363     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (2)

References (45)
  • 1
    • 33846060241 scopus 로고    scopus 로고
    • Ab and T cell epitopes of influenza A virus, knowledge and opportunities
    • Bui HH, Peters B, et al. (2007) Ab and T cell epitopes of influenza A virus, knowledge and opportunities. Proc. Natl. Acad. Sci. USA, 104: 246-251.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 246-251
    • Bui, H.H.1    Peters, B.2
  • 2
    • 48249093112 scopus 로고    scopus 로고
    • To kill a mocking bird flu?
    • Chow VT, Tambyah PA, et al. (2008) To kill a mocking bird flu? Ann. Acad. Med., 37: 451-453.
    • (2008) Ann. Acad. Med. , vol.37 , pp. 451-453
    • Chow, V.T.1    Tambyah, P.A.2
  • 3
    • 67449110743 scopus 로고    scopus 로고
    • Novel Swine-Origin Influenza A (H1N1) Emergence of a novel swine-origin influenza A (H1N1) virus in humans
    • Dawood FS, Jain S, et al. (2009) Novel Swine-Origin Influenza A (H1N1) Emergence of a novel swine-origin influenza A (H1N1) virus in humans. N. Engl. J. Med., 360: 2605-2615.
    • (2009) N. Engl. J. Med. , vol.360 , pp. 2605-2615
    • Dawood, F.S.1    Jain, S.2
  • 4
    • 66149106683 scopus 로고    scopus 로고
    • Serum cross-reactive antibody response to a novel influenza A (H1N1) virus after vaccination with seasonal influenza vaccine
    • CDC
    • CDC (2009) Serum cross-reactive antibody response to a novel influenza A (H1N1) virus after vaccination with seasonal influenza vaccine. MMWR Morb. Mortal Wkly Rep., 58: 521-524.
    • (2009) MMWR Morb. Mortal Wkly Rep. , vol.58 , pp. 521-524
  • 5
    • 77950904361 scopus 로고    scopus 로고
    • 2009 influenza A(H1N1) seroconversion rates and risk factors among distinct adult cohorts in Singapore
    • Chen MI, Lee VJ, et al. (2010) 2009 influenza A(H1N1) seroconversion rates and risk factors among distinct adult cohorts in Singapore. JAMA, 303: 1383-1391.
    • (2010) JAMA , vol.303 , pp. 1383-1391
    • Chen, M.I.1    Lee, V.J.2
  • 6
    • 68849100983 scopus 로고    scopus 로고
    • Severe respiratory disease concurrent with the circulation of H1N1 influenza
    • Chowell G, Bertozzi SM, et al. (2009) Severe respiratory disease concurrent with the circulation of H1N1 influenza. N. Engl. J. Med., 361: 674-679.
    • (2009) N. Engl. J. Med. , vol.361 , pp. 674-679
    • Chowell, G.1    Bertozzi, S.M.2
  • 7
    • 51649126684 scopus 로고    scopus 로고
    • Seasonal inactivated influenza virus vaccines
    • Couch RB (2008) Seasonal inactivated influenza virus vaccines. Vaccine, 26(S4): D5-D9.
    • (2008) Vaccine , vol.26 , Issue.S4
    • Couch, R.B.1
  • 8
    • 77952352890 scopus 로고    scopus 로고
    • Outbreak of pandemic influenza A (H1N1-2009) in Singapore, May to September 2009
    • Cutter J, Ang LW, et al. (2010) Outbreak of pandemic influenza A (H1N1-2009) in Singapore, May to September 2009. Ann. Acad. Med., 39: 273-282.
    • (2010) Ann. Acad. Med. , vol.39 , pp. 273-282
    • Cutter, J.1    Ang, L.W.2
  • 9
    • 19444368726 scopus 로고    scopus 로고
    • Universal influenza A vaccine: Optimization of M2-based constructs
    • De Filette M, Jou WM, et al. (2005) Universal influenza A vaccine: optimization of M2-based constructs. Virology, 337: 149-161.
    • (2005) Virology , vol.337 , pp. 149-161
    • De Filette, M.1    Jou, W.M.2
  • 10
    • 45549108140 scopus 로고    scopus 로고
    • An influenza A vaccine based on tetrameric ectodomain of matrix protein 2
    • De Filette M, Martens W, et al. (2008) An influenza A vaccine based on tetrameric ectodomain of matrix protein 2. J. Biol. Chem., 283: 11382-11387.
