-
1
-
-
56549101959
-
Alternative isoform regulation in human tissue transcriptomes
-
Wang, E.T., Sandberg, R., Luo, S., Khrebtukova, I., Zhang, L., Mayr, C., Kingsmore, S.F., Schroth, G.P. and Burge, C.B. (2008) Alternative isoform regulation in human tissue transcriptomes. Nature, 456, 470-476.
-
(2008)
Nature
, vol.456
, pp. 470-476
-
-
Wang, E.T.1
Sandberg, R.2
Luo, S.3
Khrebtukova, I.4
Zhang, L.5
Mayr, C.6
Kingsmore, S.F.7
Schroth, G.P.8
Burge, C.B.9
-
2
-
-
56749098074
-
Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
-
Pan, Q., Shai, O., Lee, L.J., Frey, B.J. and Blencowe, B.J. (2008) Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing. Nat. Genet., 40, 1413-1415.
-
(2008)
Nat. Genet.
, vol.40
, pp. 1413-1415
-
-
Pan, Q.1
Shai, O.2
Lee, L.J.3
Frey, B.J.4
Blencowe, B.J.5
-
3
-
-
75849145292
-
Expansion of the eukaryotic proteome by alternative splicing
-
Nilsen, T.W. and Graveley, B.R. (2010) Expansion of the eukaryotic proteome by alternative splicing. Nature, 463, 457-463.
-
(2010)
Nature
, vol.463
, pp. 457-463
-
-
Nilsen, T.W.1
Graveley, B.R.2
-
4
-
-
70350569286
-
Mechanisms of alternative splicing regulation: Insights from molecular and genomics approaches
-
Chen, M. and Manley, J.L. (2009) Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches. Nat. Rev. Mol. Cell Biol., 10, 741-754.
-
(2009)
Nat. Rev. Mol. Cell Biol.
, vol.10
, pp. 741-754
-
-
Chen, M.1
Manley, J.L.2
-
5
-
-
60149093432
-
RNA and disease
-
Cooper, T.A., Wan, L. and Dreyfuss, G. (2009) RNA and disease. Cell, 136, 777-793.
-
(2009)
Cell
, vol.136
, pp. 777-793
-
-
Cooper, T.A.1
Wan, L.2
Dreyfuss, G.3
-
6
-
-
0036512117
-
Messenger-RNA-binding proteins and the messages they carry
-
Dreyfuss, G., Kim, V.N. and Kataoka, N. (2002) Messenger-RNA-binding proteins and the messages they carry. Nat. Rev. Mol. Cell. Biol., 3, 195-205.
-
(2002)
Nat. Rev. Mol. Cell. Biol.
, vol.3
, pp. 195-205
-
-
Dreyfuss, G.1
Kim, V.N.2
Kataoka, N.3
-
7
-
-
70350010120
-
Depletion of T-cell intracellular antigen proteins promotes cell proliferation
-
Reyes, R., Alcalde, J. and Izquierdo, J.M. (2009) Depletion of T-cell intracellular antigen proteins promotes cell proliferation. Genome Biol., 10, R87.
-
(2009)
Genome Biol.
, vol.10
-
-
Reyes, R.1
Alcalde, J.2
Izquierdo, J.M.3
-
8
-
-
0026091180
-
A polyadenylate binding protein localized to the granules of cytolytic lymphocytes induces DNA fragmentation in target cells
-
Tian, Q., Streuli, M., Saito, H., Schlossman, S.F. and Anderson, P. (1991) A polyadenylate binding protein localized to the granules of cytolytic lymphocytes induces DNA fragmentation in target cells. Cell, 67, 629-639.
-
(1991)
Cell
, vol.67
, pp. 629-639
-
-
Tian, Q.1
Streuli, M.2
Saito, H.3
Schlossman, S.F.4
Anderson, P.5
-
9
-
-
0030027575
-
Individual RNA recognition motifs of TIA-1 and TIAR have different RNA binding specificities
-
Dember, L.M., Kim, N.D., Liu, K.Q. and Anderson, P. (1996) Individual RNA recognition motifs of TIA-1 and TIAR have different RNA binding specificities. J. Biol. Chem., 271, 2783-2788.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 2783-2788
-
-
Dember, L.M.1
Kim, N.D.2
Liu, K.Q.3
Anderson, P.4
-
10
-
-
0033838148
-
0 splice site
-
0 splice site. Mol. Cell. Biol., 20, 6287-6299.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 6287-6299
-
-
Del Gatto-Konczak, F.1
Bourgeois, C.F.2
Le Guiner, C.3
Kister, L.4
Gesnel, M.C.5
Stevenin, J.6
Breathnach, R.7
-
11
-
-
0033636996
-
The apoptosis-promoting factor TIA-1 is a regulator of alternative pre-mRNA splicing
-
Forch, P., Puig, O., Kedersha, N., Martnez, C., Granneman, S., Seraphin, B., Anderson, P. and Valcarcel, J. (2000) The apoptosis-promoting factor TIA-1 is a regulator of alternative pre-mRNA splicing. Mol. Cell, 6, 1089-1098.
