Expression, in vivo localization and phylogenetic analysis of a pyridoxine 5′-phosphate oxidase in Arabidopsis thaliana

Plant Physiology and Biochemistry

Volumn 49, Issue 1, 2011, Pages 88-95

  Sang, Yuying ^a   Locy, Robert D ^a   Goertzen, Leslie R ^a   Rashotte, Aaron M ^a   Si, Ying ^a   Kang, Kwonkyoo ^b   Singh, Narendra K ^a  

^a AUBURN UNIVERSITY   (United States)

^b Hankyong National University   (South Korea)

Author keywords

Arabidopsis thaliana; Chloroplast localization; Pyridox_oxidase domain; RNAi mutants; Yjef_N domain

Indexed keywords

ARABIDOPSIS PROTEIN; MONOCLONAL ANTIBODY; PYRIDOXAMINE PHOSPHATE OXIDASE; SMALL INTERFERING RNA;

ARABIDOPSIS; ARTICLE; BACTERIUM; CHLOROPLAST; ENZYMOLOGY; FUNGUS; GENE EXPRESSION; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; IMMUNOLOGY; LIGHT; METABOLISM; MUTATION; OXIDATION REDUCTION REACTION; OXIDATIVE STRESS; PHYLOGENY; PLANT GENE; PLANT ROOT; PROTOPLAST; SYMBIOSIS;

ANTIBODIES, MONOCLONAL; ARABIDOPSIS; ARABIDOPSIS PROTEINS; BACTERIA; CHLOROPLASTS; FUNGI; GENE EXPRESSION; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; LIGHT; MUTATION; OXIDATION-REDUCTION; OXIDATIVE STRESS; PHYLOGENY; PLANT ROOTS; PROTOPLASTS; PYRIDOXAMINEPHOSPHATE OXIDASE; RNA, SMALL INTERFERING; SYMBIOSIS;

ANIMALIA; ARABIDOPSIS; ARABIDOPSIS THALIANA; BACTERIA (MICROORGANISMS); FUNGI;

EID: 78650256676     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plaphy.2010.10.003     Document Type: Article

References (29)

1. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W., Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 1997, 25:3389-3402.
2. Bradford M.M. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 1976, 72:248-254.
3. Chen H., Xiong L. Pyridoxine is required for post-embryonic root development and tolerance to osmotic and oxidative stresses. Plant J. 2005, 44:396-408.
4. Denslow S.A., Rueschhoff E.E., Daub M.E. Regulation of the Arabidopsis thaliana vitamin B6 biosynthesis genes by abiotic stress. Plant Physiol. Biochem. 2007, 45:152-161.
5. Denslow S.A., Walls A.A., Daub M.E. Regulation of biosynthetic genes and antioxidant properties of vitamin B6 vitamers during plant defense responses. Physiol. Mol. Plant Pathol. 2005, 66:244-255.
6. Ehrenshaft M., Bilski P., Li M.Y., Chignell C.F., Daub M.E. A highly conserved sequence is a novel gene involved in de novo vitamin B6 biosynthesis. Proc. Natl. Acad. Sci. U.S.A. 1999, 96:9374-9378.
7. Gonzalez E., Danehower D., Daub M.E. Vitamer levels, stress response, enzyme activity, and gene regulation of Arabidopsis lines mutant in the pyridoxine/pyridoxamine 5'-phosphate oxidase (PDX3) and the pyridoxal kinase (SOS4) genes involved in the vitamin B6 salvage pathway. Plant Physiol. 2007, 145:985-996.
8. Graham C.M., Ehrenshaft M., Hausner G., Reid D.M. A highly conserved gene for vitamin B6 biosynthesis may have consequences for stress and hormone responses in plants. Physiol. Plant. 2004, 121:8-14.
9. Havaux M., Ksas B., Szewczyk A., Rumeau D., Franck F., Caffarri S., Triantaphylides C. Vitamin B6 deficient plants display increased sensitivity to high light and photo-oxidative stress. BMC Plant Biol. 2009, 9:130-152.
10. Jain S.K., Lim G. Pyridoxine and pyridoxamine inhibits superoxide radicals and prevents lipid peroxidation, protein glycosylation, and (Na++K+)-ATPase activity reduction in high glucose-treated human erythrocytes. Free Radic. Biol. Med. 2001, 30:232-237.
11. John R.A. Pyridoxal phosphate-dependent enzymes. Biochim. Biophys. Acta 1995, 1248:81-96.
12. Keith E., Haag J.R., Pontes O., Opper K., Juehne T., Song K., Pikaard C.S. Gateway-compatible vectors for plant functional genomics and proteomics. Plant J. 2006, 45:616-629.
13. Lum H., Kwok F., Lo S. Cloning and characterization of Arabidopsis thaliana pyridoxal kinase. Planta 2002, 215:870-879.
14. Moreno J.I., Martin R., Castresana C. Arabidopsis SHMT1, a serine hydroxymethyltransferase that functions in the photorespiratory pathway influences resistance to biotic and abiotic stress. Plant J. 2005, 41:451-463.
15. Muller-Moule P., Havaux M., Niyogi K.K. Zeaxanthindeficiency enhances the high light sensitivity of an ascorbate-deficient mutant of Arabidopsis. Plant Physiol. 2003, 133:748-760.
16. Osmani A.H., May G.S., Osmani S.A. The extremely conserved pyroA gene of Aspergillus nidulans is required for pyridoxine synthesis and is required indirectly for resistance to photosensitizers. J. Biol. Chem. 1999, 274:23565-23569.
17. Rashotte A.M., Mason M.G., Hutchinson C.E., Ferriera F.J., Schaller G.E., Kieber J.J. Asubset of Arabidopsis AP2 transcription factors mediates cytokinine response in concert with a two-component pathway. Proc. Natl. Acad. Sci. U.S.A. 2006, 103:11081-11085.
18. Sang Y., Barbosa J.M., Wu H., Locy R.D., Singh N.K. Identification of a pyridoxine (pyridoxamine) 5'-phosphate oxidase from Arabidopsis thaliana. FEBS Lett. 2007, 581:344-348.
19. Y. Sang, L.R. Goertzen, Y.-M. Tzou, R.D. Locy, N.K. Singh, Identification of a second pyridoxine (pyridoxamine) 5-phosphate oxidase in Arabidopsis thaliana, Acta Physiol. Plant., in press, doi: 10.1007s/11738-010-0579-6.
20. Sheen J. Molecular mechanisms underlying the differential expression of maize pyruvate, orthophosphate dikinase genes. Plant Cell 1991, 3:225-245.
21. Shi H., Xiong L., Stevenson B., Lu T., Zhu J. The Arabidopsis salt overly sensitive 4 mutants uncover a critical role for vitamin B6 in plant salt tolerance. Plant Cell 2002, 14:575-588.
22. Shi H., Zhu J. SOS4, a pyridoxal kinase gene, is required for root hair development in Arabidopsis. Plant Physiol. 2002, 129:585-593.
23. Somerville C.R., Ogren W.I. Photorespiration deficient mutants of Arabidopsis thaliana lacking mitochondrial serine transhydroxymethylase activity. Plant Physiol. 1981, 666-671.
24. Studart M.T., Titiz O., Raschle T., Forster G., Amrhein N., Fitzpatrick T.B. Vitamin B6 biosynthesis in higher plants. Proc. Natl. Acad. Sci. U.S.A. 2005, 102:13687-13692.
25. Swofford D.L. PAUP*: Phylogenetic Analysis Using Parsimony (* And Other Methods. Version 4) 2002, Sinauer Associates, Sunderland, Massachusetts.
26. Tambasco-studart M., Tews I., Amrhein N., Fitzpatrick T.B. Functional analysis of PDX2 from Arabidopsis, a glutaminase involved in vitamin B6 biosynthesis. Plant Physiol. 2007, 144:915-925.
27. Thompson J.D., Higgins D.G., Gibson T.J. CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic. Acids Res. 1994, 22:4673-4680.
28. Titiz O., Studart M.T., Warzych E., Apel K., Amrhein N., Laloi C., Fitzpatrick T.B. PDX1 is essential for vitamin B6 biosynthesis, development and stress tolerance in Arabidopsis. Plant J. 2006, 48:933-946.
29. Wagner S., Bernhardt A., Leuendorf J.E., Drewke C., Lytovchenko A., Mujahed N., Gurgui C., Frommer W.B., Leistner E., Femie A.R., Hellmann H. Analysis of the Arabidopsis rsr4-1/pdx1-3 mutant reveals the critical function of the PDX1 protein family in metabolism, development, and vitamin B6 biosynthesis. Plant Cell 2006, 18:1722-1735.