Visualization of dynamic conformational switching of the G-quadruplex in a DNA nanostructure

Journal of the American Chemical Society

Volumn 132, Issue 46, 2010, Pages 16311-16313

  Sannohe, Yuta ^a   Endo, Masayuki ^b,c   Katsuda, Yousuke ^a   Hidaka, Kumi ^a   Sugiyama, Hiroshi ^a,b,c  

^a KYOTO UNIVERSITY   (Japan)

^b KYOTO UNIVERSITY   (Japan)

^c JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CONFORMATIONAL CHANGE; CONFORMATIONAL SWITCHING; DNA NANOSTRUCTURES; G-QUADRUPLEX STRUCTURE; G-QUADRUPLEXES; GLOBAL CHANGE; NANOSCAFFOLDS; REAL-TIME OBSERVATION;

ATOMIC FORCE MICROSCOPY;

VISUALIZATION;

COMPLEMENTARY DNA; DNA; GUANINE QUADRUPLEX; MOLECULAR SCAFFOLD; NANOMATERIAL; POTASSIUM ION; SINGLE STRANDED DNA;

AMINO ACID SEQUENCE; ARTICLE; ATOMIC FORCE MICROSCOPY; BASE PAIRING; CONFORMATIONAL TRANSITION; DNA STRAND; TERMINAL SEQUENCE;

DNA; G-QUADRUPLEXES; MICROSCOPY, ATOMIC FORCE; MODELS, MOLECULAR; NANOSTRUCTURES; NUCLEIC ACID CONFORMATION;

EID: 78649282278     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja1058907     Document Type: Article

References (24)

1. Bacolla, A. and Wells, R. D. J. Biol. Chem. 2004, 279, 47411-47414
2. Wells, R. D. Trends Biochem. Sci. 2007, 32, 271-278
3. Bacolla, A. and Wells, R. D. Mol. Carcinog. 2009, 48, 273-285
4. Zhao, J., Bacolla, A., Wang, G., and Vasquez, K. M. Cell. Mol. Life Sci. 2010, 67, 43-62
5. Rajendran, A., Nakano, S., and Sugimoto, N. Chem. Commun. 2010, 46, 1299-1301
6. Patel, D. J., Phan, A. T., and Kuryavyi, V. Nucleic Acids Res. 2007, 35, 7429-7455
7. Lipps, H. J. and Rhodes, D. Trends Cell Biol. 2009, 19, 414-422
8. Sannohe, Y. and Sugiyama, H. Curr. Protoc. Nucleic Acid Chem. 2010, 40, 17.2.1-17.2.17
9. Xu, Y., Sato, H., Sannohe, Y., Shinohara, K., and Sugiyama, H. J. Am. Chem. Soc. 2008, 130, 16470-16471
10. Mashimo, T., Yagi, H., Sannohe, Y., Rajendran, A., and Sugiyama, H. J. Am. Chem. Soc. 2010, 132, 14910-14918
11. Rothemund, P. W. Nature 2006, 440, 297-302
12. Endo, M., Katsuda, Y., Hidaka, K., and Sugiyama, H. J. Am. Chem. Soc. 2010, 132, 1592-1597
13. Endo, M., Katsuda, Y., Hidaka, K., and Sugiyama, H. Angew. Chem., Int. Ed., in press.
14. Gray, R. D. and Chaires, J. B. Nucleic Acids Res. 2008, 36, 4191-4203
15. Dai, J., Carver, M., and Yang, D. Biochimie 2008, 90, 1172-1183
16. Zhang, N., Phan, A. T., and Patel, D. J. J. Am. Chem. Soc. 2005, 127, 17277-17285
17. Phan, A. T. and Patel, D. J. J. Am. Chem. Soc. 2003, 125, 15021-15027
18. Wang, Y. and Patel, D. J. Structure 1993, 1, 263-282
19. Ambrus, A., Chen, D., Dai, J., Bialis, T., Jones, R. A., and Yang, D. Nucleic Acids Res. 2006, 34, 2723-2735
20. Luu, K. N., Phan, A. T., Kuryavyi, V., Lacroix, L., and Patel, D. J. J. Am. Chem. Soc. 2006, 128, 9963-9970
21. Xu, Y., Noguchi, Y., and Sugiyama, H. Bioorg. Med. Chem. 2006, 14, 5584-5591
22. Mao, C., Sun, W., Shen, Z., and Seeman, N. C. Nature 1999, 397, 144-146
23. Liu, H. and Liu, D. Chem. Commun. 2009, 19, 2625-2636
24. Li, Z. and Mirkin, C. A. J. Am. Chem. Soc. 2005, 127, 11568-11569