메뉴 건너뛰기




Volumn 107, Issue 51, 2010, Pages 22184-22189

Epigenetic reprogramming during vegetative phase change in maize

Author keywords

Epigenetics; Methylation; MuDR; Mutator

Indexed keywords

ARTICLE; CONTROLLED STUDY; EPIGENETICS; GENE EXPRESSION; GENE SILENCING; MAIZE; NONHUMAN; PLANT GENETICS; PRIORITY JOURNAL; TRANSPOSON; VEGETATIVE STAGE;

EID: 78650637906     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1016884108     Document Type: Article
Times cited : (65)

References (50)
  • 1
    • 66449124318 scopus 로고    scopus 로고
    • Epigenetic regulation of transposable elements in plants
    • Lisch D (2009) Epigenetic regulation of transposable elements in plants. Annu Rev Plant Biol 60:43-66.
    • (2009) Annu Rev Plant Biol , vol.60 , pp. 43-66
    • Lisch, D.1
  • 2
    • 33947303168 scopus 로고    scopus 로고
    • Transposable elements and the epigenetic regulation of the genome
    • Slotkin RK, Martienssen R (2007) Transposable elements and the epigenetic regulation of the genome. Nat Rev Genet 8:272-285.
    • (2007) Nat Rev Genet , vol.8 , pp. 272-285
    • Slotkin, R.K.1    Martienssen, R.2
  • 3
    • 77954381767 scopus 로고    scopus 로고
    • Small RNAs in the animal gonad: Guarding genomes and guiding development
    • Lau NC (2010) Small RNAs in the animal gonad: Guarding genomes and guiding development. Int J Biochem Cell Biol 42:1334-1347.
    • (2010) Int J Biochem Cell Biol , vol.42 , pp. 1334-1347
    • Lau, N.C.1
  • 4
    • 77950518292 scopus 로고    scopus 로고
    • SiRNAs and DNA methylation: Seedy epigenetics
    • Mosher RA, Melnyk CW (2010) SiRNAs and DNA methylation: Seedy epigenetics. Trends Plant Sci 15:4204-4210.
    • (2010) Trends Plant Sci , vol.15 , pp. 4204-4210
    • Mosher, R.A.1    Melnyk, C.W.2
  • 5
    • 36749037521 scopus 로고    scopus 로고
    • The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race
    • Aravin AA, Hannon GJ, Brennecke J (2007) The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race. Science 318:761-764.
    • (2007) Science , vol.318 , pp. 761-764
    • Aravin, A.A.1    Hannon, G.J.2    Brennecke, J.3
  • 6
    • 0028978150 scopus 로고
    • Genetic characterization of the Mutator system in maize: Behavior and regulation of Mu elements in a minimal line
    • Lisch D, Chomet P, Freeling M (1995) Genetic characterization of the Mutator system in maize: Behavior and regulation of Mu elements in a minimal line. Genetics 139:1777-1796.
    • (1995) Genetics , vol.139 , pp. 1777-1796
    • Lisch, D.1    Chomet, P.2    Freeling, M.3
  • 7
    • 0038069053 scopus 로고    scopus 로고
    • Unique features of the plant life cycle and their consequences
    • Walbot V, Evans MMS (2003) Unique features of the plant life cycle and their consequences. Nat Rev Genet 4:369-379.
    • (2003) Nat Rev Genet , vol.4 , pp. 369-379
    • Walbot, V.1    Evans, M.M.S.2
  • 8
    • 0242349693 scopus 로고    scopus 로고
    • Mu killer causes the heritable inactivation of the Mutator family of transposable elements in Zea mays
    • Slotkin RK, Freeling M, Lisch D (2003) Mu killer causes the heritable inactivation of the Mutator family of transposable elements in Zea mays. Genetics 165:781-797.
    • (2003) Genetics , vol.165 , pp. 781-797
    • Slotkin, R.K.1    Freeling, M.2    Lisch, D.3
  • 9
    • 0036833565 scopus 로고    scopus 로고
    • Mutator transposons
    • Lisch D (2002) Mutator transposons. Trends Plant Sci 7:498-504.
