Analysis of fishery-independent hook and line-based data for use in the stock assessment of bocaccio rockfish (Sebastes paucispinis)

Fisheries Research

Volumn 106, Issue 3, 2010, Pages 298-309

  Harms, John H ^a   Wallace, John R ^a   Stewart, Ian J ^a  

^a NORTHWEST FISHERIES SCIENCE CENTER   (United States)

Author keywords

GLM; Hook and line research survey; Relative index; Sebastes paucispinis; Standardized catch per unit effort

Indexed keywords

SEBASTES PAUCISPINIS;

EID: 78149413240     PISSN: 01657836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.fishres.2010.08.010     Document Type: Article

References (29)

1. Burnham K.P., Anderson D.R. Model Selection and Multimodel Inference: A Practical Information-Theoretic Approach 2002, Springer-Verlag, New York. second ed.
2. Field J.C., Dick E.J., Pearson D., MacCall A.D. Status of bocaccio, Sebastes paucispinis, in the Conception, Monterey, and Eureka INPFC areas for 2009. Status of the Pacific Coast Groundfish Fishery through 2009, Stock Assessment and Fishery Evaluation: Stock Assessments and Rebuilding Analyses 2009, Pacific Fishery Management Council, 7700 NE Ambassador Place, Suite 101, Portland, OR 97220-1384, 254 pp.
3. Harms, J.H., Benante, J.A., Barnhart, R.M., 2008. The 2004-2007 hook and line survey of shelf rockfish in the Southern California Bight: estimates of distribution, abundance, and length composition. U.S. Dept. Commer., NOAA Tech. Memo. NMFS-NWFSC-95, 110 pp.
4. Helser, T.E., Stewart, I.J., Whitmire, C.E., Horness, B.H., 2007. Model-based estimates of abundance for 11 species from the NMFS slope surveys. U.S. Dept. Commer., NOAA Tech. Memo. NMFS-NWFSC-82, 145 pp.
5. Hyde J.R., Kimbrell C.A., Budrick J.E., Lynn E.A., Vetter R.D. Cryptic speciation in the vermilion rockfish (Sebastes miniatus) and the role of bathymetry in the speciation process. Mol. Ecol. 2008, 17:1122-1136.
6. Jagielo T., Hoffmann A., Tagart J., Zimmermann M. Demersal groundfish densities in trawlable and untrawlable habitats off Washington: implications for the estimation of habitat bias in trawl surveys. Fish. Bull. 2003, 101:545-565.
7. Keller, A.A., Horness, B.H., Tuttle, V.J., Wallace, J.R., Simon, V.H., Fruh, E.L., Bosley, K.L., Kamikawa, D.J., 2006. The 2002 U.S. West Coast upper continental slope trawl survey of groundfish resources off Washington, Oregon, and California: estimates of distribution, abundance, and length composition. U.S. Dept. Commer., NOAA Tech. Memo. NMFS-NWFSC-75, 189 pp.
8. Keller, A.A., Simon, V.H., Horness, B.H., Wallace, J.R., Tuttle, V.J., Fruh, E.L., Bosley, K.L., Kamikawa, D.J., Buchanan, J.C., 2007. The 2003 U.S. West Coast bottom trawl survey of groundfish resources off Washington, Oregon, and California: estimates of distribution, abundance, and length composition. U.S. Dept. Commer., NOAA Tech. Memo. NMFS-NWFSC-86, 130 pp.
9. Love M., Yoklavich M., Thorsteinson L. The Rockfishes of the Northeast Pacific 2002, University of California Press, Berkeley.
10. MacCall A.D. Assessment of vermilion rockfish in southern and northern California. Status of the Pacific Coast Groundfish Fishery through 2005, Stock Assessment and Fishery Evaluation: Stock Assessments and Rebuilding Analyses 2005, Pacific Fishery Management Council, 7700 NE Ambassador Place, Suite 101, Portland, OR 97220-1384, 128 pp.
11. MacCall A.D. Status of bocaccio off California in 2007. Status of the Pacific Coast Groundfish Fishery through 2008, Stock Assessment and Fishery Evaluation: Stock Assessments, STAR Panel Reports, and Rebuilding Analyses 2007, Pacific Fishery Management Council, 7700 NE Ambassador Place, Suite 101, Portland, OR 97220-1384, 57 pp.