-
(2000)
Mol. Cell
, vol.6
, pp. 1089-1098
-
-
Forch, P.1
Puig, O.2
Kedersha, N.3
Martnez, C.4
Granneman, S.5
Seraphin, B.6
Anderson, P.7
Valcarcel, J.8
-
13
-
-
23744492690
-
Regulation of Fas alternative splicing by antagonistic effects of TIA-1 and PTB on exon definition
-
Izquierdo, J.M., Majos, N., Bonnal, S., Martnez, C., Castelo, R., Guigo, R., Bilbao, D. and Valcarcel, J. (2005) Regulation of Fas alternative splicing by antagonistic effects of TIA-1 and PTB on exon definition. Mol. Cell, 19, 475-484.
-
(2005)
Mol. Cell
, vol.19
, pp. 475-484
-
-
Izquierdo, J.M.1
Majos, N.2
Bonnal, S.3
Martnez, C.4
Castelo, R.5
Guigo, R.6
Bilbao, D.7
Valcarcel, J.8
-
14
-
-
48949103996
-
0 splice sites reveals a widespread role for U-rich motifs and TIA1/TIAL1 proteins in alternative splicing regulation
-
0 splice sites reveals a widespread role for U-rich motifs and TIA1/TIAL1 proteins in alternative splicing regulation. Genome Res., 18, 1247-1258.
-
(2008)
Genome Res.
, vol.18
, pp. 1247-1258
-
-
Aznarez, I.1
Barash, Y.2
Shai, O.3
He, D.4
Zielenski, J.5
Tsui, L.C.6
Parkinson, J.7
Frey, B.J.8
Rommens, J.M.9
Blencowe, B.J.10
-
16
-
-
27144434377
-
Identification and functional outcome of mRNAs associated with RNA-binding protein TIA-1
-
Lopez de Silanes, I., Galban, S., Martindale, J.L., Yang, X., Mazan-Mamczarz, K., Indig, F.E., Falco, G., Zhan, M. and Gorospe, M. (2005) Identification and functional outcome of mRNAs associated with RNA-binding protein TIA-1. Mol. Cell. Biol., 25, 9520-9531.
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 9520-9531
-
-
Lopez De Silanes, I.1
Galban, S.2
Martindale, J.L.3
Yang, X.4
Mazan-Mamczarz, K.5
Indig, F.E.6
Falco, G.7
Zhan, M.8
Gorospe, M.9
-
17
-
-
33645228527
-
Translational repression by RNA-binding protein TIAR
-
Mazan-Mamczarz, K., Lal, A., Martindale, J.L., Kawai, T. and Gorospe, M. (2006) Translational repression by RNA-binding protein TIAR. Mol. Cell. Biol., 26, 2716-2727.
-
(2006)
Mol. Cell. Biol.
, vol.26
, pp. 2716-2727
-
-
Mazan-Mamczarz, K.1
Lal, A.2
Martindale, J.L.3
Kawai, T.4
Gorospe, M.5
-
18
-
-
34748820470
-
Elucidation of a C-rich signature motif in target mRNAs of RNA-binding protein TIAR
-
Kim, H.S., Kuwano, Y., Zhan, M., Pullmann, R. Jr, Mazan-Mamczarz, K., Li, H., Kedersha, N., Anderson, P., Wilce, M.C. and Gorospe, M. (2007) Elucidation of a C-rich signature motif in target mRNAs of RNA-binding protein TIAR. Mol. Cell. Biol., 27, 6806-6817.