    • (2002) Trends Plant Sci , vol.7 , pp. 498-504
    • Lisch, D.1
  • 10
    • 20044378849 scopus 로고    scopus 로고
    • Heritable transposon silencing initiated by a naturally occurring transposon inverted duplication
    • Slotkin RK, Freeling M, Lisch D (2005) Heritable transposon silencing initiated by a naturally occurring transposon inverted duplication. Nat Genet 37:641-644.
    • (2005) Nat Genet , vol.37 , pp. 641-644
    • Slotkin, R.K.1    Freeling, M.2    Lisch, D.3
  • 11
    • 34848903233 scopus 로고    scopus 로고
    • Role of histone and DNA methylation in gene regulation
    • Vaillant I, Paszkowski J (2007) Role of histone and DNA methylation in gene regulation. Curr Opin Plant Biol 10:528-533.
    • (2007) Curr Opin Plant Biol , vol.10 , pp. 528-533
    • Vaillant, I.1    Paszkowski, J.2
  • 12
    • 77249170184 scopus 로고    scopus 로고
    • Establishing, maintaining and modifying DNA methylation patterns in plants and animals
    • Law JA, Jacobsen SE (2010) Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet 11:204-220.
    • (2010) Nat Rev Genet , vol.11 , pp. 204-220
    • Law, J.A.1    Jacobsen, S.E.2
  • 13
    • 0028297168 scopus 로고
    • Coordinate suppression of mutations caused by Robertson's mutator transposons in maize
    • Martienssen R, Baron A (1994) Coordinate suppression of mutations caused by Robertson's mutator transposons in maize. Genetics 136:1157-1170.
    • (1994) Genetics , vol.136 , pp. 1157-1170
    • Martienssen, R.1    Baron, A.2
  • 14
    • 0001428923 scopus 로고    scopus 로고
    • Heteroblastic features of leaf anatomy in maize and their genetic regulation
    • Bongard-Pierce DK, Evans MMS, Poethig RS (1996) Heteroblastic features of leaf anatomy in maize and their genetic regulation. Int J Plant Sci 157:331-340.
    • (1996) Int J Plant Sci , vol.157 , pp. 331-340
    • Bongard-Pierce, D.K.1    Evans, M.M.S.2    Poethig, R.S.3
  • 15
    • 4243085624 scopus 로고    scopus 로고
    • Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification
    • Lippman Z, May B, Yordan C, Singer T, Martienssen R (2003) Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification. PLoS Biol 1:E67.
    • (2003) PLoS Biol , vol.1
    • Lippman, Z.1    May, B.2    Yordan, C.3    Singer, T.4    Martienssen, R.5
  • 16
    • 34247630796 scopus 로고    scopus 로고
    • SDG714, a histone H3K9 methyltransferase, is involved in Tos17 DNA methylation and transposition in rice
    • Ding Y, et al. (2007) SDG714, a histone H3K9 methyltransferase, is involved in Tos17 DNA methylation and transposition in rice. Plant Cell 19:9-22.
    • (2007) Plant Cell , vol.19 , pp. 9-22
    • Ding, Y.1
  • 17
    • 23844494476 scopus 로고    scopus 로고
    • Distinct regulation of histone H3 methylation at lysines 27 and 9 by CpG methylation in Arabidopsis
    • Mathieu O, Probst AV, Paszkowski J (2005) Distinct regulation of histone H3 methylation at lysines 27 and 9 by CpG methylation in Arabidopsis. EMBO J 24:2783-2791.
    • (2005) EMBO J , vol.24 , pp. 2783-2791
    • Mathieu, O.1    Probst, A.V.2    Paszkowski, J.3
  • 18
    • 33646051212 scopus 로고    scopus 로고
    • Systemic antiviral silencing in plants
    • Xie Q, Guo HS (2006) Systemic antiviral silencing in plants. Virus Res 118:1-6.
