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Volumn 41, Issue SUPPL. 2, 2010, Pages 8-15

Linkage disequilibrium and historical effective population size in the Thoroughbred horse

Author keywords

Effective population size; Horse; Linkage disequilibrium; Population history; Single nucleotide polymorphism; Thoroughbred

Indexed keywords

EQUIDAE;

EID: 78449274513     PISSN: 02689146     EISSN: 13652052     Source Type: Journal    
DOI: 10.1111/j.1365-2052.2010.02092.x     Document Type: Conference Paper
Times cited : (85)

References (48)
  • 1
    • 67650666437 scopus 로고    scopus 로고
    • Extent and consistency of linkage disequilibrium and identification of DNA markers for production and egg quality traits in commercial layer chicken populations
    • Abasht B., Sandford E., Arango J., etal. (2009) Extent and consistency of linkage disequilibrium and identification of DNA markers for production and egg quality traits in commercial layer chicken populations. BMC Genomics 10 (Suppl. 2), S2.
    • (2009) BMC Genomics , vol.10 , Issue.SUPPL. 2 , pp. 2
    • Abasht, B.1    Sandford, E.2    Arango, J.3
  • 5
    • 36849093104 scopus 로고    scopus 로고
    • Accuracy of genomic selection using different methods to define haplotypes
    • Calus M.P.L., Meuwissen T.H.E., De Roos A.P.W., &, Veerkamp R.F., (2008) Accuracy of genomic selection using different methods to define haplotypes. Genetics 178, 553-61.
    • (2008) Genetics , vol.178 , pp. 553-61
    • Calus, M.P.L.1    Meuwissen, T.H.E.2    De Roos, A.P.W.3    Veerkamp, R.F.4
  • 7
    • 0035543326 scopus 로고    scopus 로고
    • Microsatellite diversity, pedigree relatedness and the contributions of founder lineages to thoroughbred horses
    • Cunningham E.P., Dooley J.J., Splan R.K., &, Bradley D.G., (2001) Microsatellite diversity, pedigree relatedness and the contributions of founder lineages to thoroughbred horses. Animal Genetics 32, 360-4.
    • (2001) Animal Genetics , vol.32 , pp. 360-4
    • Cunningham, E.P.1    Dooley, J.J.2    Splan, R.K.3    Bradley, D.G.4
  • 8
    • 78449289100 scopus 로고    scopus 로고
    • The impact of genetic architecture on genome-wide evaluation methods
    • Thesis (PhD) of Daetwyler, H. D., Wageningen University, NL
    • Daetwyler H.D., Pong-Wong R., Villanueva B., &, Woolliams J.A., (2009) The impact of genetic architecture on genome-wide evaluation methods. In: Genome-Wide Evaluation of Populations, Thesis (PhD) of Daetwyler, H. D., Wageningen University, NL.
    • (2009) Genome-Wide Evaluation of Populations
    • Daetwyler, H.D.1    Pong-Wong, R.2    Villanueva, B.3    Woolliams, J.A.4
  • 12
    • 78449308374 scopus 로고    scopus 로고
    • Investigation of Dwarfism among Miniature Horses using the Illumina Horse SNP50 Bead Chip
    • Eberth J., Swerczak T., &, Bailey E., (2009) Investigation of Dwarfism Among Miniature Horses using the Illumina Horse SNP50 Bead Chip. Journal of Equine Veterinary Science 29, 315.
    • (2009) Journal of Equine Veterinary Science , vol.29 , pp. 315
    • Eberth, J.1    Swerczak, T.2    Bailey, E.3
  • 14
    • 0034835229 scopus 로고    scopus 로고
    • Gene conversion and different population histories may explain the contrast between polymorphism and linkage disequilibrium levels
    • Frisse L., Hudson R.R., Bartoszewicz A., Wall J.D., Donfack J., &, Di Rienzo A., (2001) Gene conversion and different population histories may explain the contrast between polymorphism and linkage disequilibrium levels. American Journal of Human Genetics 69, 831-43.
    • (2001) American Journal of Human Genetics , vol.69 , pp. 831-43
    • Frisse, L.1    Hudson, R.R.2    Bartoszewicz, A.3    Wall, J.D.4    Donfack, J.5    Di Rienzo, A.6
  • 16
    • 0033926130 scopus 로고    scopus 로고
    • Linkage disequilibrium and allele-frequency distributions for 114 single-nucleotide polymorphisms in five populations
    • Goddard K.A.B., Hopkins P.J., Hall J.M., &, Witte J.S., (2000) Linkage disequilibrium and allele-frequency distributions for 114 single-nucleotide polymorphisms in five populations. American Journal of Human Genetics 66, 216-34.