    • (2008) J. Biol. Chem. , vol.283 , pp. 11382-11387
    • De Filette, M.1    Martens, W.2
  • 11
    • 69749108374 scopus 로고    scopus 로고
    • Immunoinformatic comparison of T-cell epitopes contained in novel swine-origin influenza A (H1N1) virus with epitopes in 2008-2009 conventional influenza vaccine
    • De Groot AS, Ardito M, et al. (2009) Immunoinformatic comparison of T-cell epitopes contained in novel swine-origin influenza A (H1N1) virus with epitopes in 2008-2009 conventional influenza vaccine. Vaccine, 27: 5740-5747.
    • (2009) Vaccine , vol.27 , pp. 5740-5747
    • De Groot, A.S.1    Ardito, M.2
  • 12
    • 0035989334 scopus 로고    scopus 로고
    • Immuno-informatics: Mining genomes for vaccine components
    • De Groot AS, Sbai H, et al. (2002) Immuno-informatics: mining genomes for vaccine components. Immunol. Cell Biol., 80: 255-269.
    • (2002) Immunol. Cell Biol. , vol.80 , pp. 255-269
    • De Groot, A.S.1    Sbai, H.2
  • 13
    • 55849129637 scopus 로고    scopus 로고
    • Toward a broadly protective influenza vaccine
    • Doherty PC and Kelso A (2008) Toward a broadly protective influenza vaccine. J. Clin. Invest., 118: 3273-3275.
    • (2008) J. Clin. Invest. , vol.118 , pp. 3273-3275
    • Doherty, P.C.1    Kelso, A.2
  • 14
    • 59649090229 scopus 로고    scopus 로고
    • Comparative immunogenicity evaluations of influenza A virus M2 peptide as recombinant virus like particle or conjugate vaccines in mice and monkeys
    • Fu TM, Grimm KM, et al. (2008) Comparative immunogenicity evaluations of influenza A virus M2 peptide as recombinant virus like particle or conjugate vaccines in mice and monkeys. Vaccine, 27: 1440-1447.
    • (2008) Vaccine , vol.27 , pp. 1440-1447
    • Fu, T.M.1    Grimm, K.M.2
  • 15
    • 40349113426 scopus 로고    scopus 로고
    • Interaction of polymerase subunit PB2 and NP with importin alpha1 is a determinant of host range of influenza A virus
    • Gabriel G, Herwig A, et al. (2008) Interaction of polymerase subunit PB2 and NP with importin alpha1 is a determinant of host range of influenza A virus. PLoS Pathog., 4: e11.
    • (2008) PLoS Pathog. , vol.4
    • Gabriel, G.1    Herwig, A.2
  • 16
    • 77949377449 scopus 로고    scopus 로고
    • Assessment of seasonal influenza A virusspecific CD4 T-cell responses to 2009 pandemic H1N1 swine-origin influenza A virus
    • Ge X, Tan V, et al. (2010) Assessment of seasonal influenza A virusspecific CD4 T-cell responses to 2009 pandemic H1N1 swine-origin influenza A virus. J. Virol., 84: 3312-3319.
    • (2010) J. Virol. , vol.84 , pp. 3312-3319
    • Ge, X.1    Tan, V.2
  • 17
    • 0023256436 scopus 로고
    • Cytotoxic T lymphocytes recognize a fragment of influenza virus matrix protein in association with HLA-A2
    • Gotch F, Rothbard J, et al. (1987) Cytotoxic T lymphocytes recognize a fragment of influenza virus matrix protein in association with HLA-A2. Nature, 326: 881-882.
    • (1987) Nature , vol.326 , pp. 881-882
    • Gotch, F.1    Rothbard, J.2
  • 18
    • 65249148471 scopus 로고    scopus 로고
    • Heterosubtypic T-cell responses against avian influenza H5 haemagglutinin are frequently detected in individuals vaccinated against or previously infected with human subtypes of influenza
    • Goy K, Von Bibra S, et al. (2008) Heterosubtypic T-cell responses against avian influenza H5 haemagglutinin are frequently detected in individuals vaccinated against or previously infected with human subtypes of influenza. Influenza Other Respi. Viruses, 2: 115-125.
    • (2008) Influenza Other Respi. Viruses , vol.2 , pp. 115-125
    • Goy, K.1    Von Bibra, S.2
  • 19
    • 53649096656 scopus 로고    scopus 로고
    • Heterosubtypic immunity to influenza A virus: Where do we stand?
