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Volumn 5, Issue 12, 2010, Pages

Evolution of disease response genes in loblolly pine: Insights from candidate genes

Author keywords

[No Author keywords available]

Indexed keywords

AUXIN RESPONSE FACTOR; CAFFEOYL COENZYME A METHYLTRANSFERASE; CHROMATIN ASSEMBLY FACTOR; CYTOCHROME P450 LIKE PROTEIN; EARLY RESPONSE TO DROUGHT 3 PROTEIN; ETHYLENE RESPONSIVE FACTOR 1; GATA BINDING PROTEIN 1; PATHOGEN RESPONSE 4.3 PROTEIN; UNCLASSIFIED DRUG; VEGETABLE PROTEIN; CELLULOSE; PLANT DNA;

EID: 78650149909     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0014234     Document Type: Article
Times cited : (21)

References (39)
  • 1
  • 2
    • 0037726955 scopus 로고    scopus 로고
    • Evolution of plant resistance at the molecular level: Ecological context of species interactions
    • de Meaux J, Mitchell-Olds T (2003) Evolution of plant resistance at the molecular level: ecological context of species interactions. Heredity. pp 345-352.
    • (2003) Heredity , pp. 345-352
    • de Meaux, J.1    Mitchell-Olds, T.2
  • 3
    • 0034913885 scopus 로고    scopus 로고
    • Quantitative Trait Loci analysis of powdery mildew disease resistance in the Arabidopsis thaliana accession Kashmir-1
    • Wilson IW, Schiff CL, Hughes DE, Somerville SC (2001) Quantitative Trait Loci analysis of powdery mildew disease resistance in the Arabidopsis thaliana accession Kashmir-1. Genetics 158: 1301-1309.
    • (2001) Genetics , vol.158 , pp. 1301-1309
    • Wilson, I.W.1    Schiff, C.L.2    Hughes, D.E.3    Somerville, S.C.4
  • 4
    • 0036672065 scopus 로고    scopus 로고
    • Genetic architecture of plastic methyl jasmonate responses in Arabidopsis thaliana
    • Kliebenstein DJ, Figuth A, Mitchell-Olds T (2002) Genetic architecture of plastic methyl jasmonate responses in Arabidopsis thaliana. Genetics 161: 1685-1696.
    • (2002) Genetics , vol.161 , pp. 1685-1696
    • Kliebenstein, D.J.1    Figuth, A.2    Mitchell-Olds, T.3
  • 5
    • 77957077437 scopus 로고
    • The complementary genic systems in flax and flax rust
    • Flor HH (1956) The complementary genic systems in flax and flax rust. Advances in Genetics 8: 29-54.
    • (1956) Advances in Genetics , vol.8 , pp. 29-54
    • Flor, H.H.1
  • 7
    • 33751073183 scopus 로고    scopus 로고
    • Molecular evolution of plant immune system genes
    • Tiffin P, Moeller DA (2006) Molecular evolution of plant immune system genes. Trends in Genetics 22: 662-670.
    • (2006) Trends in Genetics , vol.22 , pp. 662-670
    • Tiffin, P.1    Moeller, D.A.2
  • 8
    • 0033549777 scopus 로고    scopus 로고
    • Dynamics of disease resistance polymorphism at the Rpm1 locus of Arabidopsis
    • Stahl EA, Dwyer G, Mauricio R, Kreitman M, Bergelson J (1999) Dynamics of disease resistance polymorphism at the Rpm1 locus of Arabidopsis. Nature 400: 667-671.
    • (1999) Nature , vol.400 , pp. 667-671
    • Stahl, E.A.1    Dwyer, G.2    Mauricio, R.3    Kreitman, M.4    Bergelson, J.5
  • 12
    • 34249089816 scopus 로고    scopus 로고
    • Natural variation in the Pto disease resistance gene within species of wild tomato (Lycopersicon). II. Population genetics of Pto
    • Rose LE, Michelmore RW, Langley CH (2007) Natural variation in the Pto disease resistance gene within species of wild tomato (Lycopersicon). II. Population genetics of Pto. Genetics 175: 1307-1319.
    • (2007) Genetics , vol.175 , pp. 1307-1319
    • Rose, L.E.1    Michelmore, R.W.2    Langley, C.H.3
  • 13
    • 27844441222 scopus 로고    scopus 로고
    • Genetic diversity and the evolutionary history of plant immunity genes in two species of Zea
    • Moeller DA, Tiffin P (2005) Genetic diversity and the evolutionary history of plant immunity genes in two species of Zea. Mol Biol Evol 22: 2480-2490.
    • (2005) Mol Biol Evol , vol.22 , pp. 2480-2490
    • Moeller, D.A.1    Tiffin, P.2
  • 14
    • 33645219360 scopus 로고    scopus 로고