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 6806-6817
-
-
Kim, H.S.1
Kuwano, Y.2
Zhan, M.3
Pullmann Jr., R.4
Mazan-Mamczarz, K.5
Li, H.6
Kedersha, N.7
Anderson, P.8
Wilce, M.C.9
Gorospe, M.10
-
19
-
-
35648933435
-
T-cell intracellular antigen-1 (TIA-1)-induced translational silencing promotes the decay of selected mRNAs
-
Yamasaki, S., Stoecklin, G., Kedersha, N., Simarro, M. and Anderson, P. (2007) T-cell intracellular antigen-1 (TIA-1)-induced translational silencing promotes the decay of selected mRNAs. J. Biol. Chem., 282, 30070-30077.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 30070-30077
-
-
Yamasaki, S.1
Stoecklin, G.2
Kedersha, N.3
Simarro, M.4
Anderson, P.5
-
20
-
-
34547111077
-
Two isoforms of the T-cell intracellular antigen 1 (TIA-1) splicing factor display distinct splicing regulation activities. Control of TIA-1 isoform ratio by TIA-1-related protein
-
Izquierdo, J.M. and Valcarcel, J. (2007) Two isoforms of the T-cell intracellular antigen 1 (TIA-1) splicing factor display distinct splicing regulation activities. Control of TIA-1 isoform ratio by TIA-1-related protein. J. Biol. Chem., 282, 19410-19417.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 19410-19417
-
-
Izquierdo, J.M.1
Valcarcel, J.2
-
21
-
-
33847308702
-
Fas-activated serine/ threonine kinase (FAST K) synergizes with TIA-1/TIAR proteins to regulate Fas alternative splicing
-
Izquierdo, J.M. and Valcarcel, J. (2007) Fas-activated serine/ threonine kinase (FAST K) synergizes with TIA-1/TIAR proteins to regulate Fas alternative splicing. J. Biol. Chem., 282, 1539-1543.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 1539-1543
-
-
Izquierdo, J.M.1
Valcarcel, J.2
-
22
-
-
49649128843
-
Hu antigen R (HuR) functions as an alternative pre-mRNA splicing regulator of Fas apoptosis-promoting receptor on exon definition
-
Izquierdo, J.M. (2008) Hu antigen R (HuR) functions as an alternative pre-mRNA splicing regulator of Fas apoptosis-promoting receptor on exon definition. J. Biol. Chem., 283, 19077-19084.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 19077-19084
-
-
Izquierdo, J.M.1
-
23
-
-
34249710868
-
Cooperative binding of TIA1 and U1 snRNP in K-SAM exon splicing activation
-
Gesnel, M.C., Theoleyre, S., Del Gatto-Konczak, F. and Breathnach, R. (2007) Cooperative binding of TIA1 and U1 snRNP in K-SAM exon splicing activation. Biochem. Biophys. Res. Commun., 358, 1065-1070.
-
(2007)
Biochem. Biophys. Res. Commun.
, vol.358
, pp. 1065-1070
-
-
Gesnel, M.C.1
Theoleyre, S.2
Del Gatto-Konczak, F.3
Breathnach, R.4
-
24
-
-
54249164720
-
Fas splicing regulation during early apoptosis is linked to caspase-mediated cleavage of U2AF65
-
Izquierdo, J.M. (2008) Fas splicing regulation during early apoptosis is linked to caspase-mediated cleavage of U2AF65. Mol. Biol. Cell., 19, 3299-3307.
-
(2008)
Mol. Biol. Cell.
, vol.19
, pp. 3299-3307
-
-
Izquierdo, J.M.1
-
25
-
-
0029927505
-
Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels
-
Schevchenko, A., Wilm, M., Vorm, O. and Mann, M. (1996) Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels. Anal. Chem., 68, 850-858.
-
(1996)
Anal. Chem.
, vol.68
, pp. 850-858
-
-
Schevchenko, A.1
Wilm, M.2
Vorm, O.3
Mann, M.4
-
26
-
-
0242305651
-
A novel MALDI LIFT-TOF/TOF mass spectrometer for proteomics
-
Suckau, D., Resemann, A., Schuerenberg, M., Hufnagel, P., Franzen, J. and Holle, A. (2003) A novel MALDI LIFT-TOF/TOF mass spectrometer for proteomics. Anal. Bioanal. Chem., 376, 952-965.
-
(2003)
Anal. Bioanal. Chem.
