Molecular characterization and comparative transcriptional analysis of LMW-m-type genes from wheat (Triticum aestivum L.) and Aegilops species

Theoretical and Applied Genetics

Volumn 121, Issue 5, 2010, Pages 845-856

  Li, X H ^a   Wang, K ^a   Wang, S L ^a   Gao, L Y ^a   Xie, X X ^a   Hsam, S L K ^b   Zeller, F J ^b   Yan, Y M ^a  

^a CAPITAL NORMAL UNIVERSITY   (China)

^b TECHNICAL UNIVERSITY OF MUNICH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

AEGILOPS; AMINO ACID RESIDUES; BELONG TO; BREAD WHEAT; DEVELOPMENTAL STAGE; EXPRESSION EFFICIENCY; EXPRESSION LEVELS; MOLECULAR CHARACTERIZATION; PHYLOGENETIC ANALYSIS; Q-RT-PCR; QUANTITATIVE REAL TIME PCR; STRUCTURAL FEATURE; TRANSCRIPTIONAL ANALYSIS; TRANSCRIPTIONAL LEVELS; WHEAT (TRITICUM AESTIVUM L.); WILD SPECIES;

AMINO ACIDS; ESCHERICHIA COLI; FOOD PRODUCTS; GRAIN (AGRICULTURAL PRODUCT); POLYMERASE CHAIN REACTION;

GENE EXPRESSION;

GLUTEN; GLUTENIN; MESSENGER RNA; METHIONINE; PROTEIN SUBUNIT;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; COMPARATIVE STUDY; ENDOSPERM; ESCHERICHIA COLI; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MOLECULAR CLONING; MOLECULAR EVOLUTION; MOLECULAR GENETICS; MOLECULAR WEIGHT; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT GENE; POACEAE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE HOMOLOGY; TIME; WHEAT;

AMINO ACID SEQUENCE; CLONING, MOLECULAR; ENDOSPERM; ESCHERICHIA COLI; EVOLUTION, MOLECULAR; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; GLUTENS; METHIONINE; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; PHYLOGENY; POACEAE; PROTEIN SUBUNITS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; SEQUENCE HOMOLOGY, AMINO ACID; TIME FACTORS; TRANSCRIPTION, GENETIC; TRITICUM;

AEGILOPS; ESCHERICHIA COLI; TRITICUM AESTIVUM;

EID: 78649633748     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-010-1354-1     Document Type: Article

References (49)

