-
1
-
-
51549104956
-
Molecular plant breeding as the foundation for 21st century crop improvement
-
Moose SP, Mumm RH (2008) Molecular plant breeding as the foundation for 21st century crop improvement. Plant Physiol 147: 969-77.
-
(2008)
Plant Physiol
, vol.147
, pp. 969-977
-
-
Moose, S.P.1
Mumm, R.H.2
-
2
-
-
84907150192
-
The map-based sequence of the rice genome
-
International Rice Genome Sequencing Project
-
International Rice Genome Sequencing Project. (2005) The map-based sequence of the rice genome. Nature 436: 793-800.
-
(2005)
Nature
, vol.436
, pp. 793-800
-
-
-
3
-
-
70450202132
-
The B73 maize genome: Complexity, diversity, and dynamics
-
Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, et al. (2009) The B73 maize genome: complexity, diversity, and dynamics. Science 326: 1112-1115.
-
(2009)
Science
, vol.326
, pp. 1112-1115
-
-
Schnable, P.S.1
Ware, D.2
Fulton, R.S.3
Stein, J.C.4
Wei, F.5
-
4
-
-
58449137410
-
The Sorghum bicolor genome and the diversification of grasses
-
Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, et al. (2009) The Sorghum bicolor genome and the diversification of grasses. Nature 457: 551-556.
-
(2009)
Nature
, vol.457
, pp. 551-556
-
-
Paterson, A.H.1
Bowers, J.E.2
Bruggmann, R.3
Dubchak, I.4
Grimwood, J.5
-
5
-
-
33846936303
-
Comparison of orthologous loci from small grass genomes Brachypodium and rice: Implications for wheat genomics and grass genome annotation
-
Bossolini E, Wicker T, Knobel PA, Keller B (2007) Comparison of orthologous loci from small grass genomes Brachypodium and rice: implications for wheat genomics and grass genome annotation. Plant J 49: 704-717.
-
(2007)
Plant J
, vol.49
, pp. 704-717
-
-
Bossolini, E.1
Wicker, T.2
Knobel, P.A.3
Keller, B.4
-
6
-
-
32544454998
-
Molecular characterization of Ph1 as a major chromosome pairing locus in polyploidy wheat
-
Griffiths S, Sharp R, Foote TN, Bertin I, Wanous M, et al. (2006) Molecular characterization of Ph1 as a major chromosome pairing locus in polyploidy wheat. Nature 439: 749-752.
-
(2006)
Nature
, vol.439
, pp. 749-752
-
-
Griffiths, S.1
Sharp, R.2
Foote, T.N.3
Bertin, I.4
Wanous, M.5
-
7
-
-
76749150030
-
Genome Sequencing and Analysis of the model grass Brachypodium distachyon
-
International Brachypodium Initiative
-
International Brachypodium Initiative (2010) Genome Sequencing and Analysis of the model grass Brachypodium distachyon. Nature 463: 763-768.
-
(2010)
Nature
, vol.463
, pp. 763-768
-
-
-
8
-
-
0032990408
-
A complete BACbased physical map of the Arabidopsis thaliana genome
-
Mozo T, Dewar K, Dunn P, Ecker JR, Fischer S, et al. (1999) A complete BACbased physical map of the Arabidopsis thaliana genome. Nature Genetics 22: 271-275.
-
(1999)
Nature Genetics
, vol.22
, pp. 271-275
-
-
Mozo, T.1
Dewar, K.2
Dunn, P.3
Ecker, J.R.4
Fischer, S.5
-
9
-
-
7944222317
-
Genome physical mapping with large-insert bacterial clones by fingerprint analysis: Methodologies, source clone genome coverage, and contig map quality
-
Xu ZY, Sun SK, Covaleda L, Ding K, Zhang AM, et al. (2004) Genome physical mapping with large-insert bacterial clones by fingerprint analysis: methodologies, source clone genome coverage, and contig map quality. Genomics 84: 941-951.
