메뉴 건너뛰기




Volumn 5, Issue 10, 2010, Pages

Combining free text and structured electronic medical record entries to detect acute respiratory infections

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; AGED; BIOSURVEILLANCE; CLASSIFICATION ALGORITHM; COMPUTER ANALYSIS; DIAGNOSTIC ACCURACY; DIAGNOSTIC VALUE; ELECTRONIC MEDICAL RECORD; EPIDEMIC; FEMALE; FEVER; HUMAN; INTERMETHOD COMPARISON; MAJOR CLINICAL STUDY; MALE; MEDICAL DOCUMENTATION; MEDICAL INFORMATION; MEDICAL RECORD REVIEW; PATIENT IDENTIFICATION; PRESCRIPTION; RESPIRATORY TRACT INFECTION; REVIEW; SEARCH ENGINE; SENSITIVITY AND SPECIFICITY; ACUTE DISEASE; ALGORITHM; ARTICLE; CODING; MIDDLE AGED; OUTPATIENT;

EID: 78149436687     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0013377     Document Type: Review
Times cited : (35)

References (55)
  • 1
    • 0348198434 scopus 로고    scopus 로고
    • A novel coronavirus and SARS
    • Leng Q, Bentwich Z (2003) A novel coronavirus and SARS. N Engl J Med 349: 709.
    • (2003) N Engl J Med , vol.349 , pp. 709
    • Leng, Q.1    Bentwich, Z.2
  • 3
    • 67449110743 scopus 로고    scopus 로고
    • Emergence of a novel swine-origin influenza A (H1N1) virus in humans
    • Dawood FS, Jain S, Finelli L, Shaw MW, Lindstrom S, et al. (2009) Emergence of a novel swine-origin influenza A (H1N1) virus in humans. N Engl J Med 360: 2605-2615.
    • (2009) N Engl J Med , vol.360 , pp. 2605-2615
    • Dawood, F.S.1    Jain, S.2    Finelli, L.3    Shaw, M.W.4    Lindstrom, S.5
  • 4
    • 23844436610 scopus 로고    scopus 로고
    • Strategies for containing an emerging influenza pandemic in Southeast Asia
    • Ferguson NM, Cummings DA, Cauchemez S, Fraser C, Riley S, et al. (2005) Strategies for containing an emerging influenza pandemic in Southeast Asia. Nature 437: 209-214.
    • (2005) Nature , vol.437 , pp. 209-214
    • Ferguson, N.M.1    Cummings, D.A.2    Cauchemez, S.3    Fraser, C.4    Riley, S.5
  • 5
    • 0031849931 scopus 로고    scopus 로고
    • Outbreak investigations-a perspective
    • Reingold AL (1998) Outbreak investigations-a perspective. Emerg Infect Dis 4: 21-27.
    • (1998) Emerg Infect Dis , vol.4 , pp. 21-27
    • Reingold, A.L.1
  • 6
    • 13844255673 scopus 로고    scopus 로고
    • What is syndromic surveillance?
    • Henning KJ (2004) What is syndromic surveillance? MMWR Morb Mortal Wkly Rep 53 Suppl: 5-11.
    • (2004) MMWR Morb Mortal Wkly Rep , vol.53 , Issue.SUPPL , pp. 5-11
    • Henning, K.J.1
  • 7
    • 13844297000 scopus 로고    scopus 로고
    • ESSENCE II and the framework for evaluating syndromic surveillance systems
    • Lombardo JS, Burkom H, Pavlin J (2004) ESSENCE II and the framework for evaluating syndromic surveillance systems. MMWR Morb Mortal Wkly Rep 53 Suppl: 159-165.
    • (2004) MMWR Morb Mortal Wkly Rep , vol.53 , Issue.SUPPL , pp. 159-165
    • Lombardo, J.S.1    Burkom, H.2    Pavlin, J.3
  • 8
    • 21644468570 scopus 로고    scopus 로고
    • The RODS open source project: Removing a barrier to syndromic surveillance
    • Espino JU, Wagner MM, Tsui F, Su H, Olszewski RT, et al. (2004) The RODS open source project: removing a barrier to syndromic surveillance. Medinfo. pp 1192-1196.