    • (2000) American Journal of Human Genetics , vol.66 , pp. 216-34
    • Goddard, K.A.B.1    Hopkins, P.J.2    Hall, J.M.3    Witte, J.S.4
  • 17
    • 0242500969 scopus 로고    scopus 로고
    • Novel multilocus measure of linkage disequilibrium to estimate past effective population size
    • Hayes B.J., Visscher P.M., McPartlan H.C., &, Goddard M.E., (2003) Novel multilocus measure of linkage disequilibrium to estimate past effective population size. Genome Research 13, 635-43.
    • (2003) Genome Research , vol.13 , pp. 635-43
    • Hayes, B.J.1    Visscher, P.M.2    McPartlan, H.C.3    Goddard, M.E.4
  • 18
    • 26444519053 scopus 로고    scopus 로고
    • Extent and consistency across generations of linkage disequilibrium in commercial layer chicken breeding populations
    • Heifetz E.M., Fulton J.E., O'Sullivan N., Zhao H., Dekkers J.C.M., &, Soller M., (2005) Extent and consistency across generations of linkage disequilibrium in commercial layer chicken breeding populations. Genetics 171, 1173-81.
    • (2005) Genetics , vol.171 , pp. 1173-81
    • Heifetz, E.M.1    Fulton, J.E.2    O'sullivan, N.3    Zhao, H.4    Dekkers, J.C.M.5    Soller, M.6
  • 19
    • 0019771734 scopus 로고
    • Estimation of Effective Population-Size from Data on Linkage Disequilibrium
    • Hill W.G., (1981) Estimation of Effective Population-Size from Data on Linkage Disequilibrium. Genetical Research 38, 209-16.
    • (1981) Genetical Research , vol.38 , pp. 209-16
    • Hill, W.G.1
  • 22
    • 0021909851 scopus 로고
    • The sampling distribution of linkage disequilibrium under an infinite allele model without selection
    • Hudson R.R., (1985) The sampling distribution of linkage disequilibrium under an infinite allele model without selection. Genetics 109, 611-31.
    • (1985) Genetics , vol.109 , pp. 611-31
    • Hudson, R.R.1
  • 25
    • 0001173410 scopus 로고
    • Inbreeding and the inheritance of fertility in the thoroughbred mare
    • Mahon G.A.T., &, Cunningham E.P., (1982) Inbreeding and the inheritance of fertility in the thoroughbred mare. Livestock Production Science 9, 743-54.
    • (1982) Livestock Production Science , vol.9 , pp. 743-54
    • Mahon, G.A.T.1    Cunningham, E.P.2
  • 26
    • 70349956433 scopus 로고    scopus 로고
    • Finding the missing heritability of complex diseases
    • Manolio T.A., Collins F.S., Cox N.J., etal. (2009) Finding the missing heritability of complex diseases. Nature 461, 747-53.
    • (2009) Nature , vol.461 , pp. 747-53
    • Manolio, T.A.1    Collins, F.S.2    Cox, N.J.3
  • 28
    • 77949826087 scopus 로고    scopus 로고
    • Accuracy of breeding values of 'unrelated' individuals predicted by dense SNP genotyping
    • Meuwissen T.H.E., (2009) Accuracy of breeding values of 'unrelated' individuals predicted by dense SNP genotyping. Genetics Selection Evolution 41, 35.
    • (2009) Genetics Selection Evolution , vol.41 , pp. 35
    • Meuwissen, T.H.E.1
  • 29
    • 0035045051 scopus 로고    scopus 로고
    • Prediction of total genetic value using genome-wide dense marker maps
    • Meuwissen T.H.E., Hayes B.J., &, Goddard M.E., (2001) Prediction of total genetic value using genome-wide dense marker maps. Genetics 157, 1819-29.
    • (2001) Genetics , vol.157 , pp. 1819-29
    • Meuwissen, T.H.E.1    Hayes, B.J.2    Goddard, M.E.3
  • 30
    • 45549097981 scopus 로고    scopus 로고
    • Review of the initial validation and characterization of a 3K chicken SNP array
    • Muir W.M., Wong G.K., Zhang Y., etal. (2008) Review of the initial validation and characterization of a 3K chicken SNP array. World's Poultry Science Journal 64, 219-26.
    • (2008) World's Poultry Science Journal , vol.64 , pp. 219-26
    • Muir, W.M.1    Wong, G.K.2    Zhang, Y.3
  • 32
    • 34548292504 scopus 로고    scopus 로고
    • PLINK: A tool set for whole-genome association and population-based linkage analyses