-
(2004)
Genomics
, vol.84
, pp. 941-951
-
-
Xu, Z.Y.1
Sun, S.K.2
Covaleda, L.3
Ding, K.4
Zhang, A.M.5
-
10
-
-
45749147399
-
The first generation of a BAC-based physical map of Brassica rapa
-
12 June
-
Mun J, Kwon S, Yang T, Kim H, Choi B, et al. (2008) The first generation of a BAC-based physical map of Brassica rapa. BMC Genomics 9, 12 June.
-
(2008)
BMC Genomics
, vol.9
-
-
Mun, J.1
Kwon, S.2
Yang, T.3
Kim, H.4
Choi, B.5
-
11
-
-
12444325815
-
High-throughput fingerprinting of bacterial artificial chromosomes using the SNaPshot labeling kit and sizing of restriction fragments by capillary electrophoresis
-
Luo MC, Thomas C, You FM, Hsiao J, Shu OY, et al. (2003) High-throughput fingerprinting of bacterial artificial chromosomes using the SNaPshot labeling kit and sizing of restriction fragments by capillary electrophoresis. Genomics 82: 378-389.
-
(2003)
Genomics
, vol.82
, pp. 378-389
-
-
Luo, M.C.1
Thomas, C.2
You, F.M.3
Hsiao, J.4
Shu, O.Y.5
-
12
-
-
33847043486
-
Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics
-
Huo NX, Gu YQ, Lazo GR, Vogel JP, Coleman-Derr D (2006) Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics. Genome 49: 1099-1108.
-
(2006)
Genome
, vol.49
, pp. 1099-1108
-
-
Huo, N.X.1
Gu, Y.Q.2
Lazo, G.R.3
Vogel, J.P.4
Coleman-Derr, D.5
-
13
-
-
70649103169
-
A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat
-
Gu YQ, Ma Y, Huo N, Vogel JP, You FM (2009) A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat. BMC Genomics 10496.
-
(2009)
BMC Genomics
, pp. 10496
-
-
Gu, Y.Q.1
Ma, Y.2
Huo, N.3
Vogel, J.P.4
You, F.M.5
-
14
-
-
8544273197
-
A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat
-
Qi LL, Echalier B, Chao S, Lazo GR, Butler GE, et al. (2004) A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat. Genetics 168: 701-712.
-
(2004)
Genetics
, vol.168
, pp. 701-712
-
-
Qi, L.L.1
Echalier, B.2
Chao, S.3
Lazo, G.R.4
Butler, G.E.5
-
15
-
-
74849083464
-
An SSR-based genetic linkage map of the model grass Brachypodium distachyon
-
Garvin DF, McKenzie N, Vogel JP, Mockler TC, Blankenheim ZJ, et al. (2010) An SSR-based genetic linkage map of the model grass Brachypodium distachyon. Genome 53: 1-13.
-
(2010)
Genome
, vol.53
, pp. 1-13
-
-
Garvin, D.F.1
McKenzie, N.2
Vogel, J.P.3
Mockler, T.C.4
Blankenheim, Z.J.5
-
16
-
-
42449097595
-
Development of Genetic and Genomic Research Resources for Brachypodium distachyon, a new model system for Grass Crop Research
-
S-69-84
-
Garvin DF, Gu YQ, Hasterok R, Hazen SP, Jenkins G, et al. (2008) Development of Genetic and Genomic Research Resources for Brachypodium distachyon, a new model system for Grass Crop Research. Crop Sci 48: S-69-84.
-
(2008)
Crop Sci
, vol.48
-
-
Garvin, D.F.1
Gu, Y.Q.2
Hasterok, R.3
Hazen, S.P.4
Jenkins, G.5
-
17
-
-
70349587942
-
Comparative cytogenetic analysis of the genomes of the model grass Brachypodium distachyon and its close relatives
-
Wolny E, Hasterok R (2009) Comparative cytogenetic analysis of the genomes of the model grass Brachypodium distachyon and its close relatives. Ann Bot 104: 873-81.
