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Volumn 22, Issue 6, 2010, Pages 779-783

High-quality RNA preparation for cDNA library construction of the Antarctic sea-ice alga Chlamydomonas sp. ICE-L

Author keywords

cDNA library construction; Chlamydomonas sp. ICE L; Lauryl sodium sulfate (SDS); RNA extraction; Sea ice alga

Indexed keywords

ALGAE; CHLAMYDOMONAS; CHLAMYDOMONAS SP. ICE-L; CHLOROPHYTA;

EID: 78449260523     PISSN: 09218971     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10811-010-9519-5     Document Type: Article
Times cited : (6)

References (27)
  • 1
    • 1542529100 scopus 로고    scopus 로고
    • Isolation of high quality DNA and RNA from leaves of the carnivorous plant Drosera rotundifolia
    • Bekesiova I, Nap JP, Mlynarova L (1999) Isolation of high quality DNA and RNA from leaves of the carnivorous plant Drosera rotundifolia. Plant Mol Biol Reptr 17: 269-277.
    • (1999) Plant Mol Biol Reptr , vol.17 , pp. 269-277
    • Bekesiova, I.1    Nap, J.P.2    Mlynarova, L.3
  • 2
    • 0023277545 scopus 로고
    • Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction
    • Chomczynski P, Sacchi N (1987) Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem 162: 156-159.
    • (1987) Anal Biochem , vol.162 , pp. 156-159
    • Chomczynski, P.1    Sacchi, N.2
  • 3
    • 0030046597 scopus 로고    scopus 로고
    • A reliable method for extraction of RNA from various conifer tissues
    • Dong JZ, Dunstan DI (1996) A reliable method for extraction of RNA from various conifer tissues. Plant Cell Rep 15: 516-521.
    • (1996) Plant Cell Rep , vol.15 , pp. 516-521
    • Dong, J.Z.1    Dunstan, D.I.2
  • 4
    • 18944378997 scopus 로고    scopus 로고
    • RNA extraction from different apple tissues rich in polyphenols and polysaccharides for cDNA library construction
    • Gasic K, Hernandez A, Korban SS (2004) RNA extraction from different apple tissues rich in polyphenols and polysaccharides for cDNA library construction. Plant Mol Biol Reptr 22: 437a-437g.
    • (2004) Plant Mol Biol Reptr , vol.22
    • Gasic, K.1    Hernandez, A.2    Korban, S.S.3
  • 5
    • 0032364836 scopus 로고    scopus 로고
    • A new method for rapid extraction of high quality RNA from recalcitrant tissues of grapevine
    • Geuna F, Hartings H, Scienza A (1998) A new method for rapid extraction of high quality RNA from recalcitrant tissues of grapevine. Plant Mol Biol Reptr 16: 61-67.
    • (1998) Plant Mol Biol Reptr , vol.16 , pp. 61-67
    • Geuna, F.1    Hartings, H.2    Scienza, A.3
  • 6
    • 34548483902 scopus 로고    scopus 로고
    • Annotation and expression profile analysis of cDNAs from the Antarctic diatom Chaetoceros neogracile
    • Gyeongseo J, Lee CG, Kang SH, Jin E (2007) Annotation and expression profile analysis of cDNAs from the Antarctic diatom Chaetoceros neogracile. J Microbiol Biotechnol 17: 1330-1337.
    • (2007) J Microbiol Biotechnol , vol.17 , pp. 1330-1337
    • Gyeongseo, J.1    Lee, C.G.2    Kang, S.H.3    Jin, E.4
  • 7
    • 38649091348 scopus 로고    scopus 로고
    • Transcriptome analysis of acclimatory responses to thermal stress in Antarctic algae
    • Hwang YS, Jung G, Jin E (2008) Transcriptome analysis of acclimatory responses to thermal stress in Antarctic algae. Biochem Biophys Res Commun 367: 635-641.
    • (2008) Biochem Biophys Res Commun , vol.367 , pp. 635-641
    • Hwang, Y.S.1    Jung, G.2    Jin, E.3
  • 9
    • 33645503288 scopus 로고    scopus 로고
    • Ice-binding proteins from sea ice diatoms (Bacillariophyceae)
    • Janech MG, Krell A, Mock T, Kang JS, Raymond JA (2006) Ice-binding proteins from sea ice diatoms (Bacillariophyceae). J Phycol 42: 410-416.
    • (2006) J Phycol , vol.42 , pp. 410-416
    • Janech, M.G.1    Krell, A.2    Mock, T.3    Kang, J.S.4    Raymond, J.A.5