    • (2006) Virus Res , vol.118 , pp. 1-6
    • Xie, Q.1    Guo, H.S.2
  • 19
    • 19344374219 scopus 로고    scopus 로고
    • Genetic and functional diversification of small RNA pathways in plants
    • Xie Z, et al. (2004) Genetic and functional diversification of small RNA pathways in plants. PLoS Biol 2:E104.
    • (2004) PLoS Biol , vol.2
    • Xie, Z.1
  • 20
    • 33750244877 scopus 로고    scopus 로고
    • Initiation, establishment, and maintenance ofheritable MuDR transposon silencing in maize are mediated by distinct factors
    • Woodhouse MR, Freeling M, Lisch D (2006) Initiation, establishment, and maintenance ofheritable MuDR transposon silencing in maize are mediated by distinct factors. PLoS Biol 4:e339.
    • (2006) PLoS Biol , vol.4
    • Woodhouse, M.R.1    Freeling, M.2    Lisch, D.3
  • 21
    • 33645528966 scopus 로고    scopus 로고
    • Post-transcriptional small RNA pathways in plants: Mechanisms and regulations
    • Vaucheret H (2006) Post-transcriptional small RNA pathways in plants: Mechanisms and regulations. Genes Dev 20:759-771.
    • (2006) Genes Dev , vol.20 , pp. 759-771
    • Vaucheret, H.1
  • 22
    • 0034716907 scopus 로고    scopus 로고
    • Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance
    • Mourrain P, et al. (2000) Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance. Cell 101:533-542.
    • (2000) Cell , vol.101 , pp. 533-542
    • Mourrain, P.1
  • 23
    • 62049085784 scopus 로고    scopus 로고
    • DsRNA with 5' overhangs contributes to endogenous and antiviral RNA silencing pathways in plants
    • Fukunaga R, Doudna JA (2009) dsRNA with 5' overhangs contributes to endogenous and antiviral RNA silencing pathways in plants. EMBO J 28:545-555.
    • (2009) EMBO J , vol.28 , pp. 545-555
    • Fukunaga, R.1    Doudna, J.A.2
  • 25
    • 4644286235 scopus 로고    scopus 로고
    • SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis
    • Peragine A, Yoshikawa M, Wu G, Albrecht HL, Poethig RS (2004) SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis. Genes Dev 18:2368-2379.
    • (2004) Genes Dev , vol.18 , pp. 2368-2379
    • Peragine, A.1    Yoshikawa, M.2    Wu, G.3    Albrecht, H.L.4    Poethig, R.S.5
  • 27
    • 63449136489 scopus 로고    scopus 로고
    • Temporal and spatial downregulation of Arabidopsis MET1 activity results in global DNA hypomethylation and developmental defects
    • Kim M, et al. (2008) Temporal and spatial downregulation of Arabidopsis MET1 activity results in global DNA hypomethylation and developmental defects. Mol Cells 26:611-615.
    • (2008) Mol Cells , vol.26 , pp. 611-615
    • Kim, M.1
  • 28
    • 33646191642 scopus 로고    scopus 로고
    • DRB4-dependent TAS3 trans-acting siRNAs control leaf morphology through AGO7
    • Adenot X, et al. (2006) DRB4-dependent TAS3 trans-acting siRNAs control leaf morphology through AGO7. Curr Biol 16:927-932.
    • (2006) Curr Biol , vol.16 , pp. 927-932
    • Adenot, X.1
  • 29
    • 33646165249 scopus 로고    scopus 로고
    • Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis
    • Fahlgren N, et al. (2006) Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis. Curr Biol 16:939-944.
    • (2006) Curr Biol , vol.16 , pp. 939-944
    • Fahlgren, N.1
  • 30
    • 77954400071 scopus 로고    scopus 로고
    • Ragged seedling2 Encodes an ARGONAUTE7-like protein required for mediolateral expansion, but not dorsiventrality, of maize leaves
    • Douglas RN, et al. (2010) ragged seedling2 Encodes an ARGONAUTE7-like protein required for mediolateral expansion, but not dorsiventrality, of maize leaves. Plant Cell 22:1441-1451.