-
(2009)
Ann Bot
, vol.104
, pp. 873-881
-
-
Wolny, E.1
Hasterok, R.2
-
18
-
-
33748260755
-
SyMAP: A system for discovering and viewing syntenic regions of FPC maps
-
Soderlund C, Nelson W, Shoemaker A, Paterson A (2006) SyMAP: A system for discovering and viewing syntenic regions of FPC maps. Genome Res 16: 1159-1168.
-
(2006)
Genome Res
, vol.16
, pp. 1159-1168
-
-
Soderlund, C.1
Nelson, W.2
Shoemaker, A.3
Paterson, A.4
-
19
-
-
58449092050
-
The complete chloroplast genome sequence of Brachypodium distachyon: Sequence comparison and phylogenetic analysis of eight grass plastomes
-
Bortiri E, Coleman-Derr D, Lazo GR, Anderson OD, Gu YQ (2008) The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes. BMC Res Notes 1: 61.
-
(2008)
BMC Res Notes
, vol.1
, pp. 61
-
-
Bortiri, E.1
Coleman-Derr, D.2
Lazo, G.R.3
Anderson, O.D.4
Gu, Y.Q.5
-
20
-
-
33744489394
-
Alignment of the genomes of Brachypodium distachyon and temperate cereals and grasses using bacterial artificial chromosome landing with fluorescence in situ hybridization
-
Hasterok R, Marasek A, Donnison IS, Armstead I, Thomas A, et al. (2006) Alignment of the genomes of Brachypodium distachyon and temperate cereals and grasses using bacterial artificial chromosome landing with fluorescence in situ hybridization. Genetics 173: 349-362.
-
(2006)
Genetics
, vol.173
, pp. 349-362
-
-
Hasterok, R.1
Marasek, A.2
Donnison, I.S.3
Armstead, I.4
Thomas, A.5
-
21
-
-
85056029481
-
Brachypodium distachyon- a new model system for strucutural and functional analysis of grass genomes
-
In: Varshey RK, Koebner RMD, eds., Boca Raton, FL
-
Garvin DF (2007) Brachypodium distachyon- a new model system for strucutural and functional analysis of grass genomes. In: Varshey RK, Koebner RMD, eds. Model Plants and crop improvement Taylor and Francis, Boca Raton, FL. pp 109-124.
-
(2007)
Model Plants and Crop Improvement Taylor and Francis
, pp. 109-124
-
-
Garvin, D.F.1
-
22
-
-
40349093032
-
Agrobacterium-mediated transformation of the temperate grass Brachypodium distachyon (genotype Bd21) for T-DNA insertional mutagenesis
-
Vain P, Worland B, Thole V, McKenzie N, Alves SC, et al. (2008) Agrobacterium-mediated transformation of the temperate grass Brachypodium distachyon (genotype Bd21) for T-DNA insertional mutagenesis. Plant Biotechnology Journal 6: 236-245.
-
(2008)
Plant Biotechnology Journal
, vol.6
, pp. 236-245
-
-
Vain, P.1
Worland, B.2
Thole, V.3
McKenzie, N.4
Alves, S.C.5
-
23
-
-
41549089817
-
High-efficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3
-
Vogel J, Hill T (2008) High-efficiency Agrobacterium-mediated transformation of Brachypodium distachyon inbred line Bd21-3. Plant Cell Reports 27: 471-478.
-
(2008)
Plant Cell Reports
, vol.27
, pp. 471-478
-
-
Vogel, J.1
Hill, T.2
-
24
-
-
30044435245
-
The Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza
-
Ammiraju JSS, Luo MZ, Goicoechea JL, Wang WM, Kudrna D, et al. (2006) The Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza. Genome Research 16: 140-147.
