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Volumn 5, Issue 7, 2010, Pages

Correcting the bias of empirical frequency parameter estimators in codon models

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SUBSTITUTION; ARTICLE; CONTROLLED STUDY; CURVE FITTING; EMPIRICAL RESEARCH; FREQUENCY ANALYSIS; GENE FREQUENCY; GENETIC MODEL; INTERMETHOD COMPARISON; MATHEMATICAL COMPUTING; MAXIMUM LIKELIHOOD METHOD; NUCLEOTIDE SEQUENCE; QUALITY CONTROL; RELIABILITY; SEQUENCE ALIGNMENT; STATISTICAL MODEL; STOP CODON; SYSTEMATIC ERROR;

EID: 78049359630     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0011230     Document Type: Article
Times cited : (41)

References (13)
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  • 3
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    • Muse, S.V.1    Gaut, B.S.2
  • 4
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    • A codon-based model of nucleotide substitution for protein-coding DNA sequences
    • Goldman N, Yang Z (1994) A codon-based model of nucleotide substitution for protein-coding DNA sequences. Mol Biol Evol 11: 725-736.
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    • Goldman, N.1    Yang, Z.2
  • 5
    • 34047226877 scopus 로고    scopus 로고
    • A model of directional selection applied to the evolution of drug resistance in HIV-1
    • Seoighe C, Ketwaroo F, Pillay V, Scheffler K, Wood N, et al. (2007) A model of directional selection applied to the evolution of drug resistance in HIV-1. Mol Biol Evol 24: 1025-1031.
    • (2007) Mol Biol Evol , vol.24 , pp. 1025-1031
    • Seoighe, C.1    Ketwaroo, F.2    Pillay, V.3    Scheffler, K.4    Wood, N.5
  • 6
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    • A maximum likelihood method for detecting directional evolution in protein sequences and its application to influenza a virus
    • Kosakovsky Pond SL, Poon AFY, Leigh Brown AJ, Frost SDW (2008) A maximum likelihood method for detecting directional evolution in protein sequences and its application to influenza a virus. Mol Biol Evol 25: 1809-1824.
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    • Kosakovsky Pond, S.L.1    Poon, A.F.Y.2    Brown, L.A.J.3    Frost, S.D.W.4
  • 9
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    • Site-to-site variation of synonymous substitution rates
    • Kosakovsky Pond SL, Muse SV (2005) Site-to-site variation of synonymous substitution rates. Mol Biol Evol 22: 2375-2385.
    • (2005) Mol Biol Evol , vol.22 , pp. 2375-2385
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  • 10
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    • Pandit: An evolution-centric database of protein and associated nucleotide domains with inferred trees
    • Whelan S, de Bakker PIW, Quevillon E, Rodriguez N, Goldman N (2006) Pandit: an evolution-centric database of protein and associated nucleotide domains with inferred trees. Nucleic Acids Res 34: D327-31.
    • (2006) Nucleic Acids Res , vol.34
    • Whelan, S.1    de Bakker, P.I.W.2    Quevillon, E.3    Rodriguez, N.4    Goldman, N.5
  • 11
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    • Estimating the dimension of a model
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  • 12
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  • 13
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.