, vol.376
, pp. 952-965
-
-
Suckau, D.1
Resemann, A.2
Schuerenberg, M.3
Hufnagel, P.4
Franzen, J.5
Holle, A.6
-
27
-
-
34447559956
-
Downregulation of hnRNP C1/C2 by siRNA sensitizes HeLa cells to various stresses
-
Hossain, M.N., Fuji, M., Miki, K., Endoh, M. and Ayusawa, D. (2007) Downregulation of hnRNP C1/C2 by siRNA sensitizes HeLa cells to various stresses. Mol. Cell. Biochem., 296, 151-157.
-
(2007)
Mol. Cell. Biochem.
, vol.296
, pp. 151-157
-
-
Hossain, M.N.1
Fuji, M.2
Miki, K.3
Endoh, M.4
Ayusawa, D.5
-
28
-
-
52649110671
-
Multiple and specific mRNA processing targets for the major human hnRNP proteins
-
Venables, J.P., Koh, C.S., Froehlich, U., Lapointe, E., Couture, S., Inkel, L., Bramard, A., Paquet, E.R., Watier, V., Durand, M. et al. (2008) Multiple and specific mRNA processing targets for the major human hnRNP proteins. Mol. Cell. Biol., 28, 6033-6043.
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 6033-6043
-
-
Venables, J.P.1
Koh, C.S.2
Froehlich, U.3
Lapointe, E.4
Couture, S.5
Inkel, L.6
Bramard, A.7
Paquet, E.R.8
Watier, V.9
Durand, M.10
-
29
-
-
33847352972
-
An essential function of the SRC-3 coactivator in suppression of cytokine mRNA translation and inflammatory response
-
Yu, C., York, B., Wang, S., Feng, Q., Xu, J. and O'Malley, B.W. (2007) An essential function of the SRC-3 coactivator in suppression of cytokine mRNA translation and inflammatory response. Mol. Cell, 25, 765-778.
-
(2007)
Mol. Cell
, vol.25
, pp. 765-778
-
-
Yu, C.1
York, B.2
Wang, S.3
Feng, Q.4
Xu, J.5
O'Malley, B.W.6
-
30
-
-
12644261402
-
RNA-dependent phosphorylation of a nuclear RNA binding protein
-
Fung, P.A., Labrecque, R. and Pederson, T. (1997) RNA-dependent phosphorylation of a nuclear RNA binding protein. Proc. Natl. Acad. Sci., 94, 1064-1068.
-
(1997)
Proc. Natl. Acad. Sci.
, vol.94
, pp. 1064-1068
-
-
Fung, P.A.1
Labrecque, R.2
Pederson, T.3
-
31
-
-
0027992089
-
The determinants of RNA-binding specificity of the heterogeneous nuclear ribonucleoprotein C proteins
-
Gorlach, M., Burd, C. and Dreyfuss, G. (1994) The determinants of RNA-binding specificity of the heterogeneous nuclear ribonucleoprotein C proteins. J. Biol. Chem., 269, 23074-23078.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 23074-23078
-
-
Gorlach, M.1
Burd, C.2
Dreyfuss, G.3
-
32
-
-
0029862801
-
A major determinant of hnRNP C protein binding to RNA is a novel bZIP-like RNA binding domain
-
McAfee, J., Shahied-Milam, L., Soltaninassab, S. and LeStourgeon, W. (1996) A major determinant of hnRNP C protein binding to RNA is a novel bZIP-like RNA binding domain. RNA, 2, 1139-1152.
-
(1996)
RNA
, vol.2
, pp. 1139-1152
-
-
McAfee, J.1
Shahied-Milam, L.2
Soltaninassab, S.3
Lestourgeon, W.4
-
33
-
-
0037125231
-
Interaction of hnRNP-C1/C2 proteins with RNA: Analysis using the yeast three-hybrid system
-
Koloteva-Levine, N., Amichay, M. and Elroy-Stein, O. (2002) Interaction of hnRNP-C1/C2 proteins with RNA: analysis using the yeast three-hybrid system. FEBS Lett., 523, 73-78.
-
(2002)
FEBS Lett.
, vol.523
, pp. 73-78
-
-
Koloteva-Levine, N.1
Amichay, M.2
Elroy-Stein, O.3
-
34
-
-
0029797247
-
The hnRNP C proteins contain a nuclear retention sequence that can override nuclear export signals
-
Nakielny, S. and Dreyfuss, G. (1996) The hnRNP C proteins contain a nuclear retention sequence that can override nuclear export signals. J. Cell Biol., 134, 1365-1373.
