Thermodynamic descriptors, profiles and driving forces in membrane receptor-ligand interactions

Journal of Receptors and Signal Transduction

Volumn 30, Issue 6, 2010, Pages 454-468

  Pliska, Vladimir ^a  

^a UNIVERSITY OF ZURICH   (Switzerland)

Author keywords

agonism antagonism; enthalpy entropy change; heat capacity change; Membrane coupled receptors; thermodynamic descriptors; thermodynamics ligand receptor interaction

Indexed keywords

LIGAND; MEMBRANE RECEPTOR;

ARTICLE; ENTHALPY; ENTROPY; MACROMOLECULE; MICROCALORIMETRY; MOLECULAR INTERACTION; TEMPERATURE; THERMODYNAMICS;

CALORIMETRY; ENTROPY; HOT TEMPERATURE; LIGANDS; MODELS, THEORETICAL; PROTEIN BINDING; RECEPTORS, CELL SURFACE; THERMODYNAMICS;

EID: 78649652040     PISSN: 10799893     EISSN: 15324281     Source Type: Journal    
DOI: 10.3109/10799893.2010.515594     Document Type: Article

References (49)

1. Rafa RB (ed.). Drug-Receptor Termodynamics: Introduction and Applications. Chichester (UK): John Wiley & Sons Ltd., 2001.
2. Höhne GWH, Hemminger WF, Flammersheim H-J. Diferential Scanning Calorimetry: An Introduction for Practitioners. 2nd ed. Berlin: Springer-Verlag, 2003.
3. Ladbury JE, Chowdhry BZ (eds). Biocalorimetry. Applications of Calorimetry in the Biological Sciences. Chichester (UK): John Wiley & Sons Ltd.,1998.
4. Ladbury JE, Doyle ML (eds). Biocalorimetry 2. Applications of Calorimetry in the Biological Systems. Chichester (UK): John Wiley & Sons Ltd., 2004.
5. Perozzo R, Folkers G, Scapozza L. Termodynamics of protein-lig-and interactions: history, presence, and future aspects. J Recept Signal Transduct Res 2004, 24, 1-52.
6. Wadso I. Microcalorimetry and its application in biological sciences. In Pain RH, Smith BJ, eds. New Techniques in Biophysics and Cell Biology, Vol. 2., New York: John Wiley & Sons Inc., 1975, 85-126.
7. Wiseman T, Williston S, Brandts JF, Lin LN. Rapid measurement of binding constants and heats of binding using a new titration calorimeter. Anal Biochem 1989, 179, 131-137.
8. Tompson JA, Ladbury JE. Isothermal titration calorimetry: A tutorial. In Ladbury JE, Doyle ML, eds. Biocalorimetry 2. Applications of Calorimetry in the Biological Systems. Chichester (UK): John Wiley & Sons Ltd. 2004: 37-58.
9. Sachs L. Applied Statistics. A Handbook of Techniques. New York: Springer Verlag, 1982: 456-461.
10. Draper N, Smith H. Applied Regression Analysis. New York: John Wiley & Sons Inc. 1981: 91-92.
11. Draper N, Smith H. Applied Regression Analysis. New York: John. Wiley & Sons Inc. 1981: 307-310.
12. Wilkinson L. Tests for signifcance in stepwise regression. Psychol Bull 1979, 86, 168-174.
13. Wilkinson L, Coward M. Linear models I: Linear regression. In SYSTAT 12-Statistics I II III IV. San Jose (CA): SYSTAT Software, Inc., 2007: II-39-II-100.
14. Yoo SH, Lewis MS. Termodynamic study of the pH-dependent interaction of chromogranin A with an intraluminal loop peptide of the inositol 1,4,5-trisphosphate receptor. Biochemistry 1995, 34, 632-638.
15. Planck M. Vorlesungen über Termodynamik. Leipzig: Verlag von Veit & Comp., 1905: 217-255.
16. Pliska V. Heat capacity in ligand-receptor interactions. In Rafa RB, ed. Drug-Receptor Termodynamics: Introduction and Applications. Chichester (UK): John Wiley & Sons Ltd., 2001: 163-203.
17. Atkins PW. Physical Chemistry, 3rd ed., Oxford (UK): Oxford University Press, 1988: 85.
18. Hearn RP, Richards FM, Sturtevant JM, Watt GD. Termodynamics of the binding of S-peptide to S-protein to form ribonuclease S. Biochemistry 1971, 10, 806-817.
19. Liu CC, Richard AJ, Datta K, LiCata VJ. Prevalence of temperature-dependent heat capacity changes in protein-DNA interactions. Biophys J 2008, 94, 3258-3265.
20. Fukada H, Sturtevant JM, Quiocho FA. Termodynamics of the binding of L-arabinose and of D-galactose to the L-arabinose-binding protein of Escherichia coli. J Biol Chem 1983, 258, 13193-13198.
21. Ladbury JE, Wright JG, Sturtevant JM, Sigler PB. A thermody-namic study of the trp repressor-operator interaction. J Mol Biol 1994, 238, 669-681.
22. Haq I. Isothermal titration calorimetry in the study of DNA-drug interactions. In Ladbury JE, Chowdhry BZ, eds. Biocalorimetry. Applications of Calorimetry in the Biological Sciences. Chichester (UK): John Wiley & Sons Ltd., 1998: 42-61.