-
(2006)
Genome Research
, vol.16
, pp. 140-147
-
-
Ammiraju, J.S.S.1
Luo, M.Z.2
Goicoechea, J.L.3
Wang, W.M.4
Kudrna, D.5
-
25
-
-
1542548246
-
An improved method for plant BAC library construction
-
Luo MZ, Wing RA (2003) An improved method for plant BAC library construction. Plant Functional Genomics 236: 3-19.
-
(2003)
Plant Functional Genomics
, vol.236
, pp. 3-19
-
-
Luo, M.Z.1
Wing, R.A.2
-
26
-
-
34548588693
-
Comparative Physical Mapping Between Oryza sativa (AA Genome Type) and O. punctata (BB Genome Type)
-
Kim H, San Miguel P, Nelson W, Collura K, Wissotski M, et al. (2007) Comparative Physical Mapping Between Oryza sativa (AA Genome Type) and O. punctata (BB Genome Type). Genetics 176: 379-390.
-
(2007)
Genetics
, vol.176
, pp. 379-390
-
-
Kim, H.1
Miguel, S.P.2
Nelson, W.3
Collura, K.4
Wissotski, M.5
-
27
-
-
0033674122
-
Contigs built with fingerprints, markers, and FPC V4.7
-
Soderlund C, Humphray S, Dunham A, French LC (2000) Contigs built with fingerprints, markers, and FPC V4.7. Genome Res 10: 1772-1787.
-
(2000)
Genome Res
, vol.10
, pp. 1772-1787
-
-
Soderlund, C.1
Humphray, S.2
Dunham, A.3
French, L.C.4
-
29
-
-
0034284437
-
Repbase Update - a database and an electronic journal of repetitive elements
-
Jurka J (2000) Repbase Update - a database and an electronic journal of repetitive elements. Trends Genet 16: 418-420.
-
(2000)
Trends Genet
, vol.16
, pp. 418-420
-
-
Jurka, J.1
-
30
-
-
0346494835
-
The TIGR Plant Repeat Databases: A collective resource for the identification of repetitive sequences in plants
-
Ouyang S, Buell CR (2004) The TIGR Plant Repeat Databases: a collective resource for the identification of repetitive sequences in plants. Nucleic Acids Res 32: D360-D363.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Ouyang, S.1
Buell, C.R.2
-
31
-
-
33846108228
-
RetrOryza: A database of the rice LTR-retrotransposons
-
Chaparro C, Guyot R, Zuccolo A, Piegu B, Panaud O (2007) RetrOryza: a database of the rice LTR-retrotransposons. Nucleic Acids Res 35: D66-D70.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Chaparro, C.1
Guyot, R.2
Zuccolo, A.3
Piegu, B.4
Panaud, O.5
-
32
-
-
0036226603
-
BLAT - The BLAST-like alignment tool
-
Kent WJ (2002) BLAT - The BLAST-like alignment tool. Genome Res 12: 656-664.
-
(2002)
Genome Res
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
33
-
-
34347239708
-
BAC 'landing' on chromosomes of Brachypodium distachyon for comparative genome alignment
-
Jenkins G, Hasterok R (2007) BAC 'landing' on chromosomes of Brachypodium distachyon for comparative genome alignment. Nat Protoc 2: 88-98.
-
(2007)
Nat Protoc
, vol.2
, pp. 88-98
-
-
Jenkins, G.1
Hasterok, R.2
-
34
-
-
0025311704
-
Nucleotide sequence of the 5.8S and 25S rRNA genes and of the internal transcribed spacers from Arabidopsis thaliana
-
Unfried I, Gruendler P (1990) Nucleotide sequence of the 5.8S and 25S rRNA genes and of the internal transcribed spacers from Arabidopsis thaliana. Nucleic Acids Res 18: 4011.
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 4011
-
-
Unfried, I.1
Gruendler, P.2
|