-
(1996)
J. Cell Biol.
, vol.134
, pp. 1365-1373
-
-
Nakielny, S.1
Dreyfuss, G.2
-
35
-
-
76849085628
-
Extensive association of HuR with hnRNP proteins within immunoselected hnRNP and mRNP complexes
-
Papadopoulou, C., Patrinou-Georgoula, M. and Guialis, A. (2010) Extensive association of HuR with hnRNP proteins within immunoselected hnRNP and mRNP complexes. Biochim. Biophys. Acta, 1804, 692-703.
-
(2010)
Biochim. Biophys. Acta
, pp. 692-703
-
-
Papadopoulou, C.1
Patrinou-Georgoula, M.2
Guialis, A.3
-
36
-
-
34250363024
-
SR proteins function in coupling RNAP II transcription to pre-mRNA splicing
-
Das, R., Yu, J., Zhang, Z., Gygi, M.P., Krainer, A.R., Gygi, S.P. and Reed, R. (2007) SR proteins function in coupling RNAP II transcription to pre-mRNA splicing. Mol. Cell, 26, 867-881.
-
(2007)
Mol. Cell
, vol.26
, pp. 867-881
-
-
Das, R.1
Yu, J.2
Zhang, Z.3
Gygi, M.P.4
Krainer, A.R.5
Gygi, S.P.6
Reed, R.7
-
37
-
-
32344437827
-
Novel modes of splicing repression by PTB
-
Spellman, R. and Smith, C.W. (2006) Novel modes of splicing repression by PTB. Trends Biochem. Sci., 31, 73-76.
-
(2006)
Trends Biochem. Sci.
, vol.31
, pp. 73-76
-
-
Spellman, R.1
Smith, C.W.2
-
39
-
-
77954387023
-
ICLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution
-
Konig, J., Zarnack, K., Rot, G., Curk, T., Kayikci, M., Zupan, B., Turner, D.J., Luscombe, N.M. and Ule, J. (2010) iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution. Nat. Struct. Mol. Biol., 17, 909-915.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 909-915
-
-
Konig, J.1
Zarnack, K.2
Rot, G.3
Curk, T.4
Kayikci, M.5
Zupan, B.6
Turner, D.J.7
Luscombe, N.M.8
Ule, J.9
-
40
-
-
75149150660
-
HnRNP proteins controlled by c-Myc deregulate pyruvate kinase mRNA splicing in cancer
-
David, C.J., Chen, M., Assanah, M., Canoll, P. and Manley, J.L. (2010) HnRNP proteins controlled by c-Myc deregulate pyruvate kinase mRNA splicing in cancer. Nature, 463, 364-368.
-
(2010)
Nature
, vol.463
, pp. 364-368
-
-
David, C.J.1
Chen, M.2
Assanah, M.3
Canoll, P.4
Manley, J.L.5
-
41
-
-
76649102764
-
The alternative splicing repressors hnRNP A1/A2 and PTB influence pyruvate kinase isoform expression and cell metabolism
-
Clower, C.V., Chatterjee, D., Wang, Z., Cantley, L.C., Vander Heiden, M.G. and Krainer, A.R. (2010) The alternative splicing repressors hnRNP A1/A2 and PTB influence pyruvate kinase isoform expression and cell metabolism. Proc. Natl. Acad. Sci., 107, 1894-1899.
-
(2010)
Proc. Natl. Acad. Sci.
, vol.107
, pp. 1894-1899
-
-
Clower, C.V.1
Chatterjee, D.2
Wang, Z.3
Cantley, L.C.4
Vander Heiden, M.G.5
Krainer, A.R.6
-
42
-
-
38949098620
-
Regulation of neuron-specific alternative splicing of neurofibromatosis type 1 pre-mRNA
-
Zhu, H., Hinman, M.N., Hasman, R.A., Mehta, P. and Lou, H. (2008) Regulation of neuron-specific alternative splicing of neurofibromatosis type 1 pre-mRNA. Mol. Cell. Biol., 28, 1240-1251.
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 1240-1251
-
-
Zhu, H.1
Hinman, M.N.2
Hasman, R.A.3
Mehta, P.4
Lou, H.5
-
43
-
-
0027275553
-
Cell cycle-regulated phosphorylation of the pre-mRNA-binding (heterogeneous nuclear ribonucleoprotein) C proteins
-
Pinol-Roma, S. and Dreyfuss, G. (1993) Cell cycle-regulated phosphorylation of the pre-mRNA-binding (heterogeneous nuclear ribonucleoprotein) C proteins. Mol. Cell. Biol., 13, 5762-5770.
