Characterization and transferability of class 1 integrons in commensal bacteria isolated from farm and nonfarm environments

Foodborne Pathogens and Disease

Volumn 7, Issue 12, 2010, Pages 1441-1451

  Yang, Hua ^a   Byelashov, Oleksandr A ^a   Geornaras, Ifigenia ^a   Goodridge, Lawrence D ^a   Nightingale, Kendra K ^a   Belk, Keith E ^a   Smith, Gary C ^a   Sofos, John N ^a  

^a Department of Environmental and Radiological Health Sciences   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTIC AGENT; ANTIINFECTIVE AGENT; SPECTINOMYCIN; STREPTOMYCIN; TETRACYCLINE;

AGRICULTURE; ANTIBIOTIC RESISTANCE; ANTIBIOTIC SENSITIVITY; ARTICLE; BACTERIUM ISOLATE; BEEF; CATTLE; COMMENSAL; COMPOST; DAIRYING; ENTEROBACTERIACEAE; ESCHERICHIA COLI; FARMING SYSTEM; FECES ANALYSIS; GENE CASSETTE; IN VITRO STUDY; INTEGRON; MANURE; MATING; METHODOLOGY; NONHUMAN; PRIORITY JOURNAL; RESERVOIR;

ANIMALS; ANTI-BACTERIAL AGENTS; BACTERIA; CATTLE; CEPHALOSPORINS; DNA, BACTERIAL; DOGS; DRUG RESISTANCE, MULTIPLE, BACTERIAL; ENVIRONMENTAL MICROBIOLOGY; ESCHERICHIA COLI O157; FECES; INTEGRONS; MICROBIAL SENSITIVITY TESTS; SOIL MICROBIOLOGY; TETRACYCLINE; TETRACYCLINE RESISTANCE;

BOS; CANIS FAMILIARIS; ENTEROBACTERIACEAE; ESCHERICHIA COLI;

EID: 78650036226     PISSN: 15353141     EISSN: None     Source Type: Journal    
DOI: 10.1089/fpd.2010.0555     Document Type: Article

References (36)

