Targeted metabolomics in an intrusive weed, Rumex obtusifolius L., grown under different environmental conditions reveals alterations of organ related metabolite pathway

Metabolomics

Volumn 6, Issue 4, 2010, Pages 497-510

  Miyagi, Atsuko ^a,b   Takahara, Kentaro ^b   Takahashi, Hideyuki ^c   Kawai Yamada, Maki ^a,d   Uchimiya, Hirofumi ^a,b,c  

^a SAITAMA UNIVERSITY   (Japan)

^b UNIVERSITY OF TOKYO   (Japan)

^c IWATE BIOTECHNOLOGY RESEARCH CENTER   (Japan)

^d JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

Capillary electrophoresis mass spectrometry; Citrate; Hierarchical clustering analysis; New leaves; Organ specific metabolites; Oxalate; Principal component analysis; Rumex obtusifolius; Stems

Indexed keywords

RUMEX; RUMEX OBTUSIFOLIUS;

EID: 78649327782     PISSN: 15733882     EISSN: 15733890     Source Type: Journal    
DOI: 10.1007/s11306-010-0220-0     Document Type: Article

References (30)

1. Calegario, F. F., Cosso, R. G., Fagian, M. M., Almeida, V., Jardim, W. F., Ježek, P., et al. (2003). Stimulation of potato tuber respiration by cold stress is associated with an increased capacity of both plant uncoupling mitochondrial protein (PUMP) and alternative oxidase. Journal of Bioenergetics and Biomembranes, 35, 211-220.
2. Cavers, P. B., & Harper, J. L. (1964). Rumex obtusifolius L. and R. crispus L. Journal of Ecology, 52, 737-766.
3. Cox, M. C. H., Benschop, J. J., Vreeburg, R. A. M., Wagemaker, C. A. M., Moritz, T., Peeters, A. J. M., et al. (2004). The roles of ethylene, auxin, abscisic acid, and gibberellin in the hyponastic growth of submerged Rumex palustris petioles. Plant Physiology, 136, 2948-2960.
4. Foyer, C. H., Vanacker, H., Gomez, L. D., & Harbinson, J. (2002). Regulation of photosynthesis and antioxidant metabolism in maize leaves at optimal and chilling temperatures: Review. Plant Physiology and Biochemistry, 40, 659-668.
5. Franceschi, V. R., & Nakata, P. A. (2005). Calcium oxalate in plants: Formation and function. Annual Review of Plant Biology, 56, 41-71.
6. Guy, C., Kaplan, F., Kopka, J., Selbig, J., & Hincha, D. K. (2008). Metabolomics of temperature stress. Physiologia Plantarum, 132, 220-235.
7. Holm, L. G., Plucknett, D. L., Pancho, J. V., & Herberger, J. P. (1977). Rumex crispus and Rumex obtusifolius. In L. G. Holm (Ed.), The world's worst weeds: Distribution and biology (pp. 401-408). Honolulu: University Press of Hawaii.
8. Hongo, A. (1986). Infestation of Rumex obtusifolius L., distribution pattern of its individual plants in sown grasslands in eastern Hokkaido. Weed Research, Japan, 31, 300-315.
9. Hongo, A. (1989). Survival and growth of seedling of Rumex obtusifolius L. & Rumex crispus L. in newly sown grassland. Weed Research, 29, 7-12.
10. Horie, H., & Nemoto, M. (1990). Comparison of the growth response to phosphorus and aluminum concentrations in four Rumex species. Weed Research, Japan, 35, 340-345.
11. Kaplan, F., Kopka, J., Haskell, D. W., Zhao, W., Cameron Schiller, K., Gatzke, N., et al. (2004). Exploring the temperature-stress metabolome of Arabidopsis. Plant Physiology, 136, 4159-4168.
12. Ke, W., Xiong, Z. T., Chen, S., & Chen, J. (2007). Effect of copper and mineral nutrition on growth, copper accumulation and mineral element uptake in two Rumex japonicus populations from a copper mine and an uncontaminated field sites. Environmental and Experimental Botany, 59, 59-67.
13. Löve, A., & Kapoor, B. M. (1967). A chromosome atlas of the collective genus Rumex. Cytologia, 32, 328-342.
