Hydrophilic polymer matrices in optical array sensing

Current Opinion in Chemical Biology

Volumn 14, Issue 6, 2010, Pages 693-704

  Anzenbacher, Pavel ^a   Liu, Yuan li ^a   Kozelkova, Maria E ^a  

^a BOWLING GREEN STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

POLYMER;

CHEMICAL ANALYSIS; HYDROGEL; HYDROPHILICITY; MOLECULAR SENSOR; REVIEW;

HUMANS; HYDROGELS; HYDROPHOBIC AND HYDROPHILIC INTERACTIONS; MICROCHIP ANALYTICAL PROCEDURES; POLYMERS;

EID: 78649883383     PISSN: 13675931     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cbpa.2010.08.011     Document Type: Review

References (75)

1. Ferrer G.G., Paradas M.M., Ribelles J.L.G., Sanchez M.S. Thermodynamical analysis of the hydrogel state in poly(2-hydroxyethyl acrylate). Polymer 2004, 45:6207-6217.
2. Bouwstra J.A., Salomons-de Vries M.A., van Miltenburg J.C. The thermal behavior of water in hydrogels. Thermochim Acta 1995, 248:319-327.
3. Xu L., Li X., Zhai M., Huang L., Peng J., Li J., Wei G. Ion-specific swelling of poly(styrene sulfonic acid) hydrogel. J Phys Chem B 2007, 111:3391-3397.
4. Molecular Recognition and Polymers 2008, Wiley. V. Rotello, S. Thayumanavan (Eds.).
5. Geckeler K.E. Advanced Macromolecular and Supramolecular Materials and Processes 2003, Springer.
6. Basu A. Colorimetric sensing and biosensing using functionalized conjugated polymers. Molecular Recognition and Polymers 2008, 309-334. Wiley. V. Rotello, S. Thayumanavan (Eds.).
7. Nishiyabu R., Palacios M.A., Dehaen W., Anzenbacher P. Synthesis, structure, anion binding, and sensing by calix[4]pyrrole isomers. J Am Chem Soc 2006, 128:11496-11504.
8. Anzenbacher P., Jursíková K., Aldakov D., Marquez M., Pohl R. Materials chemistry approach to anion-sensor design. Tetrahedron 2004, 60:11163-11168.
9. Aldakov D., Anzenbacher P. Sensing of aqueous phosphates by polymers with dual modes of signal transduction. J Am Chem Soc 2004, 126:4752-4753.
10. Optical Sensors: Industrial, Environmental, and Diagnostic Applications. Springer Series on Chemical Sensors and Biosensors 2004, Springer. R. Narayanaswamy, O.S. Wolfbeis (Eds.).
11. McDonagh C., Burke C.S., MacGraith B.D. Optical chemical sensors. Chem Rev 2008, 108:400-422.
12. Borisov S.M., Wolfbeis O.S. Optical Biosens Chem Rev 2008, 108:423-461.
13. LaFratta C.N., Walt D.R. Very high density sensing arrays. Chem Rev 2008, 108:614-637.
14. Potyrailo R.A., Mirsky V.M. Combinatorial and high-throughput development of sensing materials: the first 10 years. Chem Rev 2008, 108:770-813.
15. Thomas S., Joly G., Swager T. Chemical sensors based on amplifying fluorescent conjugated polymers. Chem Rev 2007, 107:1339-1386.
16. Wu X., Shimizu K.D. Molecular imprinting for sensor applications. Molecular Recognition and Polymers 2008, 395-429. Wiley. V. Rotello, S. Thayumanavan (Eds.).
17. Molecularly Imprinted Materials: Science and Technology 2005, Marcel Dekker. M. Yan, O. Ramström (Eds.).
18. Haupt K., Moshbach K. Molecularly imprinted polymers and their use in biomimetic sensors. Chem Rev 2000, 100:2495-2504.
19. Tamaru S., Yamaguchi S., Hamachi I. Simple and practical semi-wet protein/peptide array utilizing a micelle-mixed agarose hydrogel. Chem Lett 2005, 34:294-295.
20. Holtz J.H., Asher S.A. Polymerized colloidal crystal hydrogel films as intelligent chemical sensing materials. Nature 1997, 389:829-832.
21. Ma W.M.J., Pereira M.M.P., D'Hooge F., van den Elsen J.M.H., Cox J.P.L., James T.D., Fossey J.S. Dye displacement assay for saccharide detection with boronate hydrogels. Chem Commun 2009, 5:532-534.
22. Bonanno L., DeLoise L. Integration of a chemical-responsive hydrogel into a porous silicon photonic sensor for visual colorimetric readout. Adv Funct Mater 2010, 20:573-578.
23. Suri J., Cordes D., Cappuccio F., Wessling R., Singaram B. Continuous glucose sensing with a fluorescent thin-film hydrogel. Angew Chem Int Ed 2003, 42:5857-5859.
24. Cappuccio F., Suri J., Cordes D., Wessling R., Singaram B. Evaluation of pyranine derivatives in boronic acid based saccharide sensing: significance of charge interaction between dye and quencher in solution and hydrogel. J Fluoresc 2004, 14:521-533.
