Variability in the 2′-5′-oligoadenylate synthetase gene cluster is associated with human predisposition to tick-borne encephalitis virus-induced disease

Journal of Infectious Diseases

Volumn 202, Issue 12, 2010, Pages 1813-1818

  Barkhash, Andrey V ^a,d   Perelygin, Andrey A ^d   Babenko, Vladimir N ^a   Myasnikova, Natalia G ^c   Pilipenko, Pavel I ^c   Romaschenko, Aida G ^a   Voevoda, Mikhail I ^a,b   Brinton, Margo A ^d  

^a INSTITUTE OF CYTOLOGY AND GENETICS   (Russian Federation)

^b INSTITUTE OF PHYSIOLOGY   (Russian Federation)

^c NOVOSIBIRSK STATE MEDICAL UNIVERSITY   (Russian Federation)

^d GEORGIA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

2',5' OLIGOADENYLATE SYNTHETASE;

ALLELISM; ARTICLE; CONTROLLED STUDY; DISEASE PREDISPOSITION; GENE CLUSTER; GENE FREQUENCY; GENETIC VARIABILITY; GENOTYPE; HAPLOTYPE; HUMAN; HUMAN TISSUE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RUSSIAN FEDERATION; SINGLE NUCLEOTIDE POLYMORPHISM; TICK BORNE ENCEPHALITIS; TICK BORNE ENCEPHALITIS FLAVIVIRUS; GENETIC PREDISPOSITION; GENETICS; IMMUNOLOGY; MULTIGENE FAMILY;

2',5'-OLIGOADENYLATE SYNTHETASE; ENCEPHALITIS VIRUSES, TICK-BORNE; ENCEPHALITIS, TICK-BORNE; GENE FREQUENCY; GENETIC PREDISPOSITION TO DISEASE; HUMANS; MULTIGENE FAMILY; POLYMORPHISM, SINGLE NUCLEOTIDE; RUSSIA;

EID: 78649996032     PISSN: 00221899     EISSN: None     Source Type: Journal    
DOI: 10.1086/657418     Document Type: Article

References (16)

1. Gritsun TS, Lashkevich VA, Gould EA. Tick-borne encephalitis. Antiviral Res 2003; 57:129-146.
2. Ierusalimsky AP. Tick-borne encephalitis: manual for physicians [in Russian]. Novosibirsk, Russia: State Medical Academy Publishers, 2001.
3. Kindberg E, Mickiene A, Ax C, et al. A deletion in the chemokine receptor 5 (CCR5) gene is associated with tickborne encephalitis. J Infect Dis 2008; 197:266-269.
4. Justesen J, Hartmann R, Kjeldgaard NO. Gene structure and function of the 2′-5′-oligoadenylate synthetase family. Cell Mol Life Sci 2000; 57:1593-1612.
5. Hovanessian AG, Justesen J. The human 2′-5′oligoadenylate synthetase family: unique interferon-inducible enzymes catalyzing 2′-5′ instead of 3′-5′ phosphodiester bond formation. Biochimie 2007; 89:779-788.
6. Perelygin AA, Scherbik SV, Zhulin IB, Stockman BM, Li Y, Brinton MA. Positional cloning of the murine flavivirus resistance gene. Proc Natl Acad Sci U S A 2002; 99:9322-9327.
7. Scherbik SV, Paranjape JM, Stockman BM, Silverman RH, Brinton MA. RNase L plays a role in the antiviral response to West Nile virus. J Virol 2006; 80:2987-2999.
8. Barkhash AV, Kobzev VF, Pilipenko PI, et al. Possible association of the polymorphisms in interferon-induced OAS1, OAS3, EIF2AK2 and RNASEL genes with severity of tick-borne encephalitis in humans [in Russian]. Herald Vavilov Soc Genet Breed Sci 2006; 10:565-571.
9. Sambrook J, Fritsch EF, Maniatis T. Molecular cloning: a laboratory manual. 2nd ed. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press, 1989.
10. Neff MM, Turk E, Kalishman M. Web-based primer design for single nucleotide polymorphism analysis. Trends Genet 2002; 18:613-615.
11. Excoffier L, Laval G, Schneider S. Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evol Bioinform Online 2005; 1:47-50
12. Slatkin M, Excoffier L. Testing for linkage disequilibrium in genotypic data using the expectation-maximization algorithm. Heredity 1996; 76: 377-383.
13. Brehin AC, Casademont I, Frenkiel MP, Jucier C, Sakuntabhai A, Despres P. The large form of human 2′,-5′-oligoadenylate synthetase (OAS3) exerts antiviral effect against chikungunya virus. Virology 2009; 384: 216-222.
14. Lin RJ, Yu HP, Chang BL, Tang WC, Liao CL, Lin YL. Distinct antiviral roles for human 2′,-5′-oligoadenylate synthetase family members against dengue virus infection. J Immunol 2009; 183:8035-8043.
15. Lim JK, Lisco A, McDermott DH, et al. Genetic variation in OAS1 is a risk factor for initial infection with West Nile virus in man. PLoS Pathog 2009; 5:e1000321.
16. Knapp S, Yee LJ, Frodsham AJ, et al. Polymorphisms in interferoninduced genes and the outcome of hepatitis C virus infection: roles of MxA, OAS-1 and PKR. Genes Immun 2003; 4:411-419.