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 5762-5770
-
-
Pinol-Roma, S.1
Dreyfuss, G.2
-
44
-
-
0037432070
-
Basal and hydrogen peroxide stimulated sites of phosphorylation in heterogeneous nuclear ribonucleoprotein C1/C2
-
Stone, J.R., Maki, J.L. and Collins, T. (2003) Basal and hydrogen peroxide stimulated sites of phosphorylation in heterogeneous nuclear ribonucleoprotein C1/C2. Biochemistry, 42, 1301-1308.
-
(2003)
Biochemistry
, vol.42
, pp. 1301-1308
-
-
Stone, J.R.1
Maki, J.L.2
Collins, T.3
-
45
-
-
17644379405
-
Protein kinase CK1alpha regulates mRNA binding by heterogeneous nuclear ribonucleoprotein C in response to physiologic levels of hydrogen peroxide
-
Kattapuram, T., Yang, S., Maki, J.L. and Stone, J.R. (2005) Protein kinase CK1alpha regulates mRNA binding by heterogeneous nuclear ribonucleoprotein C in response to physiologic levels of hydrogen peroxide. J. Biol. Chem., 280, 15340-15347.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 15340-15347
-
-
Kattapuram, T.1
Yang, S.2
Maki, J.L.3
Stone, J.R.4
-
46
-
-
0032534537
-
Co-transcriptional commitment to alternative splice site selection
-
Roberts, G.C., Gooding, C., Mak, H.Y., Proudfoot, N.J. and Smith, C.W. (1998) Co-transcriptional commitment to alternative splice site selection. Nucleic Acids Res., 26, 5568-5572.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 5568-5572
-
-
Roberts, G.C.1
Gooding, C.2
Mak, H.Y.3
Proudfoot, N.J.4
Smith, C.W.5
-
47
-
-
0141888375
-
A slow RNA polymerase II affects alternative splicing in vivo
-
De la Mata, M., Alonso, C.R., Kadener, S., Fededa, J.P., Blaustein, M., Pelisch, F., Cramer, P., Bentley, D. and Kornblihtt, A.R. (2003) A slow RNA polymerase II affects alternative splicing in vivo. Mol. Cell, 12, 525-532.
-
(2003)
Mol. Cell
, vol.12
, pp. 525-532
-
-
De La Mata, M.1
Alonso, C.R.2
Kadener, S.3
Fededa, J.P.4
Blaustein, M.5
Pelisch, F.6
Cramer, P.7
Bentley, D.8
Kornblihtt, A.R.9
-
48
-
-
69949132191
-
Chromatin organization marks exon-intron structure
-
Schwartz, S., Meshorer, E. and Ast, G. (2009) Chromatin organization marks exon-intron structure. Nat. Struct. Mol. Biol., 16, 990-996.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 990-996
-
-
Schwartz, S.1
Meshorer, E.2
Ast, G.3
-
49
-
-
69949124307
-
Nucleosome positioning as a determinant of exon recognition
-
Tilgner, H., Nikolaou, C., Althammer, S., Sammeth, M., Beato, M., Valcarcel, J. and Guigo, R. (2009) Nucleosome positioning as a determinant of exon recognition. Nat. Struct. Mol. Biol., 16, 996-1002.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 996-1002
-
-
Tilgner, H.1
Nikolaou, C.2
Althammer, S.3
Sammeth, M.4
Beato, M.5
Valcarcel, J.6
Guigo, R.7
-
50
-
-
77149175671
-
Regulation of alternative splicing by histone modifications
-
Luco, R.F., Pan, Q., Tominaga, K., Blencowe, B.J., Pereira-Smith, O.M. and Misteli, T. (2010) Regulation of alternative splicing by histone modifications. Science, 327, 996-1000.
-
(2010)
Science
, vol.327
, pp. 996-1000
-
-
Luco, R.F.1
Pan, Q.2
Tominaga, K.3
Blencowe, B.J.4
Pereira-Smith, O.M.5
Misteli, T.6
-
51
-
-
27244449015
-
Heterogeneous nuclear ribonucleoprotein C1/C2, MeCP1, and SWI/SNF form a chromatin remodeling complex at the beta-globin locus control region
-
Mahajan, M.C., Narlikar, G.J., Boyapaty, G., Kingston, R.E. and Weissman, S.M. (2005) Heterogeneous nuclear ribonucleoprotein C1/C2, MeCP1, and SWI/SNF form a chromatin remodeling complex at the beta-globin locus control region. Proc. Natl Acad. Sci., 102, 15012-15017.
