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Volumn 7, Issue , 2010, Pages 3842-3845

ATRMiner: A system for automatic biomedical named entities recognition

Author keywords

Biomedicine; Component; Named entities recognition; Natural language processing

Indexed keywords


EID: 78149318382     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ICNC.2010.5582838     Document Type: Conference Paper
Times cited : (4)

References (17)
  • 1
    • 16344370215 scopus 로고    scopus 로고
    • Automatic extraction of gene/protein biological functions from biomedical text
    • Apr 1, Epub 2004 Oct 27
    • Koike A, Niwa Y, Takagi T. Automatic extraction of gene/protein biological functions from biomedical text. Bioinformatics. 2005 Apr 1;21(7):1227-36. Epub 2004 Oct 27.
    • (2005) Bioinformatics , vol.21 , Issue.7 , pp. 1227-1236
    • Koike, A.1    Niwa, Y.2    Takagi, T.3
  • 2
    • 7444233821 scopus 로고    scopus 로고
    • A text-mining system for knowledge discovery from biomedical documents
    • Uramoto N, Matsuzawa H, Nagano T, et al. A text-mining system for knowledge discovery from biomedical documents. IBM SYSTEMS JOURNAL. 2004 :43(3): 516-533.
    • (2004) IBM Systems Journal , vol.43 , Issue.3 , pp. 516-533
    • Uramoto, N.1    Matsuzawa, H.2    Nagano, T.3
  • 3
    • 36348990139 scopus 로고    scopus 로고
    • Frontiers of biomedical text mining current progress
    • Sep, Epub 2007 Oct 30. Review
    • Zweigenbaum P, Demner-Fushman D, Yu H, Cohen KB. Frontiers of biomedical text mining current progress. Brief Bioinform. 2007 Sep;8(5):358-75. Epub 2007 Oct 30. Review.
    • (2007) Brief Bioinform , vol.8 , Issue.5 , pp. 358-375
    • Zweigenbaum, P.1    Demner-Fushman, D.2    Yu, H.3    Cohen, K.B.4
  • 4
    • 16244414494 scopus 로고    scopus 로고
    • Introduction to the bio-entity recognition task at JNLPBA
    • Kim JD, Ohta T, Tsuruoka Y, Tateisi Y: Introduction to the Bio-Entity Recognition Task at JNLPBA. JNLPBA-04. 2004:70-75.
    • (2004) JNLPBA-04 , pp. 70-75
    • Kim, J.D.1    Ohta, T.2    Tsuruoka, Y.3    Tateisi, Y.4
  • 5
    • 4944229711 scopus 로고    scopus 로고
    • GENIA corpus- A semantically annotated corpus for bio-textmining
    • Kim JD, Ohta T, Tateisi Y, Tsujii J. GENIA corpus-a semantically annotated corpus for bio-textmining. Bioinformatics. 2003:19 Suppl 1:i180-2.
    • (2003) Bioinformatics , vol.19 , Issue.SUPPL. 1
    • Kim, J.D.1    Ohta, T.2    Tateisi, Y.3    Tsujii, J.4
  • 6
    • 17244376942 scopus 로고    scopus 로고
    • Biomedical named entity recognition using conditional random fields and rich feature sets
    • Settles B. Biomedical named entity recognition using conditional random fields and rich feature sets. JNLPBA-04. 2004:104-107.
    • (2004) JNLPBA-04 , pp. 104-107
    • Settles, B.1
  • 7
    • 33947304181 scopus 로고    scopus 로고
    • Overview of BioCreAtIvE: Critical assessment of information extraction for biology
    • Epub 2005 May 24
    • Hirschman L, Yeh A, Blaschke C, Valencia A. Overview of BioCreAtIvE: critical assessment of information extraction for biology. BMC Bioinformatics. 2005;6 Suppl 1:S1. Epub 2005 May 24.
    • (2005) BMC Bioinformatics , vol.6 , Issue.SUPPL. 1
    • Hirschman, L.1    Yeh, A.2    Blaschke, C.3    Valencia, A.4
  • 8
    • 25444488117 scopus 로고    scopus 로고
    • Boosting lexical knowledge for biomedical named entity recognition
    • Park K, Kim S, Lee D, Rim H. Boosting lexical knowledge for biomedical named entity recognition. JNLPBA-04. 2004:76-79.
    • (2004) JNLPBA-04 , pp. 76-79
    • Park, K.1    Kim, S.2    Lee, D.3    Rim, H.4
  • 9
    • 75749141042 scopus 로고    scopus 로고
    • Name entity recognition in biomedical text using a HMM model
    • Zhao S. Name entity recognition in biomedical text using a HMM model. JNLPBA-04. 2004:84-87.
    • (2004) JNLPBA-04 , pp. 84-87
    • Zhao, S.1
  • 12
    • 35448967900 scopus 로고    scopus 로고
    • A method exploiting syntactic patterns and the UMLS semantics for aligning biomedical ontologies: The case of OBO disease ontologies
    • Dec;76, Epub 2007 May 22
    • Marquet G, Mosser J, Burgun A. A method exploiting syntactic patterns and the UMLS semantics for aligning biomedical ontologies: the case of OBO disease ontologies. Int J Med Inform. 2007 Dec;76 Suppl 3:S353-361. Epub 2007 May 22.
    • (2007) Int J Med Inform. , Issue.SUPPL. 3
    • Marquet, G.1    Mosser, J.2    Burgun, A.3
  • 13
    • 84887212486 scopus 로고    scopus 로고
    • PPI finder: A mining tool for human protein-protein interactions
    • Epub 2009 Feb 23
    • He M, Wang Y, Li W. PPI finder: a mining tool for human protein-protein interactions. PLoS One, 2009;4(2):e4554. Epub 2009 Feb 23.
    • (2009) PLoS One , vol.4 , Issue.2
    • He, M.1    Wang, Y.2    Li, W.3
  • 14
    • 7944230660 scopus 로고    scopus 로고
    • Controlled vocabularies in bioinformatics: A case study in the gene ontology
    • November
    • Smith B, Kumar A. Controlled vocabularies in bioinformatics: a case study in the gene ontology. Drug Discovery Today: BIOSILICO, Volume 2, Issue 6, November 2004, Pages 246-252.
    • (2004) Drug Discovery Today: BIOSILICO , vol.2 , Issue.6 , pp. 246-252
    • Smith, B.1    Kumar, A.2
  • 15
    • 78149355798 scopus 로고    scopus 로고
    • URL: http://obo.sourceforge.net.
  • 16
    • 60549093731 scopus 로고    scopus 로고
    • BioTagger-GM: A gene/protein name recognition system
    • Mar-Apr, Epub 2008 Dec 11
    • Torii M, Hu Z, Wu CH, Liu H. BioTagger-GM: a gene/protein name recognition system. J Am Med Inform Assoc. 2009 Mar-Apr; 16(2):247-55. Epub 2008 Dec 11.
    • (2009) J Am Med Inform Assoc. , vol.16 , Issue.2 , pp. 247-255
    • Torii, M.1    Hu, Z.2    Wu, C.H.3    Liu, H.4
  • 17
    • 0036678776 scopus 로고    scopus 로고
    • Tagging gene and protein names in biomedical text
    • Aug
    • Tanabe L, Wilbur WJ. Tagging gene and protein names in biomedical text. Bioinformatics. 2002 Aug;18(8):1124-1132.
    • (2002) Bioinformatics , vol.18 , Issue.8 , pp. 1124-1132
    • Tanabe, L.1    Wilbur, W.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.