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Volumn 6393 LNCS, Issue , 2010, Pages 201-206

Relative lempel-ziv compression of genomes for large-scale storage and retrieval

Author keywords

[No Author keywords available]

Indexed keywords

BASE SEQUENCES; FAST SEARCH; GENOMIC DATA; HUMAN GENOMES; POINT MUTATIONS; R-SEQUENCES; SELF-INDEX; STORAGE AND RETRIEVALS;

EID: 78449295543     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-16321-0_20     Document Type: Conference Paper
Times cited : (136)

References (11)
  • 1
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    • Compression of biological sequences by greedy off-line textual substitution
    • Apostolico, A., Lonardi, S.: Compression of biological sequences by greedy off-line textual substitution. In: Proc. IEEE DCC, pp. 143-152 (2000)
    • (2000) Proc. IEEE DCC , pp. 143-152
    • Apostolico, A.1    Lonardi, S.2
  • 2
    • 34547630480 scopus 로고    scopus 로고
    • A simple statistical algorithm for biological sequence compression
    • Cao, M.D., Dix, T., Allison, L., Mears, C.: A simple statistical algorithm for biological sequence compression. In: Proc. IEEE DCC, pp. 43-52 (2007)
    • (2007) Proc. IEEE DCC , pp. 43-52
    • Cao, M.D.1    Dix, T.2    Allison, L.3    Mears, C.4
  • 3
    • 0033691587 scopus 로고    scopus 로고
    • A compression algorithm for DNA sequences and its applications in genome comparison
    • ACM, New York
    • Chen, X., Kwong, S., Li, M.: A compression algorithm for DNA sequences and its applications in genome comparison. In: Proc. RECOMB, p. 107. ACM, New York (2000)
    • (2000) Proc. RECOMB , pp. 107
    • Chen, X.1    Kwong, S.2    Li, M.3
  • 4
    • 58349097721 scopus 로고    scopus 로고
    • Human genomes as email attachments
    • Christley, S., Lu, Y., Li, C., Xie, X.: Human genomes as email attachments. Bioinformatics 25(2), 274-275 (2009)
    • (2009) Bioinformatics , vol.25 , Issue.2 , pp. 274-275
    • Christley, S.1    Lu, Y.2    Li, C.3    Xie, X.4
  • 5
    • 84925291641 scopus 로고
    • Compression of DNA sequences
    • Grumbach, S., Tahi, F.: Compression of DNA sequences. In: Proc. IEEE DCC, pp. 340-350 (1993)
    • (1993) Proc. IEEE DCC , pp. 340-350
    • Grumbach, S.1    Tahi, F.2
  • 6
  • 7
    • 77950788830 scopus 로고    scopus 로고
    • Storage and retrieval of highly repetitive sequence collections
    • Mäkinen, V., Navarro, G., Sirén, J., Välimäki, N.: Storage and retrieval of highly repetitive sequence collections. J. Computational Biology 17(3), 281-308 (2010)
    • (2010) J. Computational Biology , vol.17 , Issue.3 , pp. 281-308
    • Mäkinen, V.1    Navarro, G.2    Sirén, J.3    Välimäki, N.4
  • 10
    • 26444510631 scopus 로고    scopus 로고
    • A guaranteed compression scheme for repetitive DNA sequences
    • Rivals, E., Delahaye, J., Dauchet, M., Delgrange, O.: A guaranteed compression scheme for repetitive DNA sequences. In: Proc. IEEE DCC, p. 453 (1996)
    • (1996) Proc. IEEE DCC , pp. 453
    • Rivals, E.1    Delahaye, J.2    Dauchet, M.3    Delgrange, O.4
  • 11
    • 0017493286 scopus 로고
    • A universal algorithm for sequential data compression
    • Ziv, J., Lempel, A.: A universal algorithm for sequential data compression. IEEE Transactions on Information Theory 23(3), 337-343 (1977)
    • (1977) IEEE Transactions on Information Theory , vol.23 , Issue.3 , pp. 337-343
    • Ziv, J.1    Lempel, A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.