    • (2004) Medinfo , pp. 1192-1196
    • Espino, J.U.1    Wagner, M.M.2    Tsui, F.3    Su, H.4    Olszewski, R.T.5
  • 9
    • 27744557452 scopus 로고    scopus 로고
    • Generating a reliable reference standard set for syndromic case classification
    • Chapman WW, Dowling JN, Wagner MM (2005) Generating a reliable reference standard set for syndromic case classification. J Am Med Inform Assoc 12: 618-629.
    • (2005) J Am Med Inform Assoc , vol.12 , pp. 618-629
    • Chapman, W.W.1    Dowling, J.N.2    Wagner, M.M.3
  • 10
    • 0942279639 scopus 로고    scopus 로고
    • A generalized linear mixed models approach for detecting incident clusters of disease in small areas, with an application to biological terrorism
    • Kleinman K, Lazarus R, Platt R (2004) A generalized linear mixed models approach for detecting incident clusters of disease in small areas, with an application to biological terrorism. Am J Epidemiol 159: 217-224.
    • (2004) Am J Epidemiol , vol.159 , pp. 217-224
    • Kleinman, K.1    Lazarus, R.2    Platt, R.3
  • 12
    • 34250793873 scopus 로고    scopus 로고
    • Benefits and barriers to electronic laboratory results reporting for notifiable diseases: The New York City Department of Health and Mental Hygiene experience
    • Nguyen TQ, Thorpe L, Makki HA, Mostashari F (2007) Benefits and barriers to electronic laboratory results reporting for notifiable diseases: the New York City Department of Health and Mental Hygiene experience. Am J Public Health 97(Suppl 1): S142-145.
    • (2007) Am J Public Health , vol.97 , Issue.SUPPL 1
    • Nguyen, T.Q.1    Thorpe, L.2    Makki, H.A.3    Mostashari, F.4
  • 13
    • 39649112646 scopus 로고    scopus 로고
    • A comparison of the completeness and timeliness of automated electronic laboratory reporting and spontaneous reporting of notifiable conditions
    • Overhage JM, Grannis S, McDonald CJ (2008) A comparison of the completeness and timeliness of automated electronic laboratory reporting and spontaneous reporting of notifiable conditions. Am J Public Health 98: 344-350.
    • (2008) Am J Public Health , vol.98 , pp. 344-350
    • Overhage, J.M.1    Grannis, S.2    McDonald, C.J.3
  • 14
    • 57149127529 scopus 로고    scopus 로고
    • Electronic Support for Public Health: Validated case finding and reporting for notifiable diseases using electronic medical data
    • Lazarus R, Klompas M, Campion FX, McNabb SJ, Hou X, et al. (2009) Electronic Support for Public Health: validated case finding and reporting for notifiable diseases using electronic medical data. J Am Med Inform Assoc 16: 18-24.
    • (2009) J Am Med Inform Assoc , vol.16 , pp. 18-24
    • Lazarus, R.1    Klompas, M.2    Campion, F.X.3    McNabb, S.J.4    Hou, X.5
  • 16
    • 25444463323 scopus 로고    scopus 로고
    • Syndromic surveillance on the epidemiologist's desktop: Making sense of much data
    • Hurt-Mullen KJ, Coberly J (2005) Syndromic surveillance on the epidemiologist's desktop: making sense of much data. MMWR Morb Mortal Wkly Rep 54 Suppl: 141-146.
    • (2005) MMWR Morb Mortal Wkly Rep , vol.54 , Issue.SUPPL , pp. 141-146
    • Hurt-Mullen, K.J.1    Coberly, J.2
  • 18
    • 0042427573 scopus 로고    scopus 로고
    • Heterogeneous case definitions used for the surveillance of influenza in Europe
    • Aguilera JF, Paget WJ, Mosnier A, Heijnen ML, Uphoff H, et al. (2003) Heterogeneous case definitions used for the surveillance of influenza in Europe. Eur J Epidemiol 18: 751-754.
