Time-frequency characterization of electrocorticographic recordings of epileptic patients using frequency-entropy similarity: A comparison to other bi-variate measures

Journal of Neuroscience Methods

Volumn 194, Issue 2, 2011, Pages 358-373

  Gazit, T ^a   Doron, I ^b   Sagher, O ^c   Kohrman, M H ^d   Towle, V L ^e   Teicher, M ^a   Ben Jacob, E ^b  

^a BAR ILAN UNIVERSITY   (Israel)

^b TEL AVIV UNIVERSITY   (Israel)

^c UNIVERSITY OF MICHIGAN HEALTH SYSTEM   (United States)

^d UNIVERSITY OF CHICAGO   (United States)

^e UNIVERSITY OF CHICAGO   (United States)

Author keywords

Coherence; Electrocorticography; Entropy; Epilepsy; Wavelet Packets; Wavelets

Indexed keywords

ADOLESCENT; ADULT; ARTICLE; BIVARIATE ANALYSIS; BRAIN MAPPING; CASE REPORT; CHILD; COMPLEX PARTIAL SEIZURE; CONTROLLED STUDY; CORRELATION ANALYSIS; ELECTROCORTICOGRAPHY; ELECTRODE; ENTROPY; EPILEPSY; EPILEPTIC DISCHARGE; FEMALE; GRAND MAL SEIZURE; HIPPOCAMPAL SCLEROSIS; HUMAN; MALE; NEUROPATHOLOGY; NUCLEAR MAGNETIC RESONANCE IMAGING; PRIORITY JOURNAL; RECORDING; SCHOOL CHILD; TEMPORAL LOBECTOMY; TONIC CLONIC SEIZURE; WAVEFORM;

ADOLESCENT; ALGORITHMS; BRAIN; BRAIN MAPPING; CHILD; ELECTROENCEPHALOGRAPHY; ENTROPY; EPILEPSY; FEMALE; HUMANS; MALE; MODELS, NEUROLOGICAL; NONLINEAR DYNAMICS; SIGNAL PROCESSING, COMPUTER-ASSISTED; TIME FACTORS; YOUNG ADULT;

EID: 78650517126     PISSN: 01650270     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jneumeth.2010.10.011     Document Type: Article

References (48)

