Using bioinpormcotics methods to develop EST-SSR makers from sheep's ESTs

Journal of Animal and Veterinary Advances

Volumn 9, Issue 21, 2010, Pages 2759-2762

  Zhang, Wenxiang ^a   Wang, Zunbao ^a   Zhao, Zongsheng ^a   Zeng, Xiancun ^a   Wu, Hongbin ^a   Yu, Peng ^a  

^a SHIHEZI UNIVERSITY   (China)

Author keywords

China; EST; Genetic mapping; NCBI; Sheep; SSR

Indexed keywords

EID: 78649773752     PISSN: 16805593     EISSN: 1993601X     Source Type: Journal    
DOI: 10.3923/javaa.2010.2759.2762     Document Type: Article

References (11)

1. Cordeiro, G.M., R. Casu, C.L. Mclntyre, J.M. Manners and R.J. Henry, 2001. Microsatellites markers from sugarcane (Saccharum spp.) ESTs cross transferable to erianthus and sorghum. Plant Sci., 160: 111 5-1123.
2. Ellis, J.R. and J.M. Burke, 2007. EST-SSRs as a resource for population genetic analyses. Heredity, 99: 125-132.
3. Gupta, P.K., S. Rustgi, S. Sharma, R Singh, N. Kumar and H.S. Balayan, 2003. Transferable EST-SSR markers for the study of polymorphism and genetic diversity in bread wheat. Mol. Genet. Genomics, 270: 315-323.
4. Rohrer, G.A., S.C Fahrenkrug, D. Nonneman, N. Tao and W.C. Warren, 2002. Mapping microsatellite markers Identified in porcine EST sequences. Anim. Genet., 33: 372-376.
5. Sambrook, J. andD.W. Russell, 2002. Molecular Cloning: A Laboratory Manual. Science Press, Beijing, pp: 463-470.
6. Scott, K.D., P. Eggler, G. Seaton, M. Rossetto, E.M. Ablett, L.S. Lee and R.J. Henry, 2000. Analysis of SSRs derived from grape ESTs. Theor. Applied Genet., 100: 723-726.
7. Thiel, T., W. Michalek, R.K. Varshney and A. Graner, 2003. Exploiting EST databases for the developpment and characterization of gene-derived SSR-markers in barley. Theor. Applied Genet., 106: 411-422.
8. Varshney, R.K., T. Thiel, N. Stein, P. Langridge and A. Graner, 2002. Insilico analysis on frequency and distribution of microsatellites in ESTs of some cereal species. Cell. Mol. Biol. Lett., 7: 537-546.
9. Yan, Q., Y. Zhang, H. Li, C. Wei, L. Niu, S. Guan, S. Li and L. Du, 2008. Identification of microsatellites in cattle unigenes. J. Genet. Genomics, 35: 261-266.
10. Yin, J., J. Li, Y. Zhang, C. Li andZ. Guo, 2005. Study on gene expression of skin from adult inner mongol la cashmere goat. Acta Vet. Zootechnica Simca, 36: 996-1000.
11. Yue, G.H., M.Y. Ho, L. Orban and H. Komen, 2004. Microsatellites wit hingenes and ESTs of common carp and their applicability in silver crucian carp. Aquaculture, 234: 85-98.