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Volumn 1, Issue 3, 2009, Pages 390-399

The mammalian phenotype ontology: Enabling robust annotation and comparative analysis

Author keywords

[No Author keywords available]

Indexed keywords

ANIMALIA; MAMMALIA; MUS; RATTUS;

EID: 78249235739     PISSN: 19395094     EISSN: 1939005X     Source Type: Journal    
DOI: 10.1002/wsbm.44     Document Type: Article
Times cited : (250)

References (28)
  • 1
    • 24944439196 scopus 로고    scopus 로고
    • N-ethyl-N-nitrosourea mutagenesis: boarding the mouse mutant express
    • Cordes SP. N-ethyl-N-nitrosourea mutagenesis: boarding the mouse mutant express. Microbiol Mol Biol Rev 2005, 69(3):426-439.
    • (2005) Microbiol Mol Biol Rev , vol.69 , Issue.3 , pp. 426-439
    • Cordes, S.P.1
  • 2
    • 9944236320 scopus 로고    scopus 로고
    • Large-scale mutagenesis of the mouse to understand the genetic bases of nervous system structure and function
    • Goldowitz D, Frankel WN, Takahashi JS, Holtz-Vitaterna M, Bult C, et al. Large-scale mutagenesis of the mouse to understand the genetic bases of nervous system structure and function. Brain Res Mol Brain Res 2004, 132(2):105-115.
    • (2004) Brain Res Mol Brain Res , vol.132 , Issue.2 , pp. 105-115
    • Goldowitz, D.1    Frankel, W.N.2    Takahashi, J.S.3    Holtz-Vitaterna, M.4    Bult, C.5
  • 3
    • 0032565508 scopus 로고    scopus 로고
    • Large scale ENU screens in themouse: genetics meets genomics
    • Hrabé deAngelisM, BallingR. Large scale ENU screens in themouse: genetics meets genomics. Mutat Res 1998, 400(1-2):25-32.
    • (1998) Mutat Res , vol.400 , Issue.1-2 , pp. 25-32
    • Hrabé de Angelis, M.1    Balling, R.2
  • 4
    • 0035895501 scopus 로고    scopus 로고
    • International Mouse Mutagenesis Consortium: Sequence interpretation. Functional annotation of mouse genome sequences
    • Nadeau JH, Balling R, Barsh G, Beier D, Brown SD, et al. International Mouse Mutagenesis Consortium: Sequence interpretation. Functional annotation of mouse genome sequences. Science 2001, 291(5507):1251-1255.
    • (2001) Science , vol.291 , Issue.5507 , pp. 1251-1255
    • Nadeau, J.H.1    Balling, R.2    Barsh, G.3    Beier, D.4    Brown, S.D.5
  • 6
    • 4444242995 scopus 로고    scopus 로고
    • The European dimension for the mouse genome mutagenesis program
    • Auwerx J, Avner P, Baldock R, Ballabio A, Balling R, et al. The European dimension for the mouse genome mutagenesis program. Nat Genet 2004, 36(9):925-927.
    • (2004) Nat Genet , vol.36 , Issue.9 , pp. 925-927
    • Auwerx, J.1    Avner, P.2    Baldock, R.3    Ballabio, A.4    Balling, R.5
  • 7
    • 34147143094 scopus 로고    scopus 로고
    • A new partner for the international knockout mouse consortium
    • Collins FS, Finnell RH, Rossant J, Wurst W. A new partner for the international knockout mouse consortium. Cell 2007, 129(2):235.
    • (2007) Cell , vol.129 , Issue.2 , pp. 235
    • Collins, F.S.1    Finnell, R.H.2    Rossant, J.3    Wurst, W.4
  • 8
    • 77954507335 scopus 로고    scopus 로고
    • International Mouse Knockout Consortium. A mouse for all reasons
    • Collins FS, Rossant J, Wurst W, International Mouse Knockout Consortium. A mouse for all reasons. Cell 2007, 128(1):9-13.
    • (2007) Cell , vol.128 , Issue.1 , pp. 9-13
    • Collins, F.S.1    Rossant, J.2    Wurst, W.3
  • 9
    • 58749086057 scopus 로고    scopus 로고