1. Agerso Y and Sandvang D. Class 1 integrons and tetracycline resistance genes in Alcaligenes, Arthrobacter, and Pseudomonas spp. isolated from pigsties and manured soil. Appl Environ Microbiol 2005;71:7941-7947.
2. Baker-Austin C, McArthur JV, Lindell AH, et al. Multi-site analysis reveals widespread antibiotic resistance in the marine pathogen Vibrio vulnificus. Microb Ecol 2009;57:151-159.
3. Chang YC, Shih DY, Wang JY, et al. Molecular characterization of class 1 integrons and antimicrobial resistance in Aeromonas strains from foodborne outbreak-suspect samples and environmental sources in Taiwan. Diagn Microbiol Infect Dis 2007;59:191-197.
4. Chen S, Zhao S, White DG, et al. Characterization of multiple- antimicrobial-resistant Salmonella serovars isolated from retail meats. Appl Environ Microbiol 2004;70:1-7.
5. [CLSI] Clinical Laboratory Standard Institute. Methods for Dilution Antimicrobial Susceptibility Tests for Bacteria that Grow Aerobically. Approved Standard M7-A5. Wayne, PA: NCCLS, 2000.
6. [CLSI] Clinical Laboratory Standard Institute. Performance Standards for Antimicrobial Disk and Dilution Susceptibility Tests for Bacteria Isolated from Animals. Approved Standard M31-A2. Wayne, PA: NCCLS, 2002.
7. Douris A, Fedorka-Cray PJ, and Jackson CR. Detection of plas-mids and class 1 integrons in Salmonella enterica serovar agona isolated from NARMS slaughter samples collected in the years 1997-2003. Microb Drug Resist 2007;13:212-219.
8. Elsaied H, Stokes HW, Nakamura T, et al. Novel and diverse integron integrase genes and integron-like gene cassettes are prevalent in deep-sea hydrothermal vents. Environ Microbiol 2007;9:2298-2312.
9. Esiobu N, Armenta, L, and Ike J. Antibiotic resistance in soil and water environments. Int J Environ Health Res 2002;12: 133-144.
10. Gaze WH, Abdouslam N, Hawkey PM, et al. Incidence of class 1 integrons in a quaternary ammonium compound-polluted environment. Antimicrob Agents Chemother 2005;49:1802-1807.
11. Gebreyes WA and Thakur S. Multidrug-resistant Salmonella en-terica serovar Muenchen from pigs and humans and potential interserovar transfer of antimicrobial resistance. Antimicrob Agents Chemother 2005;49:503-511.
12. Ghosh S and LaPara TM. The effects of subtherapeutic antibiotic use in farm animals on the proliferation and persistence of antibiotic resistance among soil bacteria. ISME J 2007;1: 191-203.
13. Gillings M, Boucher Y, Labbate M, et al. The evolution of class 1 integrons and the rise of antibiotic resistance. J Bacteriol 2008;190:5095-5100.
14. Hall UM and Collis CM. Mobile gene cassettes and integrons: capture and spread of genes by site-specific recombination. Mol Microbiol 1995;15:593-600.
15. Hardwick SA, Stokes HW, Findlay S, et al. Quantification of class 1 integron abundance in natural environments using real-time quantitative PCR. FEMS Microbiol Lett 2008;278:207-212.
16. Janda JM and Abbott SL. 16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: pluses, perils, and pitfalls. J Clin Microbiol 2007;45:2761-2764.
17. Jiang X, Yang H, Dettman B, et al. Analysis of fecal microbial flora for antibiotic resistance in ceftiofur-treated calves. Foodborne Pathog Dis 2006;3:355-365.
18. Labbate M, Chowdhury PR, and Stokes HW. A class 1 integron present in a human commensal has a hybrid transposition module compared to Tn402: evidence of interaction with mobile DNA from natural environments. J Bacteriol 2008;190: 5318-5327.
19. Marshall BM, Ochieng DJ, and Levy SB. Commensals: underappreciated reservoir of antibiotic resistance. Microbe 2009;4: 231-238.
20. Moura A, Henriques I, Ribeiro R, et al. Prevalence and characterization of integrons from bacteria isolated from a slaughterhouse wastewater treatment plant. J Antimicrob Chemother 2007;60:1243-1250.
21. Nagachinta S and Chen J. Transfer of class 1 integron-mediated antibiotic resistance genes from Shiga toxin-producing Escherichia coli to a susceptible E. coli K-12 strain in storm water and bovine feces. Appl Environ Microbiol 2008;74:5063-5067.
22. Nandi S, Maurer JJ, Hofacre C, et al. Gram positive bacteria are a major reservoir of class 1 antibiotic resistance integrons in poultry litter. Proc Natl Acad Sci USA 2004;101:7118-7122.
23. Noah CW, Shaw CI, Ikeda JS, et al. Development of green fluorescent protein-expressing bacterial strains and evaluation for potential use as positive controls in sample analyses. J Food Prot 2005;68:680-686.
24. Pan JC, Ye R, Meng DM, et al. Molecular characteristics of class 1 and class 2 integrons and their relationships to antibiotic resistance in clinical isolates of Shigella sonnei and Shigella flexneri. J Antimicrob Chemother 2006;58:288-296.
25. Partridge SR, Tsafnat G, Coiera E, et al. Gene cassettes and cassette arrays in mobile resistance integrons. FEMS Microbiol Rev 2009;33:757-784.
26. Pei R, Kim SC, Carlson KH, et al. Effect of river landscape on the sediment concentrations of antibiotics and corresponding antibiotic resistance genes (ARG). Water Res 2006;40:2427-2435.
27. Roe MT, Vega E, and Pillai SD. Antimicrobial resistance markers of class 1 and class 2 integron-bearing Escherichia coli from irrigation water and associated sediments. Emerg Infect Dis 2003;9:822-826.
28. Rosser SJ and Young HK. Identification and characterization of class 1 integrons in bacteria from an aquatic environment. J Antimicrob Chemother 1999;44:11-18.
29. Schlüter A, Szczepanowski R, Pühler A, et al. Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene pool. FEMS Microbiol Rev 2007;31:449-477.
30. Scott L, McGee P, Walsh C, et al. Detection of numerous ver-otoxigenic E. coli serotypes, with multiple antibiotic resistance from cattle faeces and soil. Vet Microbiol 2009;134:288-293.
31. Smith JL, Drum DJ, Dai Y, et al. Impact of antimicrobial usage on antimicrobial resistance in commensal Escherichia coli strains colonizing broiler chickens. Appl Environ Microbiol 2007;73: 1404-1414.
32. Srinivasan V, Nam HM, Sawant AA, et al. Distribution of tet-racycline and streptomycin resistance genes and class 1 in-tegrons in Enterobacteriaceae isolated from dairy and nondairy farm soils. Microb Ecol 2008;55:184-193.
33. Stokes HW, Nesbo CL, Holley M, et al. Class 1 integrons potentially predating the association with Tn402-like transposition genes are present in a sediment microbial community. J Bacteriol 2006;188:5722-5730.
34. Whichard JM, Joyce K, Fey PD, et al. Beta-lactam resistance and Enterobacteriaceae, United States. Emerg Infect Dis 2005;11: 1464-1466.
35. Yang H, Dettman B, Beam J, et al. Occurrence of ceftriaxone-resistant commensal bacteria on a dairy farm and a poultry farm. Can J Microbiol 2006;52:942-950.
36. Zhao S, White DG, Ge B, Ayers S, et al. Identification and characterization of integron-mediated antibiotic resistance among Shiga toxin-producing Escherichia coli isolates. Appl Environ Microbiol 2001;67:1558-1564.