The cardiac atlas project: Development of a framework integrating cardiac images and models

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

Volumn 6364 LNCS, Issue , 2010, Pages 54-64

  Backhaus, Michael ^a   Britten, Randall ^a   Do Chung, Jae ^a   Cowan, Brett R ^a   Fonseca, Carissa G ^b   Medrano Gracia, Pau ^a   Tao, Wenchao ^b   Young, Alistair A ^a  

^a UNIVERSITY OF AUCKLAND   (New Zealand)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Computational Atlas; Database; Parametric Shape Models

Indexed keywords

3D IMAGE DATA; CARDIAC IMAGES; CARDIAC IMAGING; COMPUTATIONAL ATLAS; CURATION; DATABASE; INTERNATIONAL COLLABORATIONS; MODELING TOOL; MOZILLA; OPEN SOURCES; OPEN-SOURCE; RESEARCH DATABASE; SEARCH PARAMETERS; SHAPE MODEL; SOFTWARE COMPONENT; SOFTWARE FRAMEWORKS; WEB INTERFACE; XML SCHEMAS;

DATABASE SYSTEMS; ELECTROPHYSIOLOGY; HEART; INTERNATIONAL COOPERATION; NETWORK ARCHITECTURE; RESEARCH; SOFTWARE DESIGN; WEB BROWSERS;

THREE DIMENSIONAL;

EID: 78049373323     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-642-15835-3_6     Document Type: Conference Paper

References (39)

1. Neu, S. C., Valentino, D. J., Toga, A. W.: The LONI Debabeler: a mediator for neuroimaging software. NeuroImage 24 (4) (2005)
2. Young, A. A., Frangi, A. F.: Computational cardiac atlases: from patient to population and back. Experimental Physiology (2009)
3. Meier, W.: eXist: An Open Source Native XML Database. LNCS, vol. 2593. Springer, Berlin (2009)
4. Philip, M. P.: Building Cyber-Infrastructure for the Biomedical Informatics Research Network. IEEE Computer Society, Los Alamitos (2006)
5. Cimino, J. J., Hayamizu, T. F., Bodenreider, O., Davis, B., Stafford, G. A., Ringwald, M.: The caBIG terminology review process. Journal of Biomedical Informatics 42(3), Auditing of Terminologies (2009)
6. Warnock, M. J., Toland, C., Evans, D., Wallace, B., Nagy, P.: Benefits of Using the DCM4CHE DICOM Archive. Journal of Digital Imaging (2007)
7. Widenius, M., Axmark, D., DuBois, P.: Mysql Reference Manual. O'Reilly & Associates, Inc., Sebastopol (2002)
8. Heffelfinger, D.: Java EE 5 Development using GlassFish Application Server. Packt Pub. Ltd. (2007)
9. Backhaus, M., Chung, J., Cowan, B. R., Fonseca, C. G., Tao, W., Young, A. A.: The Cardiac Atlas Project: Towards a Map of the Heart. In: Kerckhoffs, R. (ed.) Patient-specific modeling of the cardiovascular system. Springer, Heidelberg (in press)
10. Sezov, R.: Liferay Portal Administrator's Guide, 3rd edn. Liferay Press, Los Angeles (2009)
11. Bellas, F.: Standards for second-generation portals. IEEE Internet Computing (2004)
12. Alur, D., Crupi, J., Malks, D.: Core J2EE patterns. Prentice Hall PTR, Englewood Cliffs (2003)
13. Fleury, M., Lindfors, J.: JMX: Managing J2EE with Java Management Extensions. Sams, USA (2002)
14. Bray, T., Paoli, J., Sperberg-McQueen, C. M., Maler, E., Yergeau, F., Cowan, J.: Extensible markup language (XML) 1.1. W3C Recommendation (2006)
15. Parisot, C.: The DICOM standard: A breakthrough for digital information exchange in cardiology. The International Journal of Cardiac Imaging 11 (3) (1995)
16. Gregg, B., D'Agostino, H., Toledo, E. G.: Creating an IHE ATNA-Based Audit Repository. Journal of Digital Imaging (2006)
17. Smart, J., Hock, K., Csomor, S.: Cross-Platform GUI Programming with wxWidgets. Prentice Hall PTR, Englewood Cliffs (2005)
18. Rosse, C., Mejino Jr., J. L. V.: A reference ontology for biomedical informatics: the Foundational Model of Anatomy. Journal of Biomedical Informatics (2003)
19. Stearns, M. Q., Price, C., Spackman, K. A., Wang, A. Y.: SNOMED clinical terms: overview of the development process and project status. In: Proc. AMIA Symp. (2001)
20. McGuinness, D. L., van Harmelen, F.: OWL web ontology language overview, W3C recommendation (2004)
21. Gamma, E., Helm, R., Johnson, R., Vlissides, J.: Design patterns: elements of reusable object-oriented software. Lavoisier (1995)
22. Nguyen, D.: Abstract Factory Design Pattern. Connexions (2008)
23. Fonseca, C. G., Backhaus, M., Chung, J. D., Tao, W., Medrano-Gracia, P., Cowan, B. R., Hunter, P. J., Finn, J. P., Shivkumar, K., Lima, J. A. C., Bluemke, D. A., Kadish, A. H., Lee, D. C., Young, A. A.: MICCAI 2010 Workshop on Statistical Atlases and Computational Models of the Heart: Mapping Structure and Function plus a Cardiac Electrophysiological Simulation Challenge (STACOM-CESCÕ 2010), Beijing, China. LNCS. Springer, Heidelberg (2010) (in press)
24. Larrabide, I., Omedas, P., Martelli, Y., Planes, X., Nieber, M., Moya, J. A., Butakoff, C., Sebastian, R., Camara, O., De Craene, M., Bijnens, B. H., Frangi, A. F.: GIMIAS: An Open Source Framework for Efficient Development of Research Tools and Clinical Prototypes. LNCS. Springer, Heidelberg (2009)
25. Toussaint, N.: CardioViz3D: Cardiac Simulation Data Processing and Visualization, User Manual, INRIA Sophia-Antipolis (2008)
26. Digital Imaging and Communications in Medicine (DICOM) (2009)
27. MySQL 5.1 Reference Manual, Functions and Operators, XML Functions, http://dev.mysql.com/doc/refman/5.1/en/xml-functions.html
28. XML Path Language (XPath) 2.0, W3C Recommendation (2007), http://www.w3.org/TR/xpath20/
29. U. S. Department of Health and Human Services, Privacy Rule, 45 CFR Parts 160, 162, and 164
30. CAP Sourceforge project site, http://sourceforge.net/projects/ cardiacatlas/
31. Zope, http://www.zope.org/
32. Plone, http://plone.org/
33. Physiome Model Repository, http://www.cellml.org/tools/pmr
34. JBoss Application Server, JBoss Inc. (2002)
35. CMGUI, http://www.cmiss.org/cmgui
36. Gmm++ Library, http://download.gna.org/getfem/html/homepage/gmm/index. html
37. Cardiovascular Research Grid, http://www.cvrgrid.org/
38. Boost C++ Libraries, http://www.boost.org/
39. World Health Organization, Fact sheet No. 317 (Updated September 2009)