    • (2003) Eur J Epidemiol , vol.18 , pp. 751-754
    • Aguilera, J.F.1    Paget, W.J.2    Mosnier, A.3    Heijnen, M.L.4    Uphoff, H.5
  • 19
    • 33645575521 scopus 로고    scopus 로고
    • Is influenza an influenza-like illness? Clinical presentation of influenza in hospitalized patients
    • Babcock HM, Merz LR, Fraser VJ (2006) Is influenza an influenza-like illness? Clinical presentation of influenza in hospitalized patients. Infect Control Hosp Epidemiol 27: 266-270.
    • (2006) Infect Control Hosp Epidemiol , vol.27 , pp. 266-270
    • Babcock, H.M.1    Merz, L.R.2    Fraser, V.J.3
  • 20
    • 0142227773 scopus 로고    scopus 로고
    • Working towards a simple case definition for influenza surveillance
    • Thursky K, Cordova SP, Smith D, Kelly H (2003) Working towards a simple case definition for influenza surveillance. J Clin Virol 27: 170-179.
    • (2003) J Clin Virol , vol.27 , pp. 170-179
    • Thursky, K.1    Cordova, S.P.2    Smith, D.3    Kelly, H.4
  • 21
    • 0035916949 scopus 로고    scopus 로고
    • Principles of appropriate antibiotic use for treatment of acute respiratory tract infections in adults: Background, specific aims, and methods
    • Gonzales R, Bartlett JG, Besser RE, Cooper RJ, Hickner JM, et al. (2001) Principles of appropriate antibiotic use for treatment of acute respiratory tract infections in adults: background, specific aims, and methods. Ann Intern Med 134: 479-486.
    • (2001) Ann Intern Med , vol.134 , pp. 479-486
    • Gonzales, R.1    Bartlett, J.G.2    Besser, R.E.3    Cooper, R.J.4    Hickner, J.M.5
  • 22
    • 33846667534 scopus 로고    scopus 로고
    • Codebased syndromic surveillance for influenzalike illness by international classification of diseases, ninth revision
    • Marsden-Haug N, Foster VB, Gould PL, Elbert E, Wang H, et al. (2007) Codebased syndromic surveillance for influenzalike illness by international classification of diseases, ninth revision. Emerg Infect Dis 13: 207-216.
    • (2007) Emerg Infect Dis , vol.13 , pp. 207-216
    • Marsden-Haug, N.1    Foster, V.B.2    Gould, P.L.3    Elbert, E.4    Wang, H.5
  • 23
    • 0035749074 scopus 로고    scopus 로고
    • Accuracy of ICD-9-coded chief complaints and diagnoses for the detection of acute respiratory illness
    • Espino JU, Wagner MM (2001) Accuracy of ICD-9-coded chief complaints and diagnoses for the detection of acute respiratory illness. Proc AMIA Symp: 164-168.
    • (2001) Proc AMIA Symp , pp. 164-168
    • Espino, J.U.1    Wagner, M.M.2
  • 24
    • 1542362334 scopus 로고    scopus 로고
    • Use of emergency department chief complaint and diagnostic codes for identifying respiratory illness in a pediatric population
    • Beitel AJ, Olson KL, Reis BY, Mandl KD (2004) Use of emergency department chief complaint and diagnostic codes for identifying respiratory illness in a pediatric population. Pediatr Emerg Care 20: 355-360.
    • (2004) Pediatr Emerg Care , vol.20 , pp. 355-360
    • Beitel, A.J.1    Olson, K.L.2    Reis, B.Y.3    Mandl, K.D.4
  • 26
    • 13844298201 scopus 로고    scopus 로고
    • Progress in understanding and using over-the-counter pharmaceuticals for syndromic surveillance
    • Magruder SF, Lewis SH, Najmi A, Florio E (2004) Progress in understanding and using over-the-counter pharmaceuticals for syndromic surveillance. MMWR Morb Mortal Wkly Rep 53 Suppl: 117-122.