23. Milev S, Bosshard HR, Jelesarov I. Energetics of site-specifc DNA recognition by Integrase Tn916. In Biocalorimetry 2. Applications of Calorimetry in the Biological Systems. Chichester (UK): John Wiley & Sons Ltd., 2004: 189-202.
24. Benzinger TH. Termodynamics, chemical reactions and molecular biology. Nature 1971, 229, 100-102.
25. Edelhoch H, Osborne JC Jr. Te thermodynamic basis of the stability of proteins, nucleic acids, and membranes. Adv Protein Chem 1976, 30, 183-250.
26. Datta K, LiCata VJ. Termodynamics of the binding of Termus aquaticus DNA polymerase to primed-template DNA. Nucleic Acids Res 2003, 31, 5590-5597.
27. 1 adenosine receptor ligands. Mol Neuropharmacol 1992, 2, 273-281.
28. Belleau B, Lavoie JL. A biophysical basis of ligand-induced activation of excitable membranes and associated enzymes. A ther-modynamic study using acetylcholinesterase as a model receptor. Can J Biochem 1968, 46, 1397-1409.
29. Weiland GA, Minneman KP, Molinof PB. Fundamental diference between the molecular interactions of agonists and antagonists with the beta-adrenergic receptor. Nature 1979, 281, 114-117.
30. Contreras ML, Wolfe BB, Molinof PB. Termodynamic properties of agonist interactions with the beta adrenergic receptor-coupled adenylate cyclase system. II. Agonist binding to soluble beta adrenergic receptors. J Pharmacol Exp Ter 1986, 237, 165-172.
31. Kilpatrick GJ, el Tayar N, Van de Waterbeemd H, Jenner P, Testa B, Marsden CD. Te thermodynamics of agonist and antagonist binding to dopamine D-2 receptors. Mol Pharmacol 1986, 30, 226-234.
32. Zahniser NR, Molinof PB. Termodynamic diferences between agonist and antagonist interactions with binding sites for [3H]spiroperidol in rat striatum. Mol Pharmacol 1983, 23, 303-309.
33. Maksay G. Termodynamics of gamma-aminobutyric acid type A receptor binding diferentiate agonists from antagonists. Mol Pharmacol 1994, 46, 386-390.
34. Waelbroeck M, Van Obberghen E, De Meyts P. Termodynamics of the interaction of insulin with its receptor. J Biol Chem 1979, 254, 7736-7740.
35. Borea PA, Varani K, Gessi S, Gilli P, Gilli G. Binding thermodynamics at the human neuronal nicotine receptor. Biochem Pharmacol 1998, 55, 1189-1197.
36. Hitzemann R, Murphy M, Curell J. Opiate receptor thermodynamics: agonist and antagonist binding. Eur J Pharmacol 1985, 108, 171-177.
37. Aune KC, Goldsmith LC, Timashef SN. Dimerization of a-chy-motrypsin. II. Ionoc strength and temperature dependence. Biochemistry 1971, 10, 1609-1617.
38. Massey V. Studies on fumarase. III. Te efect of temperature. Biochem J 1953, 53, 72-79.
39. Massey V. Studies on fumarase. 4. Te efects of inhibitors on fumarase activity. Biochem J 1953, 55, 172-177.
40. Formisano S, Johnson ML, Edelhoch H. Termodynamics of the self-association of glucagon. Proc Natl Acad Sci USA 1977, 74, 3340-3344.
41. Osborne JC Jr, Palumbo G, Brewer HB Jr, Edelhoch H. Te thermodynamics of the self-association of the reduced and car-boxymethylated form of apo-a-II from the human high density lipoprotein complex. Biochemistry 1976, 15, 317-320.
42. Chun PW. Termodynamic molecular switch in macromolecular interactions. Cell Biochem Biophys 2000, 33, 149-169.
43. Chun PW. Application of Planck-Benzinger relationships to biology. Meth Enzymol 1998, 295, 227-268.
44. Pliska V. Termodynamic parameters of ligand-receptor interactions: computation and error margins. J Recept Signal Transduct Res 1997, 17, 495-510.
45. Le Grimellec C, Friedlander G, el Yandouzi EH, Zlatkine P, Giocondi MC. Membrane fuidity and transport properties in epithelia. Kidney Int 1992, 42, 825-836.
46. Mitaku S, Jippo T, Kataoka R. Termodynamic properties of the lipid bilayer transition. Pseudocritical phenomena. Biophys J 1983, 42, 137-144.
47. Quinn PJ. Te fuidity of cell membranes and its regulation. Prog Biophys Mol Biol 1981, 38, 1-104.
48. Belleau B. A molecular theory of drug action based on induced conformational perturbations of receptors. J Med Chem 1964, 7, 776-784.
49. Belleau B. Conformational perturbation in relation to the regulation of enzyme and receptor behaviour. Adv Drug Res 1965, 2, 89-126.