25. Cathell M., Szewczyk J., Bui F., Weber C., Wolever J., Kang J., Schauer C. Structurally colored thiol chitosan thin films as a platform for aqueous heavy metal ion detection. Biomacromolecules 2008, 9:289-295.
26. Lee N., Jung Y., Park H. On-chip colorimetric biosensor based on polydiacetylene (PDA) embedded in photopolymerized poly(ethylene glycol) diacrylate (PEG-DA) hydrogel. Biochem Eng J 2006, 29:103-108.
27. Yoshimura I., Miyahara Y., Kasagi N., Yamane H., Ojido A., Hamachi I. Molecular recognition in a supramolecular hydrogel to afford a semi-wet sensor chip. J Am Chem Soc 2004, 126:12204-12205.
28. Yamaguchi S., Yoshimura I., Kohira T., Tamaru S., Hamachi I. Cooperation between artificial receptors and supramolecular hydrogels for sensing and discriminating phosphate derivatives. J Am Chem Soc 2005, 127:11835-11841.
29. Arimori S., Bell M., Oh C., Frimat K., James T. Modular fluorescence sensors for saccharides. Chem Commun 2001, 1836-1837.
30. Raymo F., Cejas M. Supramolecular association of dopamine with immobilized fluorescent probes. Org Lett 2002, 4:3183-3185.
31. Boal A., Rotello V. Fabrication and self-optimization of multivalent receptors on nanoparticle scaffolds. J Am Chem Soc 2000, 122:734-735.
32. Simpson T., Revell D., Cook M., Russell D. Evanescent wave excited fluorescence from self-assembled phthalocyanine monolayers. Langmuir 1997, 13:460-464.
33. Sasaki D., Kurihara K., Kunitake T. Self-assembled multifunctional receptors for nucleotides at the air-water interface. J Am Chem Soc 1992, 114:10994-10995.
34. Eberhard M., Erne P. Calcium binding to fluorescent calcium indicators: calcium green, calcium orange and calcium crimson. Biochem Biophys Res Commun 1991, 180:209-215.
35. Whitaker J., Haugland R., Prendergast F. Spectral and photophysical studies of benzo[c]xanthene dyes: dual emission pH sensors. Anal Biochem 1991, 194:330-344.
36. Ojida A., Mito-oka Y., Inoue M., Hamachi I. First artificial receptors and chemosensors toward phosphorylated peptide in aqueous solution. J Am Chem Soc 2002, 124:6256-6258.
37. Ojida A., Mito-oka Y., Sada K., Hamachi I. Molecular recognition and fluorescence sensing of monophosphorylated peptides in aqueous solution by bis(zinc(II)-dipicolylamine)-based artificial receptors. J Am Chem Soc 2004, 126:2454-2463.
38. Principles of Fluorescence Spectroscopy 2006, Springer, New York. J.R. Lakowicz (Ed.).
39. Yoon B., Lee S., Kim J. Recent conceptual and technological advances in polydiacetylene-based supramolecular chemosensors. Chem Soc Rev 2009, 38:1958-1968.
40. Ahn D., Kim J. Fluorogenic polydiacetylene supramolecules: immobilization. micropatterning, and application to label-free chemosensors. Acc Chem Res 2008, 41:805-816.
41. Jelinek R., Kolusheva S. Biomolecular sensing with colorimetric vesicles. Top Curr Chem 2007, 277:155-180.
42. Reppy M, Pindzola B: Solid supported polydiacetylene materials for detection of biological targets: new material forms and detection examples. ACS Symposium Series (Nanoscience and Nanotechnology for Chemical and Biological Defense); 2009, 1016:169-183.
43. dos Santos Pires A., Soares N., Mendes da Silva L., de Andrade N., Silveira M., Fernandes de Carvalho A. Polydiacetylene as a biosensor: fundamentals and applications in the food industry. Food Bioprocess Technol 2010, 3:172-181.
44. Kim J., Chae S., Lee Y., Lee J., Lee G., Kim T., Ahn D. Polydiacetylene supramolecules embedded in PVA film for strip-type chemosensors. Chem Lett 2006, 35:560-561.
45. Sarkar A., Kaganove S., Dvornic P., Satoh P. Colorimetric biosensors based on polydiacetylene (PDA) and polyamidoamine (PAMAM) dendrimers. Polym News 2005, 30:370-377.
46. Meir D., Silbert L., Volinsky R., Kolusheva S., Weiser I., Jelinek R. Colorimetric/fluorescent bacterial sensing by agarose-embedded lipid/polydiacetylene films. J Appl Microbiol 2008, 104:787-795.
47. Silbert L., Ben Slush I., Israel E., Porgador A., Kolusheva S., Jelinek R. Rapid chromatic detection of bacteria by use of a new biomimetic polymer sensor. App Environ Microbiol 2006, 72:7339-7344.
48. Scindia Y., Silbert L., Volinsky R., Kolusheva S., Jelinek R. Colorimetric detection and fingerprinting of bacteria by glass-supported lipid/polydiacetylene films. Langmuir 2007, 23:4682-4687.