    • Grebe KM, Yewdell JW, et al. (2008) Heterosubtypic immunity to influenza A virus: where do we stand? Microbes Infect., 10: 1024- 1029.
    • (2008) Microbes Infect. , vol.10 , pp. 1024-1029
    • Grebe, K.M.1    Yewdell, J.W.2
  • 20
    • 72449172862 scopus 로고    scopus 로고
    • Response after one dose of a monovalent influenza A (H1N1) 2009 vaccine - preliminary report
    • Greenberg ME, Lai MH, et al. (2009) Response after one dose of a monovalent influenza A (H1N1) 2009 vaccine - preliminary report. N. Engl. J. Med., 361: 2405-2413.
    • (2009) N. Engl. J. Med. , vol.361 , pp. 2405-2413
    • Greenberg, M.E.1    Lai, M.H.2
  • 21
    • 70349873173 scopus 로고    scopus 로고
    • Cross-reactive antibody responses to the 2009 pandemic H1N1 influenza virus
    • Hancock K, Veguilla V, et al. (2009) Cross-reactive antibody responses to the 2009 pandemic H1N1 influenza virus. N. Engl. J. Med., 361: 1945-1952.
    • (2009) N. Engl. J. Med. , vol.361 , pp. 1945-1952
    • Hancock, K.1    Veguilla, V.2
  • 22
    • 34447258592 scopus 로고    scopus 로고
    • The chemical and dynamical influence of the anti-viral drug amantadine on the M2 proton channel transmembrane domain
    • Hu J, Fu R, et al. (2007) The chemical and dynamical influence of the anti-viral drug amantadine on the M2 proton channel transmembrane domain. Biophys. J., 93: 276-283.
    • (2007) Biophys. J. , vol.93 , pp. 276-283
    • Hu, J.1    Fu, R.2
  • 23
    • 43949096181 scopus 로고    scopus 로고
    • Cross-recognition of avian H5N1 influenza virus by human cytotoxic T-lymphocyte populations directed to human influenza A virus
    • Kreijtz JH, de Mutsert G, et al. (2008) Cross-recognition of avian H5N1 influenza virus by human cytotoxic T-lymphocyte populations directed to human influenza A virus. J. Virol., 82: 5161-5166.
    • (2008) J. Virol. , vol.82 , pp. 5161-5166
    • Kreijtz, J.H.1    de Mutsert, G.2
  • 24
    • 55849125109 scopus 로고    scopus 로고
    • Memory T cells established by seasonal human influenza A infection cross-react with avian influenza A (H5N1) in healthy individuals
    • Lee LYH, Ha DLA, et al. (2008) Rowland-Jones S, Dong Tao. Memory T cells established by seasonal human influenza A infection cross-react with avian influenza A (H5N1) in healthy individuals. J. Clin. Invest., 118: 3478-3490.
    • (2008) J. Clin. Invest. , vol.118 , pp. 3478-3490
    • Lee, L.Y.H.1    Ha, D.L.A.2    Rowland-Jones, S.3    Tao, D.4
  • 25
    • 70349614357 scopus 로고    scopus 로고
    • Economic analysis of pandemic influenza vaccination strategies in Singapore
    • Lee VJ, Tok MY, et al. (2009) Economic analysis of pandemic influenza vaccination strategies in Singapore. PLoS One, 4: e7108.
    • (2009) PLoS One , vol.4
    • Lee, V.J.1    Tok, M.Y.2
  • 26
    • 42549105195 scopus 로고    scopus 로고
    • Evaluation of MHC class I peptide binding prediction servers: Applications for vaccine research
    • Lin HH, Ray S, et al. (2008) Evaluation of MHC class I peptide binding prediction servers: applications for vaccine research. BMC Immunol., 9: 8.
    • (2008) BMC Immunol. , vol.9 , pp. 8
    • Lin, H.H.1    Ray, S.2
  • 27
    • 0033695775 scopus 로고    scopus 로고
    • Analysis of the distribution of HLA-A alleles in populations from five continents
    • Middleton D, Williams F, et al. (2000) Analysis of the distribution of HLA-A alleles in populations from five continents. Hum. Immunol., 61: 1048-1052.
