Local factors control the community composition of cyanobacteria in lakes while heterotrophic bacteria follow a neutral model

Freshwater Biology

Volumn 55, Issue 12, 2010, Pages 2447-2457

  Drakare, Stina ^a   Liess, Antonia ^a  

^a UPPSALA UNIVERSITY   (Sweden)

Author keywords

Automated ribosomal intergenic spacer analysis; Cyanobacteria; Environmental factors; Heterotrophic bacteria; Neutral model

Indexed keywords

BACTERIA (MICROORGANISMS); CYANOBACTERIA; EUKARYOTA;

EID: 78149332432     PISSN: 00465070     EISSN: 13652427     Source Type: Journal    
DOI: 10.1111/j.1365-2427.2010.02473.x     Document Type: Article

References (35)

1. APHA (1998) Standard Methods for the Examination of Water and Waste Water, 18th edn. American Public Health Association, Washington, D.C., USA.
2. Azam F., Fenchel T., Field J.G., Gray J.S., Meyer-Reil L.A. & Thingstad F. (1983) The ecological role of water-column microbes in the sea. Marine Ecology Progress Series, 10, 257-263.
3. Beisner B.E., Peres-Neto P.R., Lindström E.S., Barnett A. & Longhi M.L. (2006) The role of environmental and spatial processes in structuring lake communities from bacteria to fish. Ecology, 87, 2985-2991.
4. 3H]thymidine incorporation in a eutrophic Swedish lake. Applied and Environmental Microbiology, 45, 1709-1721.
5. Blackwood C.B., Hudleston D., Zak D.R. & Buyer J.S. (2007) Interpreting ecological diversity indices applied to terminal restriction fragment length polymorphism data: insights from simulated microbial communities. Applied and Environmental Microbiology, 73, 5276-5283.
6. Borcard D., Legendre P., Avois-Jaquet C. & Tuomisto H. (2004) Dissecting the spatial structure of ecological data at multiple scales. Ecology, 85, 1826-1832.
7. Ter Braak C.J.F. & Smilauer P. (1998) CANOCO Reference Manual and User's Guide to Canoco for Windows: Software for Canonical Community Ordination (version 4). Microcomputer Power, Ithaca, NY.
8. Chesson P. (2000) Mechanisms of maintenance of species diversity. Annual Review of Ecology and Systematics, 31, 343-366.
9. Drakare S., Blomqvist P., Bergström A.K. & Jansson M. (2003) Relationships between picophytoplankton and environmental variables in lakes along a gradient of water colour and nutrient content. Freshwater Biology, 48, 729-740.
10. Fisher M.M. & Triplett E.W. (1999) Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities. Applied and Environmental Microbiology, 65, 4630-4636.
11. Fogg G.E. (1986) Picoplankton. Proceedings of the Royal Society of London, 228, 1-30.
12. Fry J.C. (1988) Determination of biomass. In: Methods in Aquatic Bacteriology. (Ed B. Austin), pp. 27-72. John Wiley, New York.
13. Gause G.F. (1934) The Struggle for Existence. Williams and Wilkins, Baltimore.
14. Hagström Å., Pinhassi J. & Zweifel U.L. (2000) Biogeographical diversity among marine bacterioplankton. Aquatic Microbial Ecology, 21, 231-244.
15. Hammer Ø., Harper D.A.T. & Ryan P.D. (2001) PAST: paleontological statistics software package for education and data analysis. Paleontologia Electronica, 4, 9.
16. Hardin G. (1960) The competitive exclusion principle. Science, 131, 1292-1298.
17. Hubbell S.P. (2001) The Unified Neutral Theory of Biodiversity and Biogeography. Princeton University Press, Princeton, N.J.
18. Hughes Martiny J.B., Bohannan B.J.M., Brown J.H. et al. (2006) Microbial biogeography: putting microorganisms on the map. Nature Reviews Microbiology, 4, 102-112.
19. Hutchinson G.E. (1961) The paradox of the plankton. The American Naturalist, 95, 137-145.
20. Janse I., Meima M., Kardinaal W.E.A. & Zwart G. (2003) High-resolution differentiation of Cyanobacteria by using rRNA-internal transcribed spacer denaturing gradient gel electrophoresis. Applied and Environmental Microbiology, 69, 6634-6643.
21. Johnson Z.I., Zinser E.R., Coe A., McNulty N.P., Woodward S. & Chisholm S.W. (2006) Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients. Science, 311, 1737-1740.
22. Jones S.E. & McMahon K.D. (2009) Species-sorting may explain an apparent minimal effect of immigration on freshwater bacterial community dynamics. Environmental Microbiology, 11, 905-913.
23. Kisand V., Andersson N. & Wikner J. (2005) Bacterial freshwater species successfully immigrate to the brackish water environment in the northern Baltic. Limnology and Oceanography, 50, 945-956.
24. Lee C.E. & Bell M.A. (1999) Causes and consequences of recent freshwater invasions by saltwater animals. Trends in Ecology and Evolution, 14, 284-288.
25. Loisel P., Harmand J., Zemb O., Latrille E., Lobry C., Delgenès J.P. & Godon J.J. (2006) Denaturing gradient electrophoresis (DGE) and singlestrand conformation polymorphism (SSCP) molecular fingerprintings revisited by simulation and used as a tool to measure microbial diversity. Environmental Microbiology, 8, 720-731.
26. Olrik K., Blomqvist P., Brettum P., Cronberg G. & Eloranta P. (1998) Methods for Quantitative Assessment of Phytoplankton in Freshwaters, Part 1. Naturvårdsverket Förlag, Stockholm.
27. Östman Ö., Drakare S., Kritzberg E.S., Langenheder S., Logue J.B. & Lindström E.S. (2010) Regional invariance among microbial communities. Ecology Letters, 13, 118-127.
28. Peres-Neto P.R., Legendre L., Dray S. & Borcard D. (2006) Variation partitioning of species data matrices: estimation and comparison of fractions. Ecology, 87, 2614-2625.
29. Richardson T.L. & Jackson G.A. (2007) Small phytoplankton and carbon export from the surface ocean. Science, 315, 838-840.
30. Sloan W.T., Woodcock S., Lunn M., Head I.M., Nee S. & Curtis T.P. (2006) The roles of immigration and chance in shaping prokaryote community structure. Environmental Microbiology, 8, 732-740.
31. Stockner J.G. & Antia N.J. (1986) Algal picoplankton from marine and freshwater ecosystems: a multidisciplinary perspective. Canadian Journal of Fisheries and Aquatic Sciences, 43, 2472-2503.
32. Taton A., Grubisic S., Balthasart P., Hodgson D.A., Laybourn-Parry J. & Wilmotte A. (2006) Biogeographical distribution and ecological ranges of benthic cyanobacteria in East Antarctic lakes. FEMS Microbiology Ecology, 57, 272-289.
33. Van Der Gucht K., Cottenie K., Muylaert K. et al. (2007) The power of species sorting: local factors drive bacterial community composition over a wide range of spatial scales. Proceedings of the National Academy of Sciences, 51, 20404-20409.
34. Vergnon R., Dulvy N.K. & Freckleton R.P. (2009) Niches versus neutrality: uncovering the drivers of diversity in a species-rich community. Ecology Letters, 12, 1079-1090.
35. Walker S.C. & Cyr H. (2007) Testing the standard neutral model of biodiversity in lake communities. Oikos, 116, 143-155.