Proteome profile of whole cerebellum of the mature rat

Proteomics

Volumn 10, Issue 23, 2010, Pages 4311-4319

  Maurya, Devendra Kumar ^a   Sundaram, Curam Sreenivasacharlu ^a   Bhargava, Purnima ^a  

^a CENTRE FOR CELLULAR AND MOLECULAR BIOLOGY   (India)

Author keywords

Animal proteomics; Brain; Cerebellum; Rat

Indexed keywords

4 AMINOBUTYRATE AMINOTRANSFERASE; ADENOSYLHOMOCYSTEINASE; ALPHA SYNUCLEIN; BETA SYNUCLEIN; CALBINDIN; COLLAPSIN RESPONSE MEDIATOR PROTEIN; COLLAPSIN RESPONSE MEDIATOR PROTEIN 2; DJ 1 PROTEIN; FATTY ACID BINDING PROTEIN; GLIA MATURATION FACTOR; GLIAL FIBRILLARY ACIDIC PROTEIN; GLUTAMATE AMMONIA LIGASE; GLUTAMATE DEHYDROGENASE; GLYCOGEN PHOSPHORYLASE; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN; N ETHYLMALEIMIDE SENSITIVE FACTOR; PHOSPHATIDYLETHANOLAMINE BINDING PROTEIN; PROTEOME; SEPTIN; SUCCINATE SEMIALDEHYDE DEHYDROGENASE; SYNAPSIN II; SYNAPTOSOMAL ASSOCIATED PROTEIN 25;

AMINO ACID SEQUENCE; ARTICLE; CEREBELLUM; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; RAT; SEQUENCE ANALYSIS;

ANIMALS; CEREBELLUM; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; PROTEOME; RATS; RATS, WISTAR;

ANIMALIA; RATTUS;

EID: 78649668310     PISSN: 16159853     EISSN: 16159861     Source Type: Journal    
DOI: 10.1002/pmic.200900680     Document Type: Article

References (31)

