Plant type differently promote the arbuscular mycorrhizal fungi biodiversity in the rhizosphere after revegetation of a degraded, semiarid land

Soil Biology and Biochemistry

Volumn 43, Issue 1, 2011, Pages 167-173

  Alguacil, M M ^a   Torres, M P ^b   Torrecillas, E ^a   Diaz G ^b   Roldan A ^a  

^a RESEARCH GROUP ON QUALITY   (Spain)

^b MIGUEL HERNÁNDEZ UNIVERSITY   (Spain)

Author keywords

Arbuscular mycorrhizal fungi; Biodiversity; Ephedra fragilis; Pistacia lentiscus; Retama sphaerocarpa; Revegetation; Rhamnus lycioides; Semiarid degraded soils; Small ribosomal subunit

Indexed keywords

ARBUSCULAR MYCORRHIZAL FUNGI; DEGRADED SOILS; EPHEDRA FRAGILIS; PISTACIA LENTISCUS; RETAMA SPHAEROCARPA; RHAMNUS LYCIOIDES; RIBOSOMAL SUBUNITS;

BIODIVERSITY; CLONING; GENE ENCODING; POLYMERASE CHAIN REACTION; REVEGETATION; SOIL CONSERVATION; SOILS;

FUNGI;

ARBUSCULAR MYCORRHIZA; BIODIVERSITY; GENETIC ANALYSIS; GROWTH RATE; HERB; LAND DEGRADATION; PHYLOGENETICS; REVEGETATION; RHIZOSPHERE; SEMIARID REGION; SOIL TYPE; SPECIES DIVERSITY;

SPAIN;

ARBUSCULAR; EPHEDRA; EPHEDRA FRAGILIS; FUNGI; GLOMUS; PARAGLOMUS; PISTACIA LENTISCUS; RETAMA SPHAEROCARPA; RHAMNUS; RHAMNUS LYCIOIDES;

EID: 78449312022     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.soilbio.2010.09.029     Document Type: Article

References (52)