14. Makuchi, T., & Sakai, H. (1984). Seedling survival and flowering of Rumex obtusifolius L. in various habitats. Weed Research, Japan, 29, 123-130.
15. Mclaren, J. S., & Smith, H. (1978). Phytochrome control of the growth and development of Rumex obtusifolius under simulated canopy light environments. Plant, Cell, and Environment, 1, 61-67.
16. Miyagi, A., Takahashi, H., Takahara, K., Hirabayashi, T., Nishimura, Y., Tezuka, T., et al. (2010). Principal component and hierarchical clustering analysis of metabolites in destructive weeds; polygonaceous plants. Metabolomics, 6, 146-155.
17. Pino, J., Haggar, R. J., Sans, F. X., Masalles, R. M., Hamilton, R. N. S., & Sackville-Hamilton, R. N. (1995). Clonal growth and fragment regeneration of Rumex obtusifolius L. Weed Research, Japan, 35, 141-148.
18. Proietti, S., Moscatello, S., Famiani, F., & Battistelli, A. (2009). Increase of ascorbic acid content and nutritional quality in spinach leaves during physiological acclimation to low temperature. Plant Physiology and Biochemistry, 47, 717-723.
19. Sanchez, D. H., Siahpoosh, M. R., Roessner, U., Udvardi, M., & Kopka, J. (2008). Plant metabolomics reveals conserved and divergent metabolic responses to salinity. Physiologia Plantarum, 132, 209-219.
20. Shulaev, V., Cortes, D., Miller, G., & Mittler, R. (2008). Metabolomics for plant stress response. Physiologia Plantarum, 132, 199-208.
21. Takahashi, H., Hayashi, M., Goto, F., Sato, S., Soga, T., Nishioka, T., et al. (2006a). Evaluation of metabolic alteration in transgenic rice overexpressing dihydrofavonol-4-reductase. Annals of Botany, 98, 819-825.
22. Takahashi, H., Watanabe, A., Tanaka, A., Hashida, S., Kawai-Yamada, M., Sonoike, K., et al. (2006b). Chloroplast NAD kinase is essential for energy transduction though the xanthophylls cycle in photosynthesis. Plant and Cell Physiology, 47, 1678-1682.
23. Tolrà, R. P., Poschenrieder, C., Luppi, B., & Barceló, J. (2005). Aluminium-induced changes in the profiles of both organic acids and phenolic substances underlie Al tolerance in Rumex acetosa L. Environmental and Experimental Botany, 54, 231-238.
24. Toole, E. H., & Brown, E. (1946). Final results of the Duvel buried seed experiment. Journal of Agricultural Research, 72, 201-206.
25. Totterdell, S., & Roberts, E. H. (1979). Effects of low temperature on the loss of innate dormancy and the development of induced dormancy in seeds of Rumex obtusifolius L. and Rumex crispus L. Plant, Cell and Environment, 2, 131-137.
26. Urbanczyk-Wochniak, E., Baxter, C., Kolbe, A., Kopka, J., Sweetlove, L. J., & Fernie, A. R. (2005). Profiling of diurnal patterns of metabolite and transcript abundance in potato (Solanum tuberosum) leaves. Planta, 221, 891-903.
27. van Assche, J. A., & Vanlerberghe, K. A. (1989). The role of temperature on the dormancy cycle of seeds of Rumex obtusifolius L. Functional Ecology, 3, 107-115.
28. Voesenek, L. A. C. J., Colmer, T. D., Pierik, R., Millenaar, F. F., & Peeters, A. J. M. (2006). How plants cope with complete submergence. New Phytologist, 170, 213-226.
29. Yang, M. T., Chen, S. L., Lin, C. Y., & Chen, Y. M. (2005). Chilling stress suppresses chloroplast development and nuclear gene expression in leaves of mung bean seedlings. Planta, 221, 374-385.
30. Yin, G., Sun, H., Xin, X., Qin, G., Liang, Z., & Jing, X. (2009). Mitochondrial damage in the soybean seed axis during imbibition at chilling temperatures. Plant Cell Physiology, 50, 1305-1318.