1. Fountoulakis, M., Kossida, S., Proteomics-driven progress in neurodegeneration research. Electrophoresis 2006, 27, 1556-1573.
2. Bhargava, P., Rao, P. S., Vajreshwari, A., Shankar, R., Total gangliosides, ganglioside species and the activity of neuraminidase in different brain regions and spinal cord of normal and undernourished rats. Lipids 1984, 19, 179-186.
3. Boyes, A., Grant, S. G. N., Neuroproteomics: understanding the molecular organization and complexity of the brain. Nat. Rev. Neurosci. 2009, 10, 635-646.
4. Fountoulakis, M., Schuller, E., Hardmeier, R., Berndt, P., Lubec, G., Rat brain proteins: two-dimensional protein database and variations in the expression level. Electrophoresis 1999, 20, 3572-3579.
5. Fountoulakis, M., Hardmaier, R., Schuller, E., Lubec, G., Difference in protein level between neonatal and adult brain. Electrophoresis 2000, 21, 673-678.
6. Krapfenbauer, K., Fountoulakis, M., Lubec, G., A rat brain protein expression map including cytosolic and enriched mitochondrial and microsomal fractions. Electrophoresis 2003, 24, 1847-1870.
7. Yang, J.-W., Czech, T., Lubec, G., Proteomic profiling of human hippocampus. Electrophoresis 2004, 25, 1169-1174.
8. Maurya, D. K., Sundaram, C. S., Bhargava, P., Proteome profile of the mature rat olfactory bulb. Proteomics 2009, 9, 2593-2599.
9. Middleton, F. A., Strick, P. L., The cerebellum: an overview. Trends Neurosci. 1998, 21, 367-369.
10. Desmond, J. E., Fiez, J. A., Neuroimaging studies of the cerebellum: language, learning and memory. Trends Cogn. Sci. 1998, 2, 355-362.
11. Saab, C. Y., Willis, W. D., The cerebellum: organization, functions and its role in nociception. Brain Res. Rev. 2003, 42, 85-95.
12. Ramnani, N., The primate cortico-cerebellar system: anatomy and function. Nat. Rev. Neurosci. 2006, 7, 511-522.
13. Apps, R., Hawkes, R., Cerebellar cortical organization: a one-map hypothesis. Nat. Rev. Neurosci. 2009, 10, 670-681.
14. Ohyama, T., Nores, W. L., Murphy, M., Mauk, M. D., What the cerebellum computes. Trends Neurosci. 2003, 26, 222-227.
15. Glickstein, M., What does the cerebellum really do? Curr. Biol. 2007, 17, R824-R827.
16. Strick, P. L., Dum, R. P., Fiez, J. A., Cerebellum and nonmotor function. Ann Rev. Neurosci. 2009, 32, 413-434.
17. Lee, Y., Katyal, S., Li, Y., El-Khamisy, S. F. et al., The genesis of cerebellar interneurins and the prevention of neural DNA damage require XRCC1. Nat. Neurosci. 2009, 12, 973-980.
18. Biasini, E., Massignan, T., Fioriti, L., Rossi, V. et al., Analysis of the cerebellar proteome in a transgenic mouse model of inherited prion disease reveals preclinical alteration of calcineurin activity. Proteomics 2006, 6, 2823-2834.
19. Schonberger, S. J., Edgar, P. F., Kydd, R., Faull, R. L. M., Cooper, G. J. S., Proteomic analysis of the brain in Alzheimer's disease: Molecular phenotype of a complex disease process. Proteomics 2001, 1, 1519-1528.
20. Watt, A. J., Cuntz, H., Mori, M., Nusser, Z. et al., Traveling waves in developing cerebellar cortex mediated by asymmetrical Purkinje cell connectivity. Nat. Neurosci. 2009, 12, 463-473.
21. McClatchy, D. B., Liao, L., Park, S. K., Venable, J. D. et al., Quantification of the synaptosomal proteome of the rat cerebellum during post-natal development. Genome Res. 2007, 17, 1378-1388.
22. Beranova-Giorgianni, S., Pabst, M. J., Russell, T. M., Giorgianni, F. et al., Preliminary analysiss of the mouse cerebellum proteome. Mol. Brain Res. 2002, 98, 135-140.
23. Taoka, M., Wakamiya, A., Nakayama, H., Isobe, T., Protein profiling of rat cerebella during development. Electrophoresis 2000, 21, 1872-1879.
24. Castegna, A., Aksenov, M., Thongboonkerd, V., Klein, J. B. et al., Proteomic identification of oxidatively modified proteins in Alzheimer's disease brain. Part II: dihydropyrimidinase-related protein 2, α-enolase and heat shock cognate 71. J. Neurochem. 2002, 82, 1524-1532.
25. The UniProt Consortium. The Universal Protein Resource (UniProt). Nucl. Acids Res. 2008, 36, D190-D195.
26. Hawkes, R., Herrup, K., Aldolase C/zebrin II and the regionalization of the cerebellum. J. Mol. Neurosci. 1995, 6, 147-158.
27. Wang, L.-H., Strittmatter, S. M., A family of rat CRMP genes is differentially expressed in the nervous system. J. Neurosci. 1996, 16, 6197-6207.
28. Vignjevic, D., Kojima, S.-I., Aratyn, Y., Danciu, o. et al., Role of fascin in filopodial protrusion. J. Cell Biol. 2006, 174, 863-875.
29. Zuber, M. X., Goodman, D. W., Karns, L. R., Fishman, M. C., The neuronal growth-associated protein GAP-43 induces filopodia in non-neuronal cells. Science 1989, 244, 1193-1195.
30. Feldman, R. E. Jr., Maurer, M. H., Hunzinger, C., Lewicka, S., Buergers, H. F. et al., Reduction in rat phospatidylethanolamine binding protein-1 (PEBP1) after chronic corticosterone treatment may be paralleled by cognitive impairment: a first study. Stress 2008, 11, 134-147.
31. Hou, Q., Gao, X., Zhang, X., Kong, L. et al., SNAP-25 in hippocampal CA1 region is involved in memory consolidation. Eur. J. Neurosci. 2004, 20, 1593-1603.