    • DNA sequence variation and selection of tag Single-Nucleotide Polymorphisms at candidate genes for drought-stress response in Pinus taeda L
    • González-Martínez SC, Ersoz E, Brown GR, Wheeler NC, Neale DB (2006) DNA sequence variation and selection of tag Single-Nucleotide Polymorphisms at candidate genes for drought-stress response in Pinus taeda L. Genetics 172: 1915-1926.
    • (2006) Genetics , vol.172 , pp. 1915-1926
    • González-Martínez, S.C.1    Ersoz, E.2    Brown, G.R.3    Wheeler, N.C.4    Neale, D.B.5
  • 16
    • 10744223698 scopus 로고    scopus 로고
    • Identification of Quantitative Trait Loci influencing wood property traits in loblolly pine (Pinus taeda L.). III. QTL Verification and candidate gene mapping
    • Brown GR, Bassoni DL, Gill GP, Fontana JR, Wheeler NC, et al. (2003) Identification of Quantitative Trait Loci influencing wood property traits in loblolly pine (Pinus taeda L.). III. QTL Verification and candidate gene mapping. Genetics 164: 1537-1546.
    • (2003) Genetics , vol.164 , pp. 1537-1546
    • Brown, G.R.1    Bassoni, D.L.2    Gill, G.P.3    Fontana, J.R.4    Wheeler, N.C.5
  • 18
    • 0345868873 scopus 로고    scopus 로고
    • Differential expression of pine and Cronartium quercuum f. sp. fusiforme genes in fusiform rust galls
    • Warren JM, Covert SF (2004) Differential expression of pine and Cronartium quercuum f. sp. fusiforme genes in fusiform rust galls. Applied and Environmental Microbiology 70: 441-451.
    • (2004) Applied and Environmental Microbiology , vol.70 , pp. 441-451
    • Warren, J.M.1    Covert, S.F.2
  • 19
    • 33750351287 scopus 로고    scopus 로고
    • Differential gene expression in loblolly pine (Pinus taeda L.) challenged with the fusiform rust fungus, Cronartium quercuum f.sp. fusiforme
    • Myburg H, Morse AM, Amerson HV, Kubisiak TL, Huber D, et al. (2006) Differential gene expression in loblolly pine (Pinus taeda L.) challenged with the fusiform rust fungus, Cronartium quercuum f.sp. fusiforme. Physiological and Molecular Plant Pathology 68: 79-91.
    • (2006) Physiological and Molecular Plant Pathology , vol.68 , pp. 79-91
    • Myburg, H.1    Morse, A.M.2    Amerson, H.V.3    Kubisiak, T.L.4    Huber, D.5
  • 20
    • 6044268820 scopus 로고    scopus 로고
    • A sequence mutation in the cinnamyl alcohol dehydrogenase gene associated with altered lignification in loblolly pine
    • Gill GP, Brown GR, Neale DB (2003) A sequence mutation in the cinnamyl alcohol dehydrogenase gene associated with altered lignification in loblolly pine. Plant Biotechnol J 1: 253-258.
    • (2003) Plant Biotechnol J , vol.1 , pp. 253-258
    • Gill, G.P.1    Brown, G.R.2    Neale, D.B.3
  • 21
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • Ewing B, Green P (1998) Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 8: 186-194.
    • (1998) Genome Res , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 22
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing B, Hillier L, Wendl MC, Green P (1998) Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 8: 175-85.
    • (1998) Genome Res , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 23
    • 0031955116 scopus 로고    scopus 로고
    • Consed: A graphical tool for sequence finishing
    • Gordon D, Abajian C, Green P (1998) Consed: a graphical tool for sequence finishing. Genome Res 8: 195-202.
    • (1998) Genome Res , vol.8 , pp. 195-202
    • Gordon, D.1    Abajian, C.2    Green, P.3
  • 24
    • 57349107224 scopus 로고    scopus 로고
    • Highthroughput genotyping and mapping of single nucleotide polymorphisms in loblolly pine (Pinus taeda L.)
    • Eckert AJ, Pande B, Ersoz ES, Wright MH, Rashbrook VK, et al. (2009) Highthroughput genotyping and mapping of single nucleotide polymorphisms in loblolly pine (Pinus taeda L.). Tree Genetics and Genomes 5: 225-234.
    • (2009) Tree Genetics and Genomes , vol.5 , pp. 225-234
    • Eckert, A.J.1    Pande, B.2    Ersoz, E.S.3    Wright, M.H.4    Rashbrook, V.K.5
  • 25
    • 0016491430 scopus 로고