1. Alguacil M.M., Lumini E., Roldán A., Salinas-García J.R., Bonfante P., Bianciotto V. The impact of tillage practices on arbuscular mycorrhizal fungal diversity in crop fields in subtropical conditions. Ecological Applications 2008, 18:527-536.
2. Alguacil M.M., Díaz-Pereira E., Caravaca F., Fernández D.A., Roldán A. Increased diversity of arbuscular mycorrhizal fungi in a long-term field experiment via application of organic amendments to a semiarid degraded soil. Applied and Environmental Microbiology 2009, 75:4254-4263.
3. Alguacil M.M., Roldán A., Torres M.P. Assessing the diversity of AM fungi in arid gypsophilous plant communities. Environmental Microbiology 2009, 11:2649-2659.
4. Altschul S.F., Madden T.L., Schäffer A.A., Zhang J., Zhang Z., Miller W., Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 1997, 25:3389-3402.
5. Azcón-Aguilar C., Palenzuela J., Roldán A., Bautista S., Vallejo R., Barea J.M. Analysis of the mycorrhizal potential in the rhizosphere of representative plant species from desertificationthreatened Mediterranean shrublands. Applied Soil Ecology 2003, 22:29-37.
6. Bedini S., Pellegrino E., Avio L., Pellegrini S., Bazzoffi P., Argese E., Giovanetti M. Changes in soil aggregation and glomalin-related soil protein content as affected by the arbuscular mycorrhizal fungal species Glomus mosseae and Glomus intraradices. Soil Biology and Biochemistry 2009, 41:1491-1496.
7. Burrows R.L., Pfleger F.L. Arbuscular mycorrhizal fungi respond to increasing plant diversity. Canadian Journal of Botany 2002, 80:120-130.
8. Caravaca F., Barea J.M., Figueroa D., Roldán A. Assessing the effectiveness of mycorrhizal inoculation and soil compost addition for reafforestation with Olea europaea subsp. sylvestris through changes in soil biological and physical parameters. Applied Soil Ecology 2002, 20:107-118.
9. Caravaca F., Alguacil M.M., Figueroa D., Barea J.M., Roldán A. Re-establishment of Retama sphaerocarpa as a target species for reclamation of soil physical and biological properties in a semi-arid Mediterranean area. Forest Ecology and Management 2003, 182:49-58.
10. Caravaca F., Alguacil M.M., Barea J.M., Roldán A. Survival of inocula and native AM fungi species associated with shrubs in a degraded Mediterranean ecosystem. Soil Biology and Biochemistry 2005, 37:227-233.
11. Cesaro P., van Tuinen D., Copetta A., Chatagnier O., Berta G., Gianinazzi S., Lingua G. Preferential colonization of Solanum tuberosum L. roots by the fungus Glomus intraradices in arable soil of a potato farming area. Applied and Environmental Microbiology 2008, 74:5776-5783.
12. Colwell R. EstimateS: Statistical Estimation of Species Richness and Shared Species from Samples, Version 8.0. User' guide 2005, University of Connecticut, Storrs. http://viceroy.eeb.uconn.edu/estimates.
13. Douhan G.W., Petersen C., Bledsoe C.S., Rizzo D.M. Contrasting root associated fungi of three common oak-woodland plant species based on molecular identification: host specificity or non-specific amplification?. Mycorrhiza 2005, 15:365-372.
14. Ferrol N., Calvente R., Cano C., Barea J.M., Azcón-Aguilar C. Analysing arbuscular mycorrhizal fungal diversity in shrub-associated resource islands from a desertification-threatened semiarid Mediterranean ecosystem. Applied Soil Ecology 2004, 25:123-133.
15. Francis D.F., Thornes J.B. Matorral: erosion and reclamation. Soil Degradation and Rehabilitation in Mediterranean Environmental Conditions 1990, 87-115. Consejo Superior de Investigaciones Científicas, Murcia, Spain. J. Albaladejo, M.A. Stocking, E. Díaz (Eds.).
16. Gollotte A., van Tuinen D., Atkinson D. Diversity of arbuscular mycorrhizal fungi colonising roots of the grass species Agrostis capillaris and Lolium perenne in a field experiment. Mycorrhiza 2004, 14:111-117.
17. Helgason T., Merryweather J.W., Denison J., Wilson P., Young J.P.W., Fitter A.H. Selectivity and functional diversity in arbuscular mycorrhizas of co-occurring fungi and plants from a temperate deciduous woodland. Journal of Ecology 2002, 90:371-384.
18. Helgason T., Merryweather J.W., Young J.P.W., Fitter A.H. Specificity and resilience in the arbuscular mycorrhizal fungi of a natural woodland community. Journal of Ecology 2007, 95:623-630.
19. Hempel S., Renker C., Buscot F. Differences in the species composition of arbuscular mycorrhizal fungi in spore, root and soil communities in a grassland ecosystem. Environmental Microbiology 2007, 9:1930-1938.
20. Herrera M.A., Salamanca C.P., Barea J.M. Inoculation of woody legumes with selected arbuscular mycorrhizal fungi and rhizobia to recover desertified Mediterranean ecosystems. Applied and Environmental Microbiology 1993, 59:129-133.
21. Husband R., Herre E.A., Turner S.L., Gallery R., Young J.P.W. Molecular diversity of arbuscular mycorrhizal fungi and patterns of host association over time and space in a tropical forest. Molecular Ecology 2002, 11:2669-2678.
22. Jacobson K.M. Moisture and substrate stability determine VA mycorrhizal fungal community distribution and structure in arid grassland. Journal of Arid Environments 1997, 35:59-75.
23. Johnson D., Vandenkoornhuyse P., Leake J.R., Gilbert L., Booth R.E., Grime J.P., Young P.W., Read D.J. Plant communities affect arbuscular mycorrhizal fungal diversity and community composition in grassland microcosm. New Phytologist 2003, 161:503-515.