12. MacCall A.D. Bocaccio rebuilding analysis for bocaccio 2007. Status of the Pacific Coast Groundfish Fishery through 2008, Stock Assessment and Fishery Evaluation: Stock Assessments, STAR Panel Reports, and Rebuilding Analyses 2007, Pacific Fishery Management Council, 7700 NE Ambassador Place, Suite 101, Portland, OR 97220-1384, 12 pp.
13. Maunder M.N., Punt A.E. Standardizing catch and effort data: a review of recent approaches. Fish. Res. 2004, 70:141-159.
14. MCMCpack, 2009. Lead developers: Andrew D. Martin and Kevin M. Quinn. http://mcmcpack.wustl.edu/wiki/index.php/Main_Page.
15. Pacific Fishery Management Council Research and Data Needs 2006-2008 2006, Pacific Fishery Management Council, 7700 NE Ambassador Place, Suite 101, Portland, OR 97220-1384, 45 pp.
16. R Project for Statistical Computing, 2009. http://www.r-project.org/.
17. Ressler P.H., Holmes J.A., Fleischer G.W., Thomas R.E., Cooke K.C. Pacific hake, Merluccius productus, autoecology: a timely review. Mar. Fish. Rev. 2007, 69:1-24.
18. Rice J.C., Richards L.J. A framework for reducing implementation uncertainty in fisheries management. N. Am. J. Fish. Manage. 1996, 16:488-494.
19. Schwarz G. Estimating the dimension of a model. Ann. Stat. 1978, 6:461-464.
20. Southeast Data, Assessment and Review (SEDAR) SEDAR Grouper Assessment Review: SEDAR Supplement 1, Final Report, June 2007 2007, South Atlantic Fishery Management Council, 4055 Faber Place, Suite 201, North Charleston, SC 29405, 174 pp.
21. Seger J. Research and Data Needs 2000-2002 2000, Pacific Fishery Management Council, 7700 NE Ambassador Place, Suite 101, Portland, OR 97220-1384, 25 pp.
22. Sigler M.K. Abundance estimation and capture of sablefish (Anoplopoma fimbria) by longline gear. Can. J. Fish. Aquat. Sci. 2000, 57:1270-1283.
23. Spiegelhalter D.J., Best N.G., Carlin B.P., van der Linde A. Bayesian measures of model complexity and fit (with discussion). J. R. Stat. Soc. Ser. B: Stat. Methodol. 2002, 64:583-639.
24. Stoner A.W., Ryer C.H., Parker S.J., Auster P.J., Wakefield W.W. Evaluating the role of fish behavior in surveys conducted with underwater vehicles. Can. J. Fish. Aquat. Sci. 2008, 65:1230-1243.
25. Turk, T.A., Builder, T., West, C.W., Kamikawa, D.J., Wallace, J.R., Methot, R.D., Bailey, A.R., Bosley, K.L., Cook, A.J., Fruh, E.L., Horness, B.H., Piner, K., Sanborn, H.R., Wakefield, W.W., 2001. The 1998 Northwest Fisheries Science Center Pacific West Coast upper continental slope trawl survey of groundfish resources off Washington, Oregon, and California: estimates of distribution, abundance, and length composition. U.S. Dept. Commer., NOAA Tech. Memo. NMFS-NWFSC-50. 121 pp.
26. US General Accounting Office Pacific Groundfish: Continued Efforts Needed to Improve Reliability of Stock Assessments 2004, US General Accounting Office, Washington, DC, Report to Congressional Requesters, GAO-04-606.
27. Wilkins, M.E., Zimmermann, M., Weinberg, K.L., 1998. The 1995 Pacific west coast bottom trawl survey of groundfish resources: estimates of distribution, abundance, and length and age composition. U.S. Dept. Commer., NOAA Tech. Memo. NMFS-AFSC-89, 138 pp. plus Appendices.
28. Xiao Y. Use of individual types of fishing effort in analyzing catch and effort data by use of a generalized linear model. Fish. Res. 2004, 70:311-318.
29. Yoklavich M.M., Love M.S., Forney K.A. A fishery-independent assessment of an overfished rockfish stock, cowcod (Sebastes levis), using direct observations from an occupied submersible. Can. J. Fish. Aquat. Sci. 2007, 64:1795-1804.