49. Schiller A., Wessling R., Singaram B. A fluorescent sensor array for saccharides based on boronic acid appended bipyridinium salts. Angew Chem Int Ed 2007, 46:6457-6459.
50. Thete A., Henkel T., Goeckeritz R., Endlich M., Koehler J., Gross G. A hydrogel based fluorescent micro array used for the characterization of liquid analytes. Anal Chim Acta 2009, 633:81-89.
51. Zourob M., Gough J., Ulijn R. A micropatterned hydrogel platform for chemical synthesis and biological analysis. Adv Mater 2006, 18:655-659.
52. Derwinska K., Gheber L., Sauer U., Schorn L., Preininger C. Effect of surface parameters on the performance of IgG-arrayed hydrogel chips: a comprehensive study. Langmuir 2007, 23:10551-10558.
53. Palacios M., Nishiyabu R., Marquez M., Anzenbacher P. Supramolecular chemistry approach to the design of a high-resolution sensor array for multianion detection in water. J Am Chem Soc 2007, 129:7538-7544.
54. Gale P., Sessler J., Král V., Lynch V. Calix[4]pyrroles: old yet new anion-binding agents. J Am Chem Soc 1996, 118:5140-5141.
55. Gale P., Anzenbacher P., Sessler J. Calixpyrroles II. Coord Chem Rev 2001, 222:57-102.
56. Nishiyabu R., Anzenbacher P. Sensing of antipyretic carboxylates by simple chromogenic calix[4]pyrroles. J Am Chem Soc 2005, 127:8270-8271.
57. Nishiyabu R., Anzenbacher P. 1,3-Indane-based chromogenic calixpyrroles with push-pull chromophores: synthesis and anion sensing. Org Lett 2006, 8:359-362.
58. Zyryanov G.V., Palacios M., Anzenbacher P. Rational design of a fluorescence-turn-on sensor array for phosphates in blood serum. Angew Chem Int Ed 2007, 46:7849-7852.
59. Human Physiology 1989, Springer-Verlag, Berlin. R.F. Schmidt, G. Thews (Eds.).
60. Chemometrics. A Practical Guide 1998, Wiley & Sons, New York. K.R. Beebe, R.J. Pell, M.B. Seasholtz (Eds.).
61. Oxine and Its Derivatives. Vol. I-IV 1954-1956, Buttersworth, London. R.G.W. Hollingshead (Ed.).
62. Topics in Fluorescence Spectroscopy. Vol. 9 Advanced Concepts in Fluorescence Sensing. Small Molecule Sensing 2005, Springer Science, New York. C.D. Geddes, J.R. Lakowicz (Eds.).
63. Valeur B., Leray I. Design principles of fluorescent molecular sensors for cation recognition. Coord Chem Rev 2000, 205:3-40.
64. 2+. J Am Chem Soc 2003, 125:11458-11459.
65. Royzen M., Durandin A., Young V., Geacintov N., Canary J. A sensitive probe for the detection of Zn(II) by time-resolved fluorescence. J Am Chem Soc 2006, 128:3854-3855.
66. Maruyama S., Kikuchi K., Hirano T., Urano Y., Nagano T. A novel, cell-permeable, fluorescent probe for ratiometric imaging of zinc ion. J Am Chem Soc 2002, 124:10650-10651.
67. Lavigne J., Anslyn E. Sensing a paradigm shift in the field of molecular recognition: from selective to differential receptors. Angew Chem Int Ed 2001, 40:3118-3130.
68. Wright A., Anslyn E. Differential receptor arrays and assays for solution-based molecular recognition. Chem Soc Rev 2006, 35:14-28.
69. Palacios M., Wang Z., Montes V., Zyryanov G., Anzenbacher P. Rational design of a minimal size sensor array for metal ion detection. J Am Chem Soc 2008, 130:10307-10314.
70. Wang Z., Palacios M., Anzenbacher P. Fluorescence sensor array for metal ion detection based on various coordination chemistries: general performance and potential application. Anal Chem 2008, 80:7451-7459.
71. Edwards N., Sager T., McDevitt J., Anslyn E. Boronic acid based peptidic receptors for pattern-based saccharide sensing in neutral aqueous media, an application in real-life samples. J Am Chem Soc 2007, 129:13575-13583.
72. Lavigne J., Anslyn E. Teaching old indicators new tricks: a colorimetric chemosensing ensemble for tartrate/malate in beverages. Angew Chem Int Ed 1999, 38:3666-3669.
73. Suslick B., Feng L., Suslick K. Discrimination of complex mixtures by a colorimetric sensor array: coffee aromas. Anal Chem 2010, 82:2067-2073.
74. Musto C., Lim S., Suslick K. Colorimetric detection and identification of natural and artificial sweeteners. Anal Chem 2009, 81:6526-6533.
75. Liu Y., Palacios M., Anzenbacher P. The power of the weak: recognition of ion pairs in water using a simple array sensor. Chem Commun 2010, 1860-1862.