24. Kafkas S., Ortas I. Various mycorrhizal fungi enhance dry weights, P and Zn uptake of four Pistacia species. Journal of Plant Nutrition 2009, 32:146-159.
25. Lee J., Lee S., Young J.P.W. Improved PCR primers for the detection and identification of arbuscular mycorrhizal fungi. FEMS Microbiology Ecology 2008, 65:339-349.
26. Liu Y., He L., An L., Helgason T., Feng H. Arbuscular mycorrhizal dynamics in a chronosequence of Caragana korshinskii plantations. FEMS Microbiology Ecology 2009, 67:81-92.
27. Maidak B.L., Cole J.R., Lilburn T.G., Parker C.T., Saxman P.R., Farris R.J., Garrity G.M., Olsen G.J., Schmidt T.M., Tiedje J.M. The RDP-II (Ribosomal database Project). Nucleic Acids Research 2001, 29:173-174.
28. Nicholas, K.B., Nicholas, H.B. Jr., 1997. GeneDoc: a tool for editing and annotating multiple sequence alignments. Distributed by the authors.
29. Öpik M., Moora M., Liira J., Kõljalg U., Zobel M., Sen R. Divergent arbuscular mycorrhizal communities colonize roots of Pulsatilla spp. in boreal Scots pine forest and grassland soils. New Phytologist 2003, 160:581-593.
30. Öpik M., Moora M., Liira J., Zobel M. Composition of root-colonizing arbuscular mycorrhizal fungal communities in different ecosystems around the globe. Journal of Ecology 2006, 94:778-790.
31. Requena N., Jeffries P., Barea J.M. Assessment of natural mycorrhizal potential in a desertified semi-arid ecosystem. Applied and Environmental Microbiology 1996, 62:842-847.
32. Requena N., Pérez-Solis E., Azcón-Aguilar C., Jeffries P., Barea J.M. Management of indigenous plant-microbe symbioses aids restoration of desertified ecosystems. Applied and Environmental Microbiology 2001, 67:495-498.
33. Rillig M.C., Mardatin N.F., Leifheit E.F., Antunes P.M. Mycelium of arbuscular mycorrhizal fungi increases soil water repellency and is sufficient to maintain water-stable soil aggregates. Soil Biology and Biochemistry 2010, 42:1189-1191.
34. Roldán A., Albaladejo J. Vesicular-arbuscular mycorrhiza (VAM) fungal populations in a xeric Torriorthent receiving urban refuse. Soil Biology and Biochemistry 1993, 25:451-456.
35. Saitou N., Nei M. The Neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 1987, 4:406-425.
36. Santos-González J.C., Finlay R.D., Tehler A. Seasonal dynamics of arbuscular mycorrhizal fungal communities in roots in a seminatural grassland. Applied and Environmental Microbiology 2007, 73:5613-5623.
37. Scheublin T.R., Ridgway K.P., Young J.P.W., van der Heijden M.G.A. Nonlegumes, legumes, and root nodules harbor different arbuscular mycorrhizal fungal communities. Applied and Environmental Microbiology 2004, 70:6240-6246.
38. Smith S.E., Read D.J. Mycorrhizal Symbiosis 2008, Academic Press, New York, 787 pp. third ed.
39. Soil Survey Staff (SSS) Keys to Soil Taxonomy 2006, USDA, Natural Resources Conservation Service, WashingtonDC. tenth ed.
40. Stockinger H., Walker C., Schüßler W. 'Glomus intraradices DAOM197198', a model fungus in arbuscular mycorrhiza research, is not Glomus intraradices. New Phytologist 2009, 183:1176-1187.
41. Swofford D.L. PAUP: Phylogenetic Analysis Using Parsimony (And Other Methods), Version 4.08b10 for Machintosh 2002, Sinauer Associates Inc., Sunderland, MA.
42. Sýkorová Z., Ineichen K., Wiemken A., Redecker D. The cultivation bias: different communities of arbuscular mycorrhizal fungi detected in roots from the field, from bait plant transplanted to the field, and from a greenhouse trap experiment. Mycorrhiza 2007, 18:1-14.
43. Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 1997, 24:4876-4882.
44. Van der Heijden M.G.A., Klironomos J.N., Ursic M., Moutoglis P., Streitwolf-Engel R., Boller T., Wiemken A., Sanders I.R. Mycorrhizal fungal diversity determines plant biodiversity, ecosystem variability and productivity. Nature 1998, 396:69-72.
45. Van der Heijden M.G.A., Streitwolf-Engel R., Riedl R., Siegrist S., Neudecker A., Ineichen K., Boller T., Wiemken A., Sanders I.R. The mycorrhizal contribution to plant productivity, plant nutrition and soil structure in experimental grassland. New Phytologist 2006, 172:739-752.
46. Vandenkoornhuyse P., Husband R., Daniell T.J., Watson I.J., Duck J.M., Fitter A.H., Young J.P.W. Arbuscular mycorrhizal community composition associated with two plant species in a grassland ecosystem. Molecular Ecology 2002, 11:1555-1564.
47. Vandenkoornhuyse P., Ridgway K.P., Watson I.J., Fitter A.H., Young J.P.W. Co-existing grass species have distinctive arbuscular mycorrhizal communities. Molecular Ecology 2003, 12:3085-3095.
48. Vogelsang K.M., Reynolds H.L., Bever J.D. Mycorrhizal fungal identity and richness determine the diversity and productivity of a tallgrass prairie system. New Phytologist 2006, 72:554-562.
49. White T.J., Bruns T., Lee S., Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogen-etics. PCR Protocols. A Guide to Methods and Applications 1990, 315-322. Academic Press, San Diego. M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.).
50. Wirsel S.G.R. Homogenous stands of a wetland grass harbour diverse consortia of arbuscular mycorrhizal fungi. FEMS Microbiology Ecology 2004, 48:129-138.
51. Wright S.F., Anderson R.L. Aggregate stability and glomalin in alternative crop rotations for the central Great Plains. Biology and Fertility of Soils 2000, 31:249-253.
52. Wubet T., Weiß M., Kottke I., Oberwinkler F. Morphology and molecular diversity of arbuscular mycorrhizal fungi in wild and cultivated yew (Taxus baccata). Canadian Journal of Botany 2003, 81:255-266.