    • (2010) Plant Cell , vol.22 , pp. 1441-1451
    • Douglas, R.N.1
  • 31
    • 33646192268 scopus 로고    scopus 로고
    • Specification of leaf polarity in Arabidopsis via the trans-acting siRNA pathway
    • Garcia D, Collier SA, Byrne ME, Martienssen RA (2006) Specification of leaf polarity in Arabidopsis via the trans-acting siRNA pathway. Curr Biol 16:933-938.
    • (2006) Curr Biol , vol.16 , pp. 933-938
    • Garcia, D.1    Collier, S.A.2    Byrne, M.E.3    Martienssen, R.A.4
  • 32
    • 0024261383 scopus 로고
    • Maize developmental genetics: Genes of morphogenesis
    • Sheridan WF (1988) Maize developmental genetics: Genes of morphogenesis. Annu Rev Genet 22:353-385.
    • (1988) Annu Rev Genet , vol.22 , pp. 353-385
    • Sheridan, W.F.1
  • 33
    • 8944231067 scopus 로고
    • The developmental morphology of the mutant "corn grass"
    • Whaley WG, Leech JH (1950) The developmental morphology of the mutant "corn grass". Bull Torrey Bot Club 77:274-286.
    • (1950) Bull Torrey Bot Club , vol.77 , pp. 274-286
    • Whaley, W.G.1    Leech, J.H.2
  • 34
    • 34047174556 scopus 로고    scopus 로고
    • The heterochronic maize mutant Corngrass1 results from overexpression of a tandem microRNA
    • Chuck G, Cigan AM, Saeteurn K, Hake S (2007) The heterochronic maize mutant Corngrass1 results from overexpression of a tandem microRNA. Nat Genet 39:544-549.
    • (2007) Nat Genet , vol.39 , pp. 544-549
    • Chuck, G.1    Cigan, A.M.2    Saeteurn, K.3    Hake, S.4
  • 35
    • 0001273306 scopus 로고
    • Heterochronic mutations affecting shoot development in maize
    • Poethig RS (1988) Heterochronic mutations affecting shoot development in maize. Genetics 119:959-973.
    • (1988) Genetics , vol.119 , pp. 959-973
    • Poethig, R.S.1
  • 36
    • 33748130065 scopus 로고    scopus 로고
    • Trans-acting siRNA-mediated repression of ETTIN and ARF4 regulates heteroblasty in Arabidopsis
    • Hunter C, et al. (2006) Trans-acting siRNA-mediated repression of ETTIN and ARF4 regulates heteroblasty in Arabidopsis. Development 133:2973-2981.
    • (2006) Development , vol.133 , pp. 2973-2981
    • Hunter, C.1
  • 37
    • 34347342782 scopus 로고    scopus 로고
    • Intra- and intercellular RNA interference in Arabidopsis thaliana requires components of the microRNA and heterochromatic silencing pathways
    • Dunoyer P, Himber C, Ruiz-Ferrer V, Alioua A, Voinnet O (2007) Intra- and intercellular RNA interference in Arabidopsis thaliana requires components of the microRNA and heterochromatic silencing pathways. Nat Genet 39:848-856.
    • (2007) Nat Genet , vol.39 , pp. 848-856
    • Dunoyer, P.1    Himber, C.2    Ruiz-Ferrer, V.3    Alioua, A.4    Voinnet, O.5
  • 38
    • 0025602622 scopus 로고
    • Phase change and the regulation of shoot morphogenesis in plants
    • Poethig RS (1990) Phase change and the regulation of shoot morphogenesis in plants. Science 250:923-930.
    • (1990) Science , vol.250 , pp. 923-930
    • Poethig, R.S.1
  • 39
    • 70349786302 scopus 로고    scopus 로고
    • Epigenetic resetting of a gene imprinted in plant embryos
    • Jahnke S, Scholten S (2009) Epigenetic resetting of a gene imprinted in plant embryos. Curr Biol 19:1677-1681.