  • 10
    • 34548483902 scopus 로고    scopus 로고
    • Annotation and expression profile analysis of cDNAs from the Antarctic diatom Chaetoceros neogracile
    • Jung G, Lee CG, Kang SH, Jin E (2007) Annotation and expression profile analysis of cDNAs from the Antarctic diatom Chaetoceros neogracile. J Microbiol Biotechnol 17: 1330-1337.
    • (2007) J Microbiol Biotechnol , vol.17 , pp. 1330-1337
    • Jung, G.1    Lee, C.G.2    Kang, S.H.3    Jin, E.4
  • 11
    • 77049123778 scopus 로고    scopus 로고
    • RNA isolation for cDNA library construction from the reindeer lichen Cladonia rangiferina
    • doi:10.1186/1756-0500-2-204
    • Junttila S, Lim KJ, Rudd S (2009) RNA isolation for cDNA library construction from the reindeer lichen Cladonia rangiferina. BMC Research Notes 2: 204. doi: 10. 1186/1756-0500-2-204.
    • (2009) BMC Research Notes , vol.2 , pp. 204
    • Junttila, S.1    Lim, K.J.2    Rudd, S.3
  • 13
    • 3242828686 scopus 로고    scopus 로고
    • A simple method for RNA extraction from marine macroalgae
    • Kim SH, Lee YK, Hong CB, Lee IK (1997) A simple method for RNA extraction from marine macroalgae. Algae 12: 53-56.
    • (1997) Algae , vol.12 , pp. 53-56
    • Kim, S.H.1    Lee, Y.K.2    Hong, C.B.3    Lee, I.K.4
  • 14
    • 33644934394 scopus 로고    scopus 로고
    • Phylogenetic studies on two strains of Antarctic ice algae based on morphological and molecular characteristics
    • Liu CL, Huang XH, Wang XL, Zhang XC, Li GY (2006) Phylogenetic studies on two strains of Antarctic ice algae based on morphological and molecular characteristics. Phycologia 45: 190-198.
    • (2006) Phycologia , vol.45 , pp. 190-198
    • Liu, C.L.1    Huang, X.H.2    Wang, X.L.3    Zhang, X.C.4    Li, G.Y.5
  • 15
    • 78449252791 scopus 로고    scopus 로고
    • Studies on biochemical composition of Antarctic ice-microalgae and its relation to the cold acclimation
    • Miao JL, Shi HQ, Jiang YH, Zhang BT, Hou XG (2002) Studies on biochemical composition of Antarctic ice-microalgae and its relation to the cold acclimation. Adv Mar Sci 20: 43-50.
    • (2002) Advances in Marine Science , vol.20 , pp. 43-50
    • Miao, J.L.1    Shi, H.Q.2    Jiang, Y.H.3    Zhang, B.T.4    Hou, X.G.5
  • 16
    • 33745248711 scopus 로고    scopus 로고
    • Changes of the Antarctic alga exposed to UV2B in configuration and ultrastructure as well as main biochemical composition
    • Miao JL, Kan GF, Li GY (2003) Changes of the Antarctic alga exposed to UV2B in configuration and ultrastructure as well as main biochemical composition. Chinese J Marine Drugs 6: 1-5.
    • (2003) Chinese Jounrnal of Marine Drugs , vol.6 , pp. 1-5
    • Miao, J.L.1    Kan, G.F.2    Li, G.Y.3
  • 17
    • 17844400955 scopus 로고    scopus 로고
    • Recent advances in sea-ice microbiology
    • Mock T, Thomas DN (2005) Recent advances in sea-ice microbiology. Environ Microbiol 7: 605-619.
    • (2005) Environ Microbiol , vol.7 , pp. 605-619
    • Mock, T.1    Thomas, D.N.2
  • 18
    • 33645216581 scopus 로고    scopus 로고
    • Analysis of expressed sequence tags (ESTs) from the polar diatom Fragilariopsis cylindrus
    • Mock T, Krell A, Glockner G, Kolukisaoglu U, Valentin K (2005) Analysis of expressed sequence tags (ESTs) from the polar diatom Fragilariopsis cylindrus. J Phycol 42: 78-85.
    • (2005) J Phycol , vol.42 , pp. 78-85
    • Mock, T.1    Krell, A.2    Glockner, G.3    Kolukisaoglu, U.4    Valentin, K.5
  • 19
    • 69049106519 scopus 로고    scopus 로고
    • Analysis of current and alternative phenol based RNA extraction methodologies for cyanobacteria
    • Pinto FL, Thapper A, Sontheim W, Lindblad P (2009) Analysis of current and alternative phenol based RNA extraction methodologies for cyanobacteria. BMC Mol Biol 10: 79-86.