    • (2004) MMWR Morb Mortal Wkly Rep , vol.53 , Issue.SUPPL , pp. 117-122
    • Magruder, S.F.1    Lewis, S.H.2    Najmi, A.3    Florio, E.4
  • 27
    • 39049175698 scopus 로고    scopus 로고
    • A multivariate procedure for identifying correlations between diagnoses and over-the-counter products from historical datasets
    • Li R, Wallstrom GL, Hogan WR (2005) A multivariate procedure for identifying correlations between diagnoses and over-the-counter products from historical datasets. AMIA Annu Symp Proc: 450-454.
    • (2005) AMIA Annu Symp Proc , pp. 450-454
    • Li, R.1    Wallstrom, G.L.2    Hogan, W.R.3
  • 28
    • 36049001579 scopus 로고    scopus 로고
    • Unsupervised clustering of over-the-counter healthcare products into product categories
    • Wallstrom GL, Hogan WR (2007) Unsupervised clustering of over-the-counter healthcare products into product categories. J Biomed Inform 40: 642-648.
    • (2007) J Biomed Inform , vol.40 , pp. 642-648
    • Wallstrom, G.L.1    Hogan, W.R.2
  • 29
    • 33847347329 scopus 로고    scopus 로고
    • Developing a national primary care-based early warning system for health protection-a surveillance tool for the future? Analysis of routinely collected data
    • Smith G, Hippisley-Cox J, Harcourt S, Heaps M, Painter M, et al. (2007) Developing a national primary care-based early warning system for health protection-a surveillance tool for the future? Analysis of routinely collected data. J Public Health (Oxf) 29: 75-82.
    • (2007) J Public Health (Oxf) , vol.29 , pp. 75-82
    • Smith, G.1    Hippisley-Cox, J.2    Harcourt, S.3    Heaps, M.4    Painter, M.5
  • 31
    • 25444446127 scopus 로고    scopus 로고
    • Experimental surveillance using data on sales of over-the-counter medications-Japan, November 2003-April 2004
    • Ohkusa Y, Shigematsu M, Taniguchi K, Okabe N (2005) Experimental surveillance using data on sales of over-the-counter medications-Japan, November 2003-April 2004. MMWR Morb Mortal Wkly Rep 54 Suppl: 47-52.
    • (2005) MMWR Morb Mortal Wkly Rep , vol.54 , Issue.SUPPL , pp. 47-52
    • Ohkusa, Y.1    Shigematsu, M.2    Taniguchi, K.3    Okabe, N.4
  • 32
    • 25444522649 scopus 로고    scopus 로고
    • Use of Medicaid prescription data for syndromic surveillance-New York
    • Chen JH, Schmit K, Chang H, Herlihy E, Miller J, et al. (2005) Use of Medicaid prescription data for syndromic surveillance-New York. MMWR Morb Mortal Wkly Rep 54 Suppl: 31-34.
    • (2005) MMWR Morb Mortal Wkly Rep , vol.54 , Issue.SUPPL , pp. 31-34
    • Chen, J.H.1    Schmit, K.2    Chang, H.3    Herlihy, E.4    Miller, J.5
  • 33
    • 25444526666 scopus 로고    scopus 로고
    • Implementation of laboratory order data in BioSense early event detection and situation awareness system
    • Ma H, Rolka H, Mandl K, Buckeridge D, Fleischauer A, et al. (2005) Implementation of laboratory order data in BioSense early event detection and situation awareness system. MMWR Morb Mortal Wkly Rep 54(Suppl, pp 27-30.
    • (2005) MMWR Morb Mortal Wkly Rep , vol.54 , Issue.SUPPL , pp. 27-30
    • Ma, H.1    Rolka, H.2    Mandl, K.3    Buckeridge, D.4    Fleischauer, A.5
  • 34
    • 1442360582 scopus 로고    scopus 로고
    • Automated linking of free-text complaints to reason-for-visit categories and International Classification of Diseases diagnoses in emergency department patient record databases
    • Day FC, Schriger DL, La M (2004) Automated linking of free-text complaints to reason-for-visit categories and International Classification of Diseases diagnoses in emergency department patient record databases. Ann Emerg Med 43: 401-409.