    • Purcell S., Neale B., Todd-Brown K., etal. (2007) PLINK: A tool set for whole-genome association and population-based linkage analyses. The American Journal of Human Genetics 81, 559-75.
    • (2007) The American Journal of Human Genetics , vol.81 , pp. 559-75
    • Purcell, S.1    Neale, B.2    Todd-Brown, K.3
  • 35
    • 52049096371 scopus 로고    scopus 로고
    • Linkage disequilibrium and persistence of phase in Holstein-Friesian, Jersey and Angus Cattle
    • De Roos A.P.W., Hayes B.J., Spelman R.J., &, Goddard M.E., (2008) Linkage disequilibrium and persistence of phase in Holstein-Friesian, Jersey and Angus Cattle. Genetics 179, 1503-12.
    • (2008) Genetics , vol.179 , pp. 1503-12
    • De Roos, A.P.W.1    Hayes, B.J.2    Spelman, R.J.3    Goddard, M.E.4
  • 37
    • 0015070635 scopus 로고
    • Linkage disequilibrium and homozygosity of chromosome segments in finite populations
    • Sved J.A., (1971) Linkage disequilibrium and homozygosity of chromosome segments in finite populations. Theoretical Population Biology 2, 125-41.
    • (1971) Theoretical Population Biology , vol.2 , pp. 125-41
    • Sved, J.A.1
  • 38
    • 29344431641 scopus 로고    scopus 로고
    • Single linkage group per chromosome genetic linkage map for the horse, based on two-three-generation, full-sibling, crossbred horse reference families
    • Swinburne J.E., Boursnell M., Hill G., etal. (2006) Single linkage group per chromosome genetic linkage map for the horse, based on two-three-generation, full-sibling, crossbred horse reference families. Genomics 87, 1-29.
    • (2006) Genomics , vol.87 , pp. 1-29
    • Swinburne, J.E.1    Boursnell, M.2    Hill, G.3
  • 40
    • 34249818758 scopus 로고    scopus 로고
    • The extent of linkage disequilibrium in a large cattle population of western Africa and its consequences for association studies
    • Thévenon S., Dayo G.K., Sylla S., Sidibe I., Berthier D., Legros H., Boichard D., Eggen A., &, Gautier M., (2007) The extent of linkage disequilibrium in a large cattle population of western Africa and its consequences for association studies. Animal Genetics 38, 277-86.
    • (2007) Animal Genetics , vol.38 , pp. 277-86
    • Thévenon, S.1    Dayo, G.K.2    Sylla, S.3    Sidibe, I.4    Berthier, D.5    Legros, H.6    Boichard, D.7    Eggen, A.8    Gautier, M.9
  • 42
    • 14744282767 scopus 로고    scopus 로고
    • Prospects for whole genome linkage disequilibrium mapping in thoroughbreds
    • Tozaki T., Hirota K., Hasegawa T., Tomita M., &, Kurosawa M., (2005) Prospects for whole genome linkage disequilibrium mapping in thoroughbreds. Gene 346, 127-32.
    • (2005) Gene , vol.346 , pp. 127-32
    • Tozaki, T.1    Hirota, K.2    Hasegawa, T.3    Tomita, M.4    Kurosawa, M.5
  • 44
    • 70449379045 scopus 로고    scopus 로고
    • Genome sequence, comparative analysis, and population genetics of the domestic horse
    • Wade C.M., Giulotto E., Sigurdsson S., etal. (2009) Genome sequence, comparative analysis, and population genetics of the domestic horse. Science 326, 865-7.
    • (2009) Science , vol.326 , pp. 865-7
    • Wade, C.M.1    Giulotto, E.2    Sigurdsson, S.3
  • 47
    • 0034035748 scopus 로고    scopus 로고
    • Predicting rates of inbreeding in populations undergoing selection
    • Woolliams J.A., &, Bijma P., (2000) Predicting rates of inbreeding in populations undergoing selection. Genetics 154, 1851-64.
    • (2000) Genetics , vol.154 , pp. 1851-64
    • Woolliams, J.A.1    Bijma, P.2
  • 48
    • 26444599671 scopus 로고    scopus 로고
    • Evaluation of linkage disequilibrium measures between multi-allelic markers as predictors of linkage disequilibrium between markers and QTL
    • Zhao H., Nettleton D., Soller M., &, Dekkers J.C.M., (2005) Evaluation of linkage disequilibrium measures between multi-allelic markers as predictors of linkage disequilibrium between markers and QTL. Genetical Research 86, 77-87.
    • (2005) Genetical Research , vol.86 , pp. 77-87
    • Zhao, H.1    Nettleton, D.2    Soller, M.3    Dekkers, J.C.M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.