1. Altenbach SB (1998) Quantification of individual low-molecular-weight glutenin subunit transcripts in developing wheat grains by competitive RT-PCR. Theor Appl Genet 97: 413-421.
2. An X, Zhang Q, Yan Y, Li Q, Zhang Y, Wang A, Pei Y, Tian J, Wang H, Hsam SLK, Zeller FJ (2006) Cloning and molecular characterization of three novel LMW-i glutenin subunit genes from cultivated einkorn (Triticum monococcum L.). Theor Appl Genet 113: 383-395.
3. Anderson OD, Greene FC (1989) The characterization and comparative analysis of high-molecular-weight glutenin genes from genomes A and B of a hexaploid bread wheat. Theor Appl Genet 77: 689-700.
4. Cassidy BG, Dvorak J, Anderson OD (1998) The wheat low-molecular-weight glutenin genes: characterization of six new genes and progress in understanding gene family structure. Theor Appl Genet 96: 743-750.
5. Colot V, Robert LS, Kavanagh TA, Bevan MW, Thompson RD (1987) Localization of sequences in wheat endosperm protein genes which confer tissue-specific expression in tobacco. EMBO J 6: 3559-3564.
6. D'Ovidio R, Masci S (2004) The low-molecular-weight glutenin subunits of wheat gluten. J Cereal Sci 39: 321-339.
7. D'Ovidio R, Marchitelli C, Ercoli Cardelli L, Porceddu E (1999) Sequence similarity between allelic Glu-B3 genes related to quality properties of durum wheat. Theor Appl Genet 98: 455-461.
8. Fernandez-Calvin B, Orellana (1990) High molecular weight glutenin subunit variation in the Sitopsis section of Aegilops. Implications for the origin of the B genome of wheat. Heredity 65: 455-463.
9. Gachon C, Mingam A, Charrier B (2004) Real-time PCR: what relevance to plant studies? J Exp Bot 55: 1445-1454.
10. Gianibelli MC, Larroque OR, MacRichie F, Wrigley CW (2001) Biochemical, genetic, and molecular characterization of wheat glutenin and its component subunits. Cereal Chem 78: 635-646.
11. Grimwade B, Tatham AS, Freedman RB, Shewry PR, Napier JA (1996) Comparison of the expression patterns of genes coding for wheat gluten proteins and proteins involved in the secretory pathway in developing caryopses of wheat. Plant Mol Biol 30: 1067-1073.
12. Gupta RM, Masci S, Lafiandra D, Bariana HS, MacRitchie F (1996) Accumulation of protein subunits and their polymers in developing grains of hexaploid wheats. J Exp Bot 47: 1377-1385.
13. Harberd NP, Bartels D, Thompson RD (1985) Analysis of the gliadin multigene loci in bread wheat using nullisomic-tetrasomic lines. Mol Gene Genet 198: 234-242.
14. He ZH, Yang J, Zhang Y, Quail KJ, Pena RJ (2004) Pan bread and dry white Chinese noodle quality in Chinese winter wheats. Euphytica 139: 257-267.
15. Huang XQ, Cloutier S (2008) Molecular characterization and genomic organization of low molecular weight glutenin subunit genes at the Glu-3 loci in hexaploid wheat (Triticum aestivum L.). Theor Appl Genet 116: 953-966.
16. Huang S, Sirikhachornkit A, Su X, Faris J, Gill B, Haselkorn R, Gornicki P (2002) Genes encoding plastid acetyl-CoA carboxylase and 3-phosphoglycerate kinase of the Triticum/Aegilops complex and the evolutionary history of polyploid wheat. Proc Natl Acad Sci USA 99: 8133-8138.
17. Ikeda TM, Nagamine T, Fukuoka H, Yano H (2002) Identification of new low-molecular-weight glutenin subunit genes in wheat. Theor Appl Genet 104: 680-687.
18. Jiang CX, Pei YH, Zhang YZ, Li XH, Yao DN, Yan YM, Hsam SLK, Zeller FJ (2008) Molecular cloning and characterization of four novel LMW glutenin subunit genes from Aegilops longissima, Triticum dicoccoides and T. zhukovskyi. Hereditas 145: 92-98.
19. Johal J, Gianibelli MC, Rahman S, Morell MK, Gale KR (2004) Characterization of low-molecular-weight glutenin genes in Aegilops tauschii. Theor Appl Genet 109: 1028-1040.
20. Kawaura K, Mochida K, Ogihara Y (2005) Expression profile of two storage-protein gene families in hexaploid wheat revealed by large-scale analysis of expressed sequence tags. Plant Physiol 139: 1870-1880.
21. Lee YK, Ciaffi M, Appels R, Morell MK (1999) The low-molecular-weight glutenin subunit proteins of primitive wheats. II. The genes from A-genome species. Theor Appl Genet 98: 126-134.
22. Lew EJL, Kuzmicky DD, Kasarda DD (1992) Characterization of low molecular weight glutenin subunits by reversed-phase high-performance liquid chromatography, sodium dodecyl sulfate-polyacrylamide gel electrophoresis, and N-terminal amino acid sequencing. Cereal Chem 69: 508-515.
23. Li XH, Zhang YZ, Gao LY, Wang AL, Ji KM, He ZH, Appel R, Ma WJ, Yan YM (2007) Molecular cloning, heterologous expression, and phylogenetic analysis of a novel y-type HMW glutenin subunit gene from the G genome of Triticum timopheevi. Genome 50: 1130-1140.
24. Li XH, Ma W, Gao LY, Zhang YZ, Wang AL, Ji KM, Wang K, Appels R, Yan Y (2008) A novel chimeric LMW-GS gene from the wild relatives of wheat Ae. kotschyi and Ae. juvenalis: evolution at the Glu-3 loci. Genetics 180: 93-101.
