메뉴 건너뛰기




Volumn 26, Issue 23, 2010, Pages 2993-2994

SPLATCHE2: A spatially explicit simulation framework for complex demography, genetic admixture and recombination

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER PROGRAM; COMPUTER SIMULATION; DEMOGRAPHY; ETHNIC AND RACIAL GROUPS; EVOLUTION; GENETIC MARKER; GENETIC RECOMBINATION; GENETIC VARIABILITY; GENETICS; HUMAN; METHODOLOGY; POPULATION GENETICS;

EID: 78449304078     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btq579     Document Type: Article
Times cited : (93)

References (21)
  • 1
    • 0036964474 scopus 로고    scopus 로고
    • Approximate Bayesian computation in population genetics
    • Beaumont,M.A. et al. (2002) Approximate Bayesian computation in population genetics. Genetics, 162, 2025-2035.
    • (2002) Genetics , vol.162 , pp. 2025-2035
    • Beaumont, M.A.1
  • 2
    • 14044258418 scopus 로고    scopus 로고
    • Modern humans did not admix with Neanderthals during their range expansion into Europe
    • Currat,M. and Excoffier,L. (2004) Modern humans did not admix with Neanderthals during their range expansion into Europe. PLoS Biol., 2, e421.
    • (2004) PLoS Biol. , vol.2
    • Currat, M.1    Excoffier, L.2
  • 3
    • 20344378970 scopus 로고    scopus 로고
    • The effect of the Neolithic expansion on European molecular diversity
    • Currat,M. and Excoffier,L. (2005) The effect of the Neolithic expansion on European molecular diversity. Proc. Roy. Soc. Lond B. Biol. Sci., 272, 679-688.
    • (2005) Proc. Roy. Soc. Lond B. Biol. Sci. , vol.272 , pp. 679-688
    • Currat, M.1    Excoffier, L.2
  • 4
    • 33746456056 scopus 로고    scopus 로고
    • Comment on "Ongoing adaptive evolution of ASPM, a brain size determinant in Homo sapiens" and "Microcephalin, a gene regulating brain size, continues to evolve adaptively in humans"
    • author reply 172
    • Currat,M. et al. (2006) Comment on "Ongoing adaptive evolution of ASPM, a brain size determinant in Homo sapiens" and "Microcephalin, a gene regulating brain size, continues to evolve adaptively in humans". Science, 313, 172; author reply 172.
    • (2006) Science , vol.313 , pp. 172
    • Currat, M.1
  • 5
    • 1342288606 scopus 로고    scopus 로고
    • SPLATCHE: a program to simulate genetic diversity taking into account environmental heterogeneity
    • Currat,M. et al. (2004) SPLATCHE: a program to simulate genetic diversity taking into account environmental heterogeneity. Mol. Ecol. Notes, 4, 139-142.
    • (2004) Mol. Ecol. Notes , vol.4 , pp. 139-142
    • Currat, M.1
  • 6
    • 47749139699 scopus 로고    scopus 로고
    • The hidden side of invasions: massive introgression by local genes
    • Currat,M. et al. (2008) The hidden side of invasions: massive introgression by local genes. Evolution, 62, 1908-1920.
    • (2008) Evolution , vol.62 , pp. 1908-1920
    • Currat, M.1
  • 7
    • 85007110786 scopus 로고    scopus 로고
    • ARLEQUIN (version 3.0): an integrated software package for population genetics data analysis
    • Excoffier,L. et al. (2005) ARLEQUIN (version 3.0): an integrated software package for population genetics data analysis. Evol. Bioinformatics Online, 1, 47-50.
    • (2005) Evol. Bioinformatics Online , vol.1 , pp. 47-50
    • Excoffier, L.1
  • 8
    • 77953032930 scopus 로고    scopus 로고
    • Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux andWindows
    • Excoffier,L. and Lischer,H.E.L. (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux andWindows. Mol. Ecol. Res., 10, 564-567.
    • (2010) Mol. Ecol. Res. , vol.10 , pp. 564-567
    • Excoffier, L.1    Lischer, H.E.L.2
  • 9
    • 33750461615 scopus 로고    scopus 로고
    • Identifying the environmental factors that determine the genetic structure of populations
    • Foll,M. and Gaggiotti,O. (2006) Identifying the environmental factors that determine the genetic structure of populations. Genetics, 174, 875-891.