    • On the number of segregating sites in genetical models without recombination
    • Watterson GA (1975) On the number of segregating sites in genetical models without recombination. Theoretical Population Biology 7: 256-276.
    • (1975) Theoretical Population Biology , vol.7 , pp. 256-276
    • Watterson, G.A.1
  • 26
    • 0036184745 scopus 로고    scopus 로고
    • Generating samples under a Wright-Fisher neutral model of genetic variation
    • Hudson RR (2002) Generating samples under a Wright-Fisher neutral model of genetic variation. Bioinformatics 18: 337-338.
    • (2002) Bioinformatics , vol.18 , pp. 337-338
    • Hudson, R.R.1
  • 27
    • 0036199914 scopus 로고    scopus 로고
    • A coalescent-based method for detecting and estimating recombination from gene sequences
    • McVean G, Awadalla P, Fearnhead P (2002) A coalescent-based method for detecting and estimating recombination from gene sequences. Genetics 160: 1231-1241.
    • (2002) Genetics , vol.160 , pp. 1231-1241
    • McVean, G.1    Awadalla, P.2    Fearnhead, P.3
  • 29
    • 0033060534 scopus 로고    scopus 로고
    • Allozyme diversity of selected and natural loblolly pine populations
    • Schmidtling RC, Carroll E, Lafarge T (1999) Allozyme diversity of selected and natural loblolly pine populations. Silvae Genetica 48: 35-45.
    • (1999) Silvae Genetica , vol.48 , pp. 35-45
    • Schmidtling, R.C.1    Carroll, E.2    Lafarge, T.3
  • 30
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima F (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 31
    • 0027453041 scopus 로고
    • Statistical tests of neutrality of mutations
    • Fu YX, Li WH (1993) Statistical tests of neutrality of mutations. Genetics 133: 693-709.
    • (1993) Genetics , vol.133 , pp. 693-709
    • Fu, Y.X.1    Li, W.H.2
  • 32
    • 0026428610 scopus 로고
    • Adaptive protein evolution at the Adh locus in Drosophila
    • McDonald JH, Kreitman M (1991) Adaptive protein evolution at the Adh locus in Drosophila. Nature 351: 652-654.
    • (1991) Nature , vol.351 , pp. 652-654
    • McDonald, J.H.1    Kreitman, M.2
  • 34
    • 0031018637 scopus 로고    scopus 로고
    • Estimating ancestral population parameters
    • Wakeley J, Hey J (1997) Estimating ancestral population parameters. Genetics 145: 847-855.
    • (1997) Genetics , vol.145 , pp. 847-855
    • Wakeley, J.1    Hey, J.2
  • 35
    • 0016220238 scopus 로고
    • The hitch-hiking effect of a favourable gene
    • Smith JM, Haigh J (1974) The hitch-hiking effect of a favourable gene. Genet Res 23: 23-35.
    • (1974) Genet Res , vol.23 , pp. 23-35
    • Smith, J.M.1    Haigh, J.2
  • 36
    • 0033927343 scopus 로고    scopus 로고
    • Joint effects of genetic hitchhiking and background selection on neutral variation
    • Kim Y, Stephan W (2000) Joint effects of genetic hitchhiking and background selection on neutral variation. Genetics 155: 1415-1427.
    • (2000) Genetics , vol.155 , pp. 1415-1427
    • Kim, Y.1    Stephan, W.2
  • 37
    • 33846518736 scopus 로고    scopus 로고
    • Nearly identical paralogs (NIPs): Implications for maize (Zea mays L.) genome evolution
    • Emrich SJ, Li L, Wen TJ, Yandeau-Nelson MD, Fu Y, et al. (2007) Nearly identical paralogs (NIPs): implications for maize (Zea mays L.) genome evolution. Genetics 175: 429-439.
    • (2007) Genetics , vol.175 , pp. 429-439
    • Emrich, S.J.1    Li, L.2    Wen, T.J.3    Yandeau-Nelson, M.D.4    Fu, Y.5
  • 39
    • 37249019973 scopus 로고    scopus 로고
    • Demographic history has influenced nucleotide diversity in European Pinus sylvestris populations
    • Pyhäjärvi T, Garcia-Gil MR, Knürr T, Mikkonen M, Wachowiak W, et al. (2007) Demographic history has influenced nucleotide diversity in European Pinus sylvestris populations. Genetics 177: 1713-1724.
    • (2007) Genetics , vol.177 , pp. 1713-1724
    • Pyhäjärvi, T.1    Garcia-Gil, M.R.2    Knürr, T.3    Mikkonen, M.4    Wachowiak, W.5


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