25. Liu X, Wang RC, Jia J (1999) Genome relationship among Sitopsis species of Aegilops and the B/G genome of Triticum assessed by RAPD markers. In: Slinkard AE (ed) Proceedings of the 9th International Wheat Genetics Symposium. University Extension Press, Saskatoon, pp 79-81.
26. Long H, Yan ZH, Wei YM, Zheng YL (2004) Molecular cloning of a novel low-molecular-weight glutenin subunit gene from wheat (Triticum aestivum L.), Variety 'Chuannong 16'. J Genet Genomics 30: 1179-1184.
27. Maruyama-Funatsuki W, Takata K, Funatsuki H, Tabiki T, Ito M, Nishio Z, Kato A, Saito K, Yahata E, Saruyama H, Yamauchi H (2005) Identification and characterization of a novel LMW-s glutenin gene of a Canadian Western extra-strong wheat. J Cereal Sci 41: 47-57.
28. Masci S, D'Ovidio R, Lafiandra D, Kasarda DD (1998) Characterization of a low-molecular-weight glutenin subunit gene from bread wheat and the corresponding protein that represents a major subunit of the glutenin polymer. Plant Physiol 118: 1147-1158.
29. Ng PKW, Slominski E, Johnson WJ, Bushuk W (1991) Changes in wheat endosperm proteins during grain maturation. In: Bushuk W, Tkachuk R (eds) Gluten proteins. American Association of Cereal Chemistry, St. Paul pp 740-754.
30. Ozdemir N, Cloutier S (2005) Expression analysis and physical mapping of low-molecular-weight glutenin loci in hexaploid wheat (Triticum aestivum L.). Genome 48: 401-410.
31. Panozzo J, Eagles HA, Wootton M (2001) Changes in protein composition during grain development in wheat. Aust J Agric Res 52: 485-493.
32. Pei YH, Wang AL, An XL, Li XH, Zhang YZ, Huang XQ, Yan YM (2007) Characterization and comparative analysis of three low molecular weight glutenin C-subunit genes isolated from Aegilops tauschii. Can J Plant Sci 87: 273-280.
33. Petersen G, Seberg O, Yde M, Berthelsen K (2006) Phylogenetic relationships of Triticum and Aegilops and evidence for the origin of the A, B, and D genomes of common wheat (Triticum aestivum). Mol Phylogenet Evol 39: 70-82.
34. Pist́n F, Martín A, Dorado G, Barro F (2004) Cloning and characterization of a gamma-3 hordein mRNA (cDNA) from Hordeum chilense (Roem. et Schult.). Theor Appl Genet 108: 1359-1365.
35. Pist́n F, Martín A, Dorado G, Barro F (2005) Cloning and molecular characterization of B-hordeins from Hordeum chilense (Roem. et Schult.). Theor Appl Genet 111: 551-560.
36. Pist́n F, Martín A, Dorado G, Barro F (2006) Cloning of nine r-gliadin mRNAs (cDNAs) from wheat and the molecular characterization of comparative transcript levels of g-gliadin subclasses. J Cereal Sci 43: 120-128.
37. Pist́n F, León E, Lazzeri PA, Barro F (2008) Isolation of two storage protein promoters from Hordeum chilense and characterization of their expression patterns in transgenic wheat. Euphytica 162: 371-379.
38. Sabelli PA, Shewry PR (1991) Characterization and organization of gene families at the Gli-1 loci of bread and durum wheats by restriction fragment analysis. Theor Appl Genet 83: 209-216.
39. Schultz JF, Milpetz PB, Ponting CP (1998) SMART, a simple modular architecture research tool: identification of signaling domains. Proc Natl Acad Sci USA 95: 5857-5864.
40. Shewry PR, Halford NG (2002) Cereal seed storage proteins: structures, properties and role in grain utilization. J Exp Bot 53: 947-958.
41. Wang ZQ, Long H, Zheng YL, Yan ZH, Wei YM, Lan XJ (2005) Cloning and analysis of LMW-GS genes from Triticum aestivum ssp. Tibetanum Shao. J Genet Genomics 32: 86-93.
42. Whelan JA, Russell NB, Whelan MA (2003) A method for the absolute quantification of cDNA using real-time PCR. J Immunol Methods 278: 261-269.
43. m genomes of wheat. Plant Cell 15: 1186-1197.
44. Yan Y, Hsam SLK, Yu JZ, Jiang Y, Zeller FJ (2003) Allelic variation of the HMW glutenin subunits in Aegilops tauschii accessions detected by Sodium Dodecyl Sulphate (SDS-PAGE), Acid Polyacrylamide Gel (A-PAGE) and Capillary Electrophoresis. Euphytica 130: 377-385.
45. t1 glutenin gene of Aegilops tauschii. Theor Appl Genet 108: 1349-1358.
46. t) from Aegilops tauschii. Genome 49: 735-745.
47. Zhang YZ, Li XH, Wang AL, An XL, Zhang Q, Pei YH, Gao LY, Ma WJ, Appels R, Yan YM (2008) Novel x-type high-molecular-weight glutenin genes from Aegilops tauschii and their implications on the wheat origin and evolution mechanism of Glu-D1-1 proteins. Genetics 178: 23-33.
48. Zhao H, Wang R, Guo A, Hu S, Sun G (2004) Development of primers specific for LMW-GS genes located on chromosome 1D and molecular characterization of a gene from Glu-D3 complex locus in bread wheat. Hereditas 141: 193-198.
49. Zhao XL, Xia XC, He ZH, Gale KR, Lei ZS, Appels R, Ma W (2006) Characterization of three low-molecular-weight Glu-D3 subunit genes in common wheat. Theor Appl Genet 113: 1247-1259.