    • (2000) Hum. Immunol. , vol.61 , pp. 1048-1052
    • Middleton, D.1    Williams, F.2
  • 28
    • 0037853316 scopus 로고    scopus 로고
    • New alleles frequency database
    • Middleton D, Menchaca L, et al. (2003) New alleles frequency database: http://www.allelefrequencies.net. Tissue Antigens, 61: 403- 407.
    • (2003) Tissue Antigens , vol.61 , pp. 403-407
    • Middleton, D.1    Menchaca, L.2
  • 29
    • 67650892251 scopus 로고    scopus 로고
    • The persistent legacy of the 1918 influenza virus
    • Morens DM, Taubenberger JK, et al. (2009) The persistent legacy of the 1918 influenza virus. N. Engl. J. Med., 361: 225-229.
    • (2009) N. Engl. J. Med. , vol.361 , pp. 225-229
    • Morens, D.M.1    Taubenberger, J.K.2
  • 30
    • 58349121196 scopus 로고    scopus 로고
    • Adaptation of human influenza H3N2 virus in a mouse pneumonitis model: Insights into viral virulence, tissue tropism and host pathogenesis
    • Narasaraju T, Sim MK, et al. (2009) Adaptation of human influenza H3N2 virus in a mouse pneumonitis model: insights into viral virulence, tissue tropism and host pathogenesis. Microbes Infect., 11: 2-11.
    • (2009) Microbes Infect. , vol.11 , pp. 2-11
    • Narasaraju, T.1    Sim, M.K.2
  • 31
    • 77649205430 scopus 로고    scopus 로고
    • Contributions of the avian influenza virus HA, NA, and M2 surface proteins to the induction of neutralizing antibodies and protective immunity
    • Nayak B, Kumar S, et al. (2010) Contributions of the avian influenza virus HA, NA, and M2 surface proteins to the induction of neutralizing antibodies and protective immunity. J. Virol., 84: 2408- 2420.
    • (2010) J. Virol. , vol.84 , pp. 2408-2420
    • Nayak, B.1    Kumar, S.2
  • 32
    • 0842326027 scopus 로고    scopus 로고
    • Generation of high-yielding influenza A viruses in African green monkey kidney (Vero) cells by reverse genetics
    • Ozaki H, Govorkova EA, et al. (2004) Generation of high-yielding influenza A viruses in African green monkey kidney (Vero) cells by reverse genetics. J. Virol., 78: 1851-1857.
    • (2004) J. Virol. , vol.78 , pp. 1851-1857
    • Ozaki, H.1    Govorkova, E.A.2
  • 33
    • 0023055775 scopus 로고
    • New hydrophilicity scale derived from high-performance liquid chromatography peptide retention data: Correlation of predicted surface residues with antigenicity and x-rayderived accessible sites
    • Parker JMR, Guo D, et al. (1986) New hydrophilicity scale derived from high-performance liquid chromatography peptide retention data: correlation of predicted surface residues with antigenicity and x-rayderived accessible sites. Biochemistry, 25: 5425-5432.
    • (1986) Biochemistry , vol.25 , pp. 5425-5432
    • Parker, J.M.R.1    Guo, D.2
  • 34
    • 67649945748 scopus 로고    scopus 로고
    • Characterization of cytotoxic Tlymphocyte epitopes and immune responses to SARS coronavirus spike DNA vaccine expressing the RGD-integrin-binding motif
    • Poh WP, Narasaraju T, et al. (2009) Characterization of cytotoxic Tlymphocyte epitopes and immune responses to SARS coronavirus spike DNA vaccine expressing the RGD-integrin-binding motif. J. Med. Virol., 81: 1131-1139.
    • (2009) J. Med. Virol. , vol.81 , pp. 1131-1139
    • Poh, W.P.1    Narasaraju, T.2
  • 35
    • 0033388725 scopus 로고    scopus 로고
    • SYFPEITHI: Database for MHC ligands and peptide motifs
    • Rammensee HG, Bachmann J, et al. (1999) SYFPEITHI: database for MHC ligands and peptide motifs. Immunogenetics, 50: 213-219.
    • (1999) Immunogenetics , vol.50 , pp. 213-219
    • Rammensee, H.G.1    Bachmann, J.2
  • 36
    • 0036727207 scopus 로고    scopus 로고
    • Prediction of MHC class I binding peptides using profile motifs
    • Reche PA, Glutting JP, et al. (2002) Prediction of MHC class I binding peptides using profile motifs. Hum. Immunol., 63: 701-709.