    • The Gene Ontology (GO) project: structured vocabularies for molecular biology and their application to genome and expression analysis
    • Blake JA, Harris MA. The Gene Ontology (GO) project: structured vocabularies for molecular biology and their application to genome and expression analysis. Curr Protoc Bioinformatics 2008, 23:7.2:1:7.2.9.
    • (2008) Curr Protoc Bioinformatics , vol.23 , Issue.7
    • Blake, J.A.1    Harris, M.A.2
  • 10
    • 32644456040 scopus 로고    scopus 로고
    • The AdultMouse Anatomical Dictionary: a tool for annotating and integrating data
    • Hayamizu TF, Mangan M, Corradi JP, Kadin JA, Ringwald M.The AdultMouse Anatomical Dictionary: a tool for annotating and integrating data. Genome Biol 2005, 6(3):R29.
    • (2005) Genome Biol , vol.6 , Issue.3
    • Hayamizu, T.F.1    Mangan, M.2    Corradi, J.P.3    Kadin, J.A.4    Ringwald, M.5
  • 12
    • 1542290452 scopus 로고    scopus 로고
    • Ontologies in biology: design, applications and future challenges
    • Bard JB, Rhee SY. Ontologies in biology: design, applications and future challenges. Nat Rev Genet 2004, 5(3):213-222.
    • (2004) Nat Rev Genet , vol.5 , Issue.3 , pp. 213-222
    • Bard, J.B.1    Rhee, S.Y.2
  • 13
    • 26844450908 scopus 로고    scopus 로고
    • The Mammalian Phenotype Ontology as a tool for annotating, analyzing and comparing phenotypic information
    • Smith CL, Goldsmith CA, Eppig JT. The Mammalian Phenotype Ontology as a tool for annotating, analyzing and comparing phenotypic information. Genome Biol 2005, 6(1):R7.
    • (2005) Genome Biol , vol.6 , Issue.1
    • Smith, C.L.1    Goldsmith, C.A.2    Eppig, J.T.3
  • 14
    • 34548595489 scopus 로고    scopus 로고
    • Gene Ontology OBO-Edit Working Group, Lewis S. OBO-Edit-an ontology editor for biologists
    • Day-Richter J, Harris MA, Haendel M, Gene Ontology OBO-Edit Working Group, Lewis S. OBO-Edit-an ontology editor for biologists. Bioinformatics 2007, 23(16):2198-2200.
    • (2007) Bioinformatics , vol.23 , Issue.16 , pp. 2198-2200
    • Day-Richter, J.1    Harris, M.A.2    Haendel, M.3
  • 15
    • 35948989284 scopus 로고    scopus 로고
    • OBI Consortium. The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration
    • Smith B, Ashburner M, Rosse C, Bard J, Bug W, et al., OBI Consortium. The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat Biotechnol 2007, 25(11):1251-1255.
    • (2007) Nat Biotechnol , vol.25 , Issue.11 , pp. 1251-1255
    • Smith, B.1    Ashburner, M.2    Rosse, C.3    Bard, J.4    Bug, W.5
  • 19
    • 84954358609 scopus 로고    scopus 로고
    • The human phenotype ontology: a tool for annotating and analyzing human hereditary disease
    • Robinson PN, Köhler S, Bauer S, Seelow D, Horn D, et al. The human phenotype ontology: a tool for annotating and analyzing human hereditary disease. Am J Hum Genet. 2008, 83(5):610-615.
    • (2008) Am J Hum Genet , vol.83 , Issue.5 , pp. 610-615
    • Robinson, P.N.1    Köhler, S.2    Bauer, S.3    Seelow, D.4    Horn, D.5
  • 21
    • 43849096072 scopus 로고    scopus 로고
    • Transcriptome analysis identifies pathways associated with enhanced maternal performance in QSi5 mice
    • Ramanathan P, Martin IC, Gardiner-Garden M, Thomson PC, Taylor RM, et al. Transcriptome analysis identifies pathways associated with enhanced maternal performance in QSi5 mice. BMC Genomics 2008, 9:197.