    • (2006) Genetics , vol.174 , pp. 875-891
    • Foll, M.1    Gaggiotti, O.2
  • 10
    • 77952840471 scopus 로고    scopus 로고
    • Principal component analysis under population genetic models of range expansion and admixture
    • Francois,O. et al. (2010) Principal component analysis under population genetic models of range expansion and admixture. Mol. Biol. Evol., 27, 1257-1268
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 1257-1268
    • Francois, O.1
  • 11
    • 20444406878 scopus 로고    scopus 로고
    • Bayesian estimation of recent migration rates after a spatial expansion
    • Hamilton,G. et al. (2005) Bayesian estimation of recent migration rates after a spatial expansion. Genetics, 170, 409-417
    • (2005) Genetics , vol.170 , pp. 409-417
    • Hamilton, G.1
  • 13
    • 0036184745 scopus 로고    scopus 로고
    • Generating samples under a Wright-Fisher neutral model
    • Hudson,R.R. (2002) Generating samples under a Wright-Fisher neutral model. Bioinformatics, 18, 337-338
    • (2002) Bioinformatics , vol.18 , pp. 337-338
    • Hudson, R.R.1
  • 15
    • 33244467305 scopus 로고    scopus 로고
    • The fate of mutations surfing on the wave of a range expansion
    • Klopfstein,S. et al. (2005) The fate of mutations surfing on the wave of a range expansion. Mol. Biol. Evol., 23, 482-490
    • (2005) Mol. Biol. Evol. , vol.23 , pp. 482-490
    • Klopfstein, S.1
  • 16
    • 7244221627 scopus 로고    scopus 로고
    • SIMCOAL 2.0: a program to simulate genomic diversity over large recombining regions in a subdivided population with a complex history
    • Laval,G. and Excoffier,L. (2004) SIMCOAL 2.0: a program to simulate genomic diversity over large recombining regions in a subdivided population with a complex history. Bioinformatics, 20, 1485-2487.
    • (2004) Bioinformatics , vol.20 , pp. 1485-2487
    • Laval, G.1    Excoffier, L.2
  • 17
    • 46249111534 scopus 로고    scopus 로고
    • quantiNEMO: an individual-based program to simulate quantitative traits with explicit genetic architecture in a dynamic metapopulation
    • Neuenschwander,S. et al. (2008) quantiNEMO: an individual-based program to simulate quantitative traits with explicit genetic architecture in a dynamic metapopulation. Bioinformatics 24, 1552-1553.
    • (2008) Bioinformatics , vol.24 , pp. 1552-1553
    • Neuenschwander, S.1
  • 18
    • 23744491421 scopus 로고    scopus 로고
    • Recovering the geographic origin of early modern humans by realistic and spatially explicit simulations
    • Ray,N. et al. (2005) Recovering the geographic origin of early modern humans by realistic and spatially explicit simulations. Genome Res., 15, 1161-1167.
    • (2005) Genome Res , vol.15 , pp. 1161-1167
    • Ray, N.1
  • 19
    • 0037227366 scopus 로고    scopus 로고
    • Intra-deme molecular diversity in spatially expanding populations
    • Ray,N. et al. (2003) Intra-deme molecular diversity in spatially expanding populations. Mol. Biol. Evol., 20, 76-86.
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 76-86
    • Ray, N.1
  • 20
    • 33845788716 scopus 로고    scopus 로고
    • Molecular diversity after a range expansion in heterogeneous environments
    • Wegmann,D. et al. (2006) Molecular diversity after a range expansion in heterogeneous environments. Genetics, 174, 2009-2020.
    • (2006) Genetics , vol.174 , pp. 2009-2020
    • Wegmann, D.1
  • 21
    • 77951177432 scopus 로고    scopus 로고
    • ABCtoolbox: a versatile toolkit for approximate Bayesian computations
    • Wegmann,D. et al. (2010) ABCtoolbox: a versatile toolkit for approximate Bayesian computations. BMC Bioinformatics, 11, 116.
    • (2010) BMC Bioinformatics , vol.11 , pp. 116
    • Wegmann, D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.