    • (2002) Hum. Immunol. , vol.63 , pp. 701-709
    • Reche, P.A.1    Glutting, J.P.2
  • 37
    • 70350767270 scopus 로고    scopus 로고
    • Human genomic diversity, viral genomics and proteomics, as exemplified by human papillomaviruses and H5N1 influenza viruses
    • Sakharkar MK, Sakharkar KR, et al. (2009) Human genomic diversity, viral genomics and proteomics, as exemplified by human papillomaviruses and H5N1 influenza viruses. Hum. Genomics, 3: 320-331.
    • (2009) Hum. Genomics , vol.3 , pp. 320-331
    • Sakharkar, M.K.1    Sakharkar, K.R.2
  • 38
    • 67449152290 scopus 로고    scopus 로고
    • Triple-reassortant swine influenza A (H1) in humans in the United States, 2005-2009
    • Shinde V, Bridges CB, et al. (2009) Triple-reassortant swine influenza A (H1) in humans in the United States, 2005-2009. N. Engl. J. Med., 360: 2616-2625.
    • (2009) N. Engl. J. Med. , vol.360 , pp. 2616-2625
    • Shinde, V.1    Bridges, C.B.2
  • 39
    • 0037606124 scopus 로고    scopus 로고
    • ProPred1: Prediction of promiscuous MHC class-I binding sites
    • Singh H and Raghava GPS (2003) ProPred1: prediction of promiscuous MHC class-I binding sites. Bioinformatics, 19: 1009- 1014.
    • (2003) Bioinformatics , vol.19 , pp. 1009-1014
    • Singh, H.1    Raghava, G.P.S.2
  • 40
    • 67149113482 scopus 로고    scopus 로고
    • Extrapolating from sequence - the 2009 H1N1 'swine' influenza virus
    • Soundararajan V, Tharakaraman K, et al. (2009) Extrapolating from sequence - the 2009 H1N1 'swine' influenza virus. Nat. Biotechnol., 27: 510-513.
    • (2009) Nat. Biotechnol. , vol.27 , pp. 510-513
    • Soundararajan, V.1    Tharakaraman, K.2
  • 41
    • 77952324581 scopus 로고    scopus 로고
    • An epidemiological study of 1348 cases of pandemic H1N1 influenza admitted to Singapore Hospitals from July to September 2009
    • Subramony H, Lai FY, et al. (2010) An epidemiological study of 1348 cases of pandemic H1N1 influenza admitted to Singapore Hospitals from July to September 2009. Ann. Acad. Med., 39: 283- 290.
    • (2010) Ann. Acad. Med. , vol.39 , pp. 283-290
    • Subramony, H.1    Lai, F.Y.2
  • 42
    • 66349127784 scopus 로고    scopus 로고
    • Viruses selectively mutate their CD8+ T-cell epitopes - a large-scale immunomic analysis
    • Vider-Shalit A, Sarid R, et al. (2009) Viruses selectively mutate their CD8+ T-cell epitopes - a large-scale immunomic analysis. Bioinformatics, 25: 39-44.
    • (2009) Bioinformatics , vol.25 , pp. 39-44
    • Vider-Shalit, A.1    Sarid, R.2
  • 43
    • 36749090029 scopus 로고    scopus 로고
    • Characterization of immunity induced by M2e of influenza virus
    • Wu F, Huang JH, et al. (2007) Characterization of immunity induced by M2e of influenza virus. Vaccine, 25: 8868-8873.
    • (2007) Vaccine , vol.25 , pp. 8868-8873
    • Wu, F.1    Huang, J.H.2
  • 44
    • 70350452964 scopus 로고    scopus 로고
    • Preexisting immunity to pandemic (H1N1) 2009
    • Xing Z and Cardona CJ (2009) Preexisting immunity to pandemic (H1N1) 2009. Emerg. Infect. Dis., 15: 1847-1849.
    • (2009) Emerg. Infect. Dis. , vol.15 , pp. 1847-1849
    • Xing, Z.1    Cardona, C.J.2
  • 45
    • 52949141601 scopus 로고    scopus 로고
    • MHC-peptide binding prediction for epitope based vaccine design
    • Zhao B, Sakharkar KR, et al. (2007) MHC-peptide binding prediction for epitope based vaccine design. Int. J. Integ, Biol., 1: 127-140.
    • (2007) Int. J. Integ, Biol. , vol.1 , pp. 127-140
    • Zhao, B.1    Sakharkar, K.R.2


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