    • (2004) Ann Emerg Med , vol.43 , pp. 401-409
    • Day, F.C.1    Schriger, D.L.2    La, M.3
  • 35
    • 2342473869 scopus 로고    scopus 로고
    • Fever detection from free-text clinical records for biosurveillance
    • Chapman WW, Dowling JN, Wagner MM (2004) Fever detection from free-text clinical records for biosurveillance. J Biomed Inform 37: 120-127.
    • (2004) J Biomed Inform , vol.37 , pp. 120-127
    • Chapman, W.W.1    Dowling, J.N.2    Wagner, M.M.3
  • 36
    • 13844271355 scopus 로고    scopus 로고
    • Comparison of two major emergency department-based free-text chief-complaint coding systems
    • Mikosz CA, Silva J, Black S, Gibbs G, Cardenas I (2004) Comparison of two major emergency department-based free-text chief-complaint coding systems. MMWR Morb Mortal Wkly Rep 53 Suppl: 101-105.
    • (2004) MMWR Morb Mortal Wkly Rep , vol.53 , Issue.SUPPL , pp. 101-105
    • Mikosz, C.A.1    Silva, J.2    Black, S.3    Gibbs, G.4    Cardenas, I.5
  • 38
    • 73949088395 scopus 로고    scopus 로고
    • Using natural language processing to improve accuracy of automated notifiable disease reporting
    • Friedlin J, Grannis S, Overhage JM (2008) Using natural language processing to improve accuracy of automated notifiable disease reporting. AMIA Annu Symp Proc: 207-211.
    • (2008) AMIA Annu Symp Proc , pp. 207-211
    • Friedlin, J.1    Grannis, S.2    Overhage, J.M.3
  • 39
    • 21644458384 scopus 로고    scopus 로고
    • Identifying respiratory findings in emergency department reports for biosurveillance using MetaMap
    • Chapman WW, Fiszman M, Dowling JN, Chapman BE, Rindflesch TC (2004) Identifying respiratory findings in emergency department reports for biosurveillance using MetaMap. Medinfo 11: 487-491.
    • (2004) Medinfo , vol.11 , pp. 487-491
    • Chapman, W.W.1    Fiszman, M.2    Dowling, J.N.3    Chapman, B.E.4    Rindflesch, T.C.5
  • 40
    • 34047250131 scopus 로고    scopus 로고
    • Hospital electronic medical record-based public health surveillance system deployed during the 2002 Winter Olympic Games
    • Gundlapalli AV, Olson J, Smith SP, Baza M, Hausam RR, et al. (2007) Hospital electronic medical record-based public health surveillance system deployed during the 2002 Winter Olympic Games. Am J Infect Control 35: 163-171.
    • (2007) Am J Infect Control , vol.35 , pp. 163-171
    • Gundlapalli, A.V.1    Olson, J.2    Smith, S.P.3    Baza, M.4    Hausam, R.R.5
  • 41
    • 4544280638 scopus 로고    scopus 로고
    • Automated encoding of clinical documents based on natural language processing
    • Friedman C, Shagina L, Lussier Y, Hripcsak G (2004) Automated encoding of clinical documents based on natural language processing. J Am Med Inform Assoc 11: 392-402.
    • (2004) J Am Med Inform Assoc , vol.11 , pp. 392-402
    • Friedman, C.1    Shagina, L.2    Lussier, Y.3    Hripcsak, G.4
  • 42
    • 21544453050 scopus 로고    scopus 로고
    • Automated detection of adverse events using natural language processing of discharge summaries
    • Melton GB, Hripcsak G (2005) Automated detection of adverse events using natural language processing of discharge summaries. J Am Med Inform Assoc 12: 448-457.