    • (2009) BMC Mol Biol , vol.10 , pp. 79-86
    • Pinto, F.L.1    Thapper, A.2    Sontheim, W.3    Lindblad, P.4
  • 20
    • 0002733010 scopus 로고
    • Media and prospects for the cultivation of marine algae
    • Provasolil, In: Watanabe A, Hattori A (eds), Proceeding of the U. S., Japan Conference, Hakone. Japanese Society of Plant Physiology
    • Provasolil (1968) Media and prospects for the cultivation of marine algae. In: Watanabe A, Hattori A (eds) Cultures and collections of algae. Proceeding of the U. S., Japan Conference, Hakone. Japanese Society of Plant Physiology, pp 63-75.
    • (1968) Cultures and collections of algae , pp. 63-75
  • 21
    • 0024118796 scopus 로고
    • A method for RNA isolation from marine macro-algae
    • Su X, Gibor A (1988) A method for RNA isolation from marine macro-algae. Anal Biochem 174: 650-657.
    • (1988) Anal Biochem , vol.174 , pp. 650-657
    • Su, X.1    Gibor, A.2
  • 22
    • 70350574145 scopus 로고    scopus 로고
    • Rapid and effective method of RNA isolation from green microalga Ankistrodesmus convolutus
    • Thanh T, Omar H, Abdullah MP, Chi VTQ, Noroozi M, Ky H, Napis S (2009) Rapid and effective method of RNA isolation from green microalga Ankistrodesmus convolutus. Mol Biotechnol 43: 148-153.
    • (2009) Mol Biotechnol , vol.43 , pp. 148-153
    • Thanh, T.1    Omar, H.2    Abdullah, M.P.3    Chi, V.T.Q.4    Noroozi, M.5    Ky, H.6    Napis, S.7
  • 23
    • 38649112329 scopus 로고    scopus 로고
    • RNA isolation method for polysaccharide rich algae: Agar producing Gracilaria tenuistipitata (Rhodophyta)
    • Vanessa DRF, Angela PT, Mariana CO, Pio C (2008) RNA isolation method for polysaccharide rich algae: agar producing Gracilaria tenuistipitata (Rhodophyta). J Appl Phycol 20: 9-12.
    • (2008) J Appl Phycol , vol.20 , pp. 9-12
    • Vanessa, D.R.F.1    Angela, P.T.2    Mariana, C.O.3    Pio, C.4
  • 24
    • 62949239180 scopus 로고    scopus 로고
    • Improved RNA isolation from Laminaria japonica Aresch (Laminariaceae, Phaeophyta)
    • Yao JT, Fu WD, Wang XL, Duan DL (2009) Improved RNA isolation from Laminaria japonica Aresch (Laminariaceae, Phaeophyta). J Appl Phycol 21: 233-238.
    • (2009) J Appl Phycol , vol.21 , pp. 233-238
    • Yao, J.T.1    Fu, W.D.2    Wang, X.L.3    Duan, D.L.4
  • 25
    • 1442357095 scopus 로고    scopus 로고
    • RNA isolation from high viscous samples rich in polyphenols and polysaccharides
    • Zeng Y, Yang T (2002) RNA isolation from high viscous samples rich in polyphenols and polysaccharides. Plant Molecular Reporter 20: 417a-417e.
    • (2002) Plant Molecular Reporter , vol.20
    • Zeng, Y.1    Yang, T.2
  • 26
    • 6344221872 scopus 로고    scopus 로고
    • Insights into the survival of Chlamydomonas reinhardtii during sulfur starvation based on microarray analysis of gene expression
    • Zhang ZD, Shrager J, Jain M, Chang CW, Vallon O, Grossman AR (2004) Insights into the survival of Chlamydomonas reinhardtii during sulfur starvation based on microarray analysis of gene expression. Eukaryotic Cell 3(5): 1331-1348.
    • (2004) Eukaryotic Cell , vol.3 , Issue.5 , pp. 1331-1348
    • Zhang, Z.D.1    Shrager, J.2    Jain, M.3    Chang, C.W.4    Vallon, O.5    Grossman, A.R.6
  • 27
    • 78449241174 scopus 로고    scopus 로고
    • Effects of temperature, salinity and illumination on the growth of Thalassiasira sp
    • Zhu M, Zhang XC, Mao YX, Yan BL, Teng YJ, Lu ZH (2003) Effects of temperature, salinity and illumination on the growth of Thalassiasira sp. Mar Sci 27(12): 58-61.
    • (2003) Mar Sci , vol.27 , Issue.12 , pp. 58-61
    • Zhu, M.1    Zhang, X.C.2    Mao, Y.X.3    Yan, B.L.4    Teng, Y.J.5    Lu, Z.H.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.