1. Allefeld C., Bialonski S. Detecting synchronization clusters in multivariate time series via coarse-graining of markov chains. Phys Rev E 2007, 76:066207.
2. Andrzejak R.G., Lehnertz K., Mormann F., Rieke C., David P., Elger C.E. Indications of nonlinear deterministic and finite-dimensional structures in time series of brain electrical activity: dependence on recording region and brain state. Phys Rev E 2001, 64:061907.
3. Ansari-Asl K., Bellanger J.J., Bartolomei F., Wendling F., Senhadji L. Time-frequency characterization of interdependencies in nonstationary signals: application to epileptic EEG. IEEE Trans Biomed Eng 2005, 52(7):1218-1226.
4. Ball T., Kern M., Mutschler I., Aertsen A., Schulze-Bonhage A. Signal quality of simultaneously recorded invasive and non-invasive EEG. Neuroimage 2009, 46:708-716.
5. Baruchi I., Ben-Jacob E. Functional holography of recorded neuronal networks activity. J Neuroinformat 2004, 2:333-352.
6. Ben-Jacob E., Boccaletti S., Pomyalov A., Procaccia I., Towle V.L. Detecting and localizing the foci in human epileptic seizures. Chaos 2007, 17:043113.
7. Ben-Jacob E., Doron I., Gazit T., Rephaeli E., Sagher O., Towle V.L. Mapping assessment of epileptogenic foci using frequency-entropy templates. Phys Rev E 2007, 76:051903.
8. Bosko J.T., Todd B.D., Sadus R.J. Analysis of the shape of dendrimers under shear. J Chem Phys 2006, 124(044910):425-434.
9. Cazelles B., Chavez M., Magny G.C., Guegan J.F., Hales S. Time-dependent spectral analysis of epidemiological time-series with wavelets. J R Soc Interface 2007, 4(15):625.
10. Cazelles B., Stone L. Detection of imperfect population synchrony in an uncertain world. J Anim Ecol 2003, 72:953-968.
11. Chavez M., Besserve M., Adam C., Martinerie J. Towards a proper estimation of phase synchronization from time series. J Neurosci Methods 2006, 154(1-2):149-160.
12. Coifman R.R., Wickerhauser M.V. Entropy-based algorithms for best basis selection. IEEE Trans Inf Theor 1992, 38(2):713-718.
13. Doron I., Hulata E., Baruchi I., Towle V.L., Ben-Jacob E. Time invariant person specific frequency templates in human brain activity. Phys Rev Lett 2006, 96:258101.
14. Duncan J.S., Sander J.W., Sisodiya S.M., Walker M.C. Adult epilepsy. Lancet 2006, 367:1087-1100.
15. Engel A.K., Moll C.K.E., Fried I., Ojemann G.A. Invasive recordings from the human brain: clinical insights and beyond. Nat Rev Neurosci 2005, 6:35-46.
16. Jacobs J., LeVan P., Chander R., Hall J., Dubeau F., Gotman J. Inter-ictal high-frequency oscillations (80-500Hz) are an indicator of seizure onset areas independent of spikes in the human epileptic brain. Epilepsia 2008, 49(11):1893-1907.
17. Le Van Quyen M., Adam C., Baulac M., Martinerie J., Varela F.J. Nonlinear interdependencies of EEG signals in human intracranially recorded temporal lobe seizures. Brain Res 1998, 792:24-40.
18. Le Van Quyen M., Foucher J., Lachaux J.P., Rodriguez E., Lutz A., Martinerie J., et al. Comparison of Hilbert transform and wavelet methods for the analysis of neuronal synchrony. J Neurosci Methods 2001, 111(2):83-98.
19. Lee D.J., Antani S., Long L.R. Similarity measurement using polygon curve representation and fourier descriptors for shape-based vertebral image retrieval. SPIE Med Imaging: Image Process 2003, 5032:1283-1291.
20. Lehnertz K. Epilepsy and nonlinear dynamics. J Biol Phys 2008, 34:253-266.
21. Lehnertz K., Andrzejak R.G., Arnhold J., Kreuz T., Mormann F., Rieke C., et al. Nonlinear EEG analysis in epilepsy: its possible use for interictal focus localization, seizure anticipation, and prevention. J Clin Neurophysiol 2001, 18(3):209.
22. Lehnertz K., Elger C.E. Spatio-temporal dynamics of the primary epileptogenic area in temporal lobe epilepsy characterized by neuronal complexity loss. Clin Neurophysiol 1995, 95(2):108-117.
23. Litt B., Echauz J. Prediction of epileptic seizures. Lancet Neurol 2002, 1:22-30.
24. Mallat S. A wavelet tour of signal processing 1998, Academic Press, San Diego.
25. Marosi E., Harmony T., Becker J., Reyes A., Bernal J., Fernández T., et al. Electroencephalographic coherences discriminate between children with different pedagogical evaluation. Int J Psychophysiol 1995, 19(1):23-32.