    • (2008) BMC Genomics , vol.9 , pp. 197
    • Ramanathan, P.1    Martin, I.C.2    Gardiner-Garden, M.3    Thomson, P.C.4    Taylor, R.M.5
  • 22
    • 40549136002 scopus 로고    scopus 로고
    • Reduced body weight is a common effect of gene knockout in mice
    • Reed DR, Lawler MP, Tordoff MG. Reduced body weight is a common effect of gene knockout in mice. BMC Genet 2008, 9:4.
    • (2008) BMC Genet , vol.9 , pp. 4
    • Reed, D.R.1    Lawler, M.P.2    Tordoff, M.G.3
  • 23
    • 34447313402 scopus 로고    scopus 로고
    • An integrative genomics strategy for systematic characterization of genetic loci modulating phenotypes
    • Bao L, Peirce JL, Zhou M, Li H, Goldowitz D, et al. An integrative genomics strategy for systematic characterization of genetic loci modulating phenotypes. Hum Mol Genet. 2007, 16(11):1381-1390.
    • (2007) Hum Mol Genet , vol.16 , Issue.11 , pp. 1381-1390
    • Bao, L.1    Peirce, J.L.2    Zhou, M.3    Li, H.4    Goldowitz, D.5
  • 24
    • 38049136610 scopus 로고    scopus 로고
    • Improved human disease candidate gene prioritization using mouse phenotype
    • Chen J, Xu H, Aronow BJ, Jegga AG. Improved human disease candidate gene prioritization using mouse phenotype. BMC Bioinformatics 2007, 8:392.
    • (2007) BMC Bioinformatics , vol.8 , pp. 392
    • Chen, J.1    Xu, H.2    Aronow, B.J.3    Jegga, A.G.4
  • 25
    • 38549174065 scopus 로고    scopus 로고
    • Mouse Genome Database Group. The Mouse Genome Database (MGD): mouse biology and model systems
    • Bult CJ, Eppig JT, Kadin JA, Richardson JE, Blake JA, Mouse Genome Database Group. The Mouse Genome Database (MGD): mouse biology and model systems. Nucleic Acids Res. 2008, 36(Database issue):D724-D728.
    • (2008) Nucleic Acids Res , vol.36 , Issue.DATABASE ISSUE
    • Bult, C.J.1    Eppig, J.T.2    Kadin, J.A.3    Richardson, J.E.4    Blake, J.A.5
  • 26
    • 33846111969 scopus 로고    scopus 로고
    • RGD Team. The Rat Genome Database, update 2007-easing the path from disease to data and back again
    • Twigger SN, Shimoyama M, Bromberg S, Kwitek AE, Jacob HJ, RGD Team. The Rat Genome Database, update 2007-easing the path from disease to data and back again. Nucleic Acids Res 2007, 35(Database issue):D658-D662.
    • (2007) Nucleic Acids Res , vol.35 , Issue.DATABASE ISSUE
    • Twigger, S.N.1    Shimoyama, M.2    Bromberg, S.3    Kwitek, A.E.4    Jacob, H.J.5
  • 27
    • 33644874797 scopus 로고    scopus 로고
    • OMIA (Online Mendelian Inheritance in Animals): an enhanced platform and integration into the Entrez search interface at NCBI
    • Lenffer J, Nicholas FW, Castle K, Rao A, Gregory S, et al. OMIA (Online Mendelian Inheritance in Animals): an enhanced platform and integration into the Entrez search interface at NCBI. Nucleic Acids Res 2006, 34(Database issue):D599-D601.
    • (2006) Nucleic Acids Res , vol.34 , Issue.DATABASE ISSUE
    • Lenffer, J.1    Nicholas, F.W.2    Castle, K.3    Rao, A.4    Gregory, S.5
  • 28
    • 38549105490 scopus 로고    scopus 로고
    • EuroPhenome and EMPReSS: onlinemouse phenotyping resource
    • Mallon AM, Blake A, Hancock JM. EuroPhenome and EMPReSS: onlinemouse phenotyping resource. Nucleic Acids Res 2008, 36(Database issue):D715-D718.
    • (2008) Nucleic Acids Res , vol.36 , Issue.DATABASE ISSUE
    • Mallon, A.M.1    Blake, A.2    Hancock, J.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.