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Volumn 26, Issue 22, 2010, Pages 2902-2903

girafe - An R/Bioconductor package for functional exploration of aligned next-generation sequencing reads

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER INTERFACE; COMPUTER PROGRAM; DNA MICROARRAY; GENETIC DATABASE; GENOME; GENOMICS; METHODOLOGY; SEQUENCE ALIGNMENT;

EID: 78149258096     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btq531     Document Type: Article
Times cited : (13)

References (7)
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    • Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
    • Edgar, R. et al. (2002) Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res., 30, 207-210.
    • (2002) Nucleic Acids Res , vol.30 , pp. 207-210
    • Edgar, R.1
  • 2
    • 28744458859 scopus 로고    scopus 로고
    • Bioconductor: open software development for computational biology and bioinformatics
    • Gentleman, R.C. et al. (2004) Bioconductor: open software development for computational biology and bioinformatics. Genome Biol., 5, R80.
    • (2004) Genome Biol , vol.5
    • Gentleman, R.C.1
  • 3
    • 25844449770 scopus 로고    scopus 로고
    • Galaxy: a platform for interactive large-scale genome analysis
    • Giardine, B. et al. (2005) Galaxy: a platform for interactive large-scale genome analysis. Genome Res., 15, 1451-1455.
    • (2005) Genome Res , vol.15 , pp. 1451-1455
    • Giardine, B.1
  • 4
    • 62349130698 scopus 로고    scopus 로고
    • Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
    • Langmead, B. et al. (2009) Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol., 10, R25.
    • (2009) Genome Biol , vol.10
    • Langmead, B.1
  • 5
    • 68549104404 scopus 로고    scopus 로고
    • The Sequence Alignment/Map format and SAMtools
    • Li, H. et al. (2009) The Sequence Alignment/Map format and SAMtools. Bioinformatics, 25, 2078-2079.
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1
  • 6
    • 70349866687 scopus 로고    scopus 로고
    • ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data
    • Morgan, M. et al. (2009) ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data. Bioinformatics, 25, 2607-2608.
    • (2009) Bioinformatics , vol.25 , pp. 2607-2608
    • Morgan, M.1
  • 7
    • 44349159416 scopus 로고    scopus 로고
    • Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes
    • Tam, O.H. et al. (2008) Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes. Nature, 453, 534-538.
    • (2008) Nature , vol.453 , pp. 534-538
    • Tam, O.H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.