26. Meier R., Dittrich H., Schulze-Bonhage A., Aertsen A. Detecting epileptic seizures in long-term human EEG: a new approach to automatic online and real-time detection and classification of polymorphic seizure patterns. J Clin Neurophysiol 2008, 25(3):119-131.
27. Meier R., Haussler U., Aertsen A., Deransart C., Depaulis A., Egert U. Short-term changes in bilateral hippocampal coherence precede epileptiform events. Neuroimage 2007, 38(1):138-149.
28. Mormann F., Andrzejak R., Kreuz T., Rieke C., David P., Elger C.E., et al. Automated detection of a preseizure state based on a decrease in synchronization in intracranial electroencephalogram recordings from epilepsy patients. Phys Rev E 2003, 67:021912.
29. Mormann F., Lehnertz K., David P., Elger C.E. Mean phase coherence as a measure for phase synchronization and its application to the EEG of epilepsy patients. Phys D 2000, 144:358-369.
30. Mormann F., Kreuz T., Rieke C., Andrzejak R.G., Kraskov A., David P., et al. On the predictability of epileptic seizures. Clin Neurophysiol 2005, 116:569-587.
31. Panet-Raymond D., Gotman J. Asymmetry in delta activity in patients with focal epilepsy. Electroencephalogr Clin Neurophysiol 1990, 75:474-481.
32. Quian Quiroga R., Kreuz T., Grassberger P. Event synchronization: a simple and fast method to measure synchronicity and time delay patterns. Phys Rev E 2002, 66:041904.
33. Quian Quiroga R., Kreuz T., Grassberger P. Performance of different synchronization measures in real data: a case study on electroencephalographic signals. Phys Rev E 2002, 65:041903.
34. Sander J.W. The use of antiepileptic drugs-principles and practice. Epilepsia 2004, 45(6):28-34.
35. Schad A., Schindler K., Schelter B., Maiwald T., Brant A., Timmer J., et al. Application of a multivariate seizure detection and prediction method to non-invasive and intracranial long-term EEG recordings. Clin Neurophysiol 2008, 119:197-211.
36. Schäfer C., Rosenblum M.G., Abel H.H., Kurths J. Synchronization in human cardiorespiratory system. Phys Rev E 1999, 60:857-870.
37. Schevon C.A., Cappell J., Emerson R., Isler J., Grieve P., Goodman R., et al. Cortical abnormalities in epilepsy revealed by EEG synchrony. Neuroimage 2007, 35:140.
38. Schindler K., Leung H., Elger C.E., Lehnertz K. Assessing seizure dynamics by analysing the correlation structure of multichannel intracranial EEG. Brain 2007, 130:65-77.
39. Staba R.J., Wilson C.L., Bragin A., Fried I., Engel J. Quantitative analysis of high-frequency oscillations (80-500Hz) recorded in human epileptic hippocampus and entorhinal cortex. J Neurophysiol 2002, 88:1743-1752.
40. Theodorou D.N., Suter U.M. Shape of unperturbed linear polymers: polypropylene. Macromolecules 1985, 18(6):1206-1214.
41. Towle V.L., Carder R.K., Khorasani L., Lindberg D. Electrocorticographic coherence patterns. J Clin Neurophysiol 1999, 16:528-547.
42. Towle V.L., Syed I., Berger C., Grzesczcuk R., Milton J., Erickson R.K., et al. Identification of sensory/motor area and pathological regions using ECoG coherence. Electroencephalogr Clin Neurophysiol 1998, 106:30-39.
43. Varela F., Lachaux J.P., Rodriguez E., Martinerie J. The brainweb: phase synchronization and large scale integration. Nat Rev Neurosci 2001, 2:229-239.
44. Wieser H.G., Blume W.T., Fish D., Goldensohn E., Hufnagel A., King D., et al. Proposal for a new classification of outcome with respect to epileptic seizures following epilepsy surgery. Epilepsia 2001, 42:282-286.
45. Weiss S., Mueller H.M. The contribution of EEG coherence to the investigation of language. Brain Lang 2003, 85:325-343.
46. Welch P.D. The use of fast fourier transform for the estimation of power spectra: a method based on time averaging over short, modified periodograms. IEEE Trans Audio Electroacoust 1967, AU-15:70-73.
47. Worrel G.A., Parish L., Cranstoun S.D., Jonas R., Baltuch G., Litt B. High-frequency oscillations and seizure generation in neocortical epilepsy. Brain 2004, 127(7):1496-1506.
48. Yang C. Music database retrieval based on spectral similarity. Proc Second Annul Int Symp Music Inf Retr 2001, 37-38.