    • (2009) Curr Biol , vol.19 , pp. 1677-1681
    • Jahnke, S.1    Scholten, S.2
  • 40
    • 67149086996 scopus 로고    scopus 로고
    • Extensive demethylation of repetitive elements during seed development underlies gene imprinting
    • Gehring M, Bubb KL, Henikoff S (2009) Extensive demethylation of repetitive elements during seed development underlies gene imprinting. Science 324:1447-1451.
    • (2009) Science , vol.324 , pp. 1447-1451
    • Gehring, M.1    Bubb, K.L.2    Henikoff, S.3
  • 41
    • 59349118366 scopus 로고    scopus 로고
    • Epigenetic reprogramming and small RNA silencing of transposable elements in pollen
    • Slotkin RK, et al. (2009) Epigenetic reprogramming and small RNA silencing of transposable elements in pollen. Cell 136:461-472.
    • (2009) Cell , vol.136 , pp. 461-472
    • Slotkin, R.K.1
  • 42
    • 67149119197 scopus 로고    scopus 로고
    • Genome-wide demethylation of Arabidopsis endosperm
    • Hsieh T-F, et al. (2009) Genome-wide demethylation of Arabidopsis endosperm. Science 324:1451-1454.
    • (2009) Science , vol.324 , pp. 1451-1454
    • Hsieh, T.-F.1
  • 43
    • 77950086568 scopus 로고    scopus 로고
    • Control of female gamete formation by a small RNA pathway in Arabidopsis
    • Olmedo-Monfil V, et al. (2010) Control of female gamete formation by a small RNA pathway in Arabidopsis. Nature 464:628-632.
    • (2010) Nature , vol.464 , pp. 628-632
    • Olmedo-Monfil, V.1
  • 44
    • 77952403409 scopus 로고    scopus 로고
    • Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells
    • Molnar A, et al. (2010) Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells. Science 328:872-875.
    • (2010) Science , vol.328 , pp. 872-875
    • Molnar, A.1
  • 45
    • 77952584373 scopus 로고    scopus 로고
    • An endogenous, systemic RNAi pathway in plants
    • Dunoyer P, et al. (2010) An endogenous, systemic RNAi pathway in plants. EMBO J 29:1699-1712.
    • (2010) EMBO J , vol.29 , pp. 1699-1712
    • Dunoyer, P.1
  • 46
    • 0031706570 scopus 로고    scopus 로고
    • Leafbladeless1 is required for dorsoventrality of lateral organs in maize
    • Timmermans MCP, Schultes NP, Jankovsky JP, Nelson T (1998) Leafbladeless1 is required for dorsoventrality of lateral organs in maize. Development 125:2813-2823.
    • (1998) Development , vol.125 , pp. 2813-2823
    • Timmermans, M.C.P.1    Schultes, N.P.2    Jankovsky, J.P.3    Nelson, T.4
  • 47
    • 0037072666 scopus 로고    scopus 로고
    • Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1
    • Gendrel AV, Lippman Z, Yordan C, Colot V, Martienssen RA (2002) Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1. Science 297:1871-1873.
    • (2002) Science , vol.297 , pp. 1871-1873
    • Gendrel, A.V.1    Lippman, Z.2    Yordan, C.3    Colot, V.4    Martienssen, R.A.5
  • 48
    • 36248953882 scopus 로고    scopus 로고
    • Chromatin immunoprecipitation: Optimization, quantitative analysis and data normalization
    • Haring M, et al. (2007) Chromatin immunoprecipitation: Optimization, quantitative analysis and data normalization. Plant Methods 3:11.
    • (2007) Plant Methods , vol.3 , pp. 11
    • Haring, M.1
  • 50
    • 52649126232 scopus 로고    scopus 로고
    • Kismeth: Analyzer of plant methylation states through bisulfite sequencing
    • Gruntman E, et al. (2008) Kismeth: Analyzer of plant methylation states through bisulfite sequencing. BMC Bioinformatics 9:371.
    • (2008) BMC Bioinformatics , vol.9 , pp. 371
    • Gruntman, E.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.