-
(2005)
Proc. Natl Acad. Sci.
, vol.102
, pp. 15012-15017
-
-
Mahajan, M.C.1
Narlikar, G.J.2
Boyapaty, G.3
Kingston, R.E.4
Weissman, S.M.5
-
52
-
-
30044441988
-
The human SWI/ SNF subunit Brm is a regulator of alternative splicing
-
Batsche, E., Yaniv, M. and Muchardt, C. (2006) The human SWI/ SNF subunit Brm is a regulator of alternative splicing. Nat. Struct. Mol. Biol., 13, 22-29.
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 22-29
-
-
Batsche, E.1
Yaniv, M.2
Muchardt, C.3
-
53
-
-
33748351186
-
Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells
-
Listerman, I., Sapra, A.K. and Neugebauer, K.M. (2006) Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells. Nat. Struct. Mol. Biol., 13, 815-822.
-
(2006)
Nat. Struct. Mol. Biol.
, vol.13
, pp. 815-822
-
-
Listerman, I.1
Sapra, A.K.2
Neugebauer, K.M.3
-
54
-
-
64749099643
-
SR protein family members display diverse activities in the formation of nascent and mature mRNPs in vivo
-
Sapra, A.K., Anko, M.L., Grishina, I., Lorenz, M., Pabis, M., Poser, I., Rollins, J., Weiland, E.M. and Neugebauer, K.M. (2009) SR protein family members display diverse activities in the formation of nascent and mature mRNPs in vivo. Mol Cell, 34, 179-190.
-
(2009)
Mol Cell
, vol.34
, pp. 179-190
-
-
Sapra, A.K.1
Anko, M.L.2
Grishina, I.3
Lorenz, M.4
Pabis, M.5
Poser, I.6
Rollins, J.7
Weiland, E.M.8
Neugebauer, K.M.9
-
55
-
-
34548600067
-
U2AF-homology motif interactions are required for alternative splicing regulation by SPF45
-
Corsini, L., Bonnal, S., Basquin, J., Hothorn, M., Scheffzek, K., Valcarcel, J. and Sattler, M.J. (2007) U2AF-homology motif interactions are required for alternative splicing regulation by SPF45. Nat. Struct. Mol. Biol., 14, 620-629.
-
(2007)
Nat. Struct. Mol. Biol.
, vol.14
, pp. 620-629
-
-
Corsini, L.1
Bonnal, S.2
Basquin, J.3
Hothorn, M.4
Scheffzek, K.5
Valcarcel, J.6
Sattler, M.J.7
-
56
-
-
53149145051
-
RBM5/Luca-15/H37 regulates Fas alternative splice site pairing after exon definition
-
Bonnal, S., Martnez, C., Forch, P., Bachi, A., Wilm, M. and Valcarcel, J. (2008) RBM5/Luca-15/H37 regulates Fas alternative splice site pairing after exon definition. Mol. Cell, 32, 81-95.
-
(2008)
Mol. Cell
, vol.32
, pp. 81-95
-
-
Bonnal, S.1
Martnez, C.2
Forch, P.3
Bachi, A.4
Wilm, M.5
Valcarcel, J.6
-
57
-
-
26944489645
-
Building specificity with nonspecific RNA-binding proteins
-
Singh, R. and Valcarcel, J. (2005) Building specificity with nonspecific RNA-binding proteins. Nat. Struct. Mol. Biol., 12, 645-653.
-
(2005)
Nat. Struct. Mol. Biol.
, vol.12
, pp. 645-653
-
-
Singh, R.1
Valcarcel, J.2
-
58
-
-
77952029221
-
Deciphering the splicing code
-
Barash, Y., Calarco, J.A., Gao, W., Pan, Q., Wang, X., Shai, O., Blencowe, B.J. and Frey, B.J. (2010) Deciphering the splicing code. Nature, 465, 53-59.
-
(2010)
Nature
, vol.465
, pp. 53-59
-
-
Barash, Y.1
Calarco, J.A.2
Gao, W.3
Pan, Q.4
Wang, X.5
Shai, O.6
Blencowe, B.J.7
|