    • (2005) J Am Med Inform Assoc , vol.12 , pp. 448-457
    • Melton, G.B.1    Hripcsak, G.2
  • 45
    • 25444475257 scopus 로고    scopus 로고
    • BioSense: Implementation of a national early event detection and situational awareness system
    • Bradley CA, Rolka H, Walker D, Loonsk J (2005) BioSense: implementation of a national early event detection and situational awareness system. MMWR Morb Mortal Wkly Rep 54 Suppl: 11-19.
    • (2005) MMWR Morb Mortal Wkly Rep , vol.54 , Issue.SUPPL , pp. 11-19
    • Bradley, C.A.1    Rolka, H.2    Walker, D.3    Loonsk, J.4
  • 46
    • 0141499328 scopus 로고    scopus 로고
    • A systems overview of the Electronic Surveillance System for the Early Notification of Community-Based Epidemics (ESSENCE II)
    • Lombardo J, Burkom H, Elbert E, Magruder S, Lewis SH, et al. (2003) A systems overview of the Electronic Surveillance System for the Early Notification of Community-Based Epidemics (ESSENCE II). J Urban Health 80: i32-42.
    • (2003) J Urban Health , vol.80
    • Lombardo, J.1    Burkom, H.2    Elbert, E.3    Magruder, S.4    Lewis, S.H.5
  • 48
    • 0020083498 scopus 로고
    • The meaning and use of the area under a receiver operating characteristic (ROC) curve
    • Hanley JA, McNeil BJ (1982) The meaning and use of the area under a receiver operating characteristic (ROC) curve. Radiology 143: 29-36.
    • (1982) Radiology , vol.143 , pp. 29-36
    • Hanley, J.A.1    McNeil, B.J.2
  • 50
    • 0035752429 scopus 로고    scopus 로고
    • Effective mapping of biomedical text to the UMLS Metathesaurus: The MetaMap program
    • Aronson AR (2001) Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program. Proc AMIA Symp: 17-21.
    • (2001) Proc AMIA Symp , pp. 17-21
    • Aronson, A.R.1
  • 52
    • 0035133051 scopus 로고    scopus 로고
    • UMLS concept indexing for production databases: A feasibility study
    • Nadkarni P, Chen R, Brandt C (2001) UMLS concept indexing for production databases: a feasibility study. J Am Med Inform Assoc 8: 80-91.
    • (2001) J Am Med Inform Assoc , vol.8 , pp. 80-91
    • Nadkarni, P.1    Chen, R.2    Brandt, C.3
  • 53
    • 4544274692 scopus 로고    scopus 로고
    • IndexFinder: A method of extracting key concepts from clinical texts for indexing
    • Zou Q, Chu WW, Morioka C, Leazer GH, Kangarloo H (2003) IndexFinder: a method of extracting key concepts from clinical texts for indexing. AMIA Annu Symp Proc: 763-767.
    • (2003) AMIA Annu Symp Proc , pp. 763-767
    • Zou, Q.1    Chu, W.W.2    Morioka, C.3    Leazer, G.H.4    Kangarloo, H.5
  • 54
    • 0035753772 scopus 로고    scopus 로고
    • Evaluating the UMLS as a source of lexical knowledge for medical language processing
    • Friedman C, Liu H, Shagina L, Johnson S, Hripcsak G (2001) Evaluating the UMLS as a source of lexical knowledge for medical language processing. Proc AMIA Symp: 189-193.
    • (2001) Proc AMIA Symp , pp. 189-193
    • Friedman, C.1    Liu, H.2    Shagina, L.3    Johnson, S.4    Hripcsak, G.5
  • 55
    • 0035741485 scopus 로고    scopus 로고
    • A simple algorithm for identifying negated findings and diseases in discharge summaries
    • Chapman WW, Bridewell W, Hanbury P, Cooper GF, Buchanan BG (2001) A simple algorithm for identifying negated findings and diseases in discharge summaries. J Biomed Inform 34: 301-310.
    • (2001) J Biomed Inform , vol.34 , pp. 301-310
    • Chapman, W.W.1    Bridewell, W.2    Hanbury, P.3    Cooper, G.F.4    Buchanan, B.G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.