-
1
-
-
0036007687
-
Metabolomics - The link between genotypes and phenotypes
-
Fiehn, O. 2002. Metabolomics - the link between genotypes and phenotypes. Plant Mol. Biol. 48:155-171.
-
(2002)
Plant Mol. Biol.
, vol.48
, pp. 155-171
-
-
Fiehn, O.1
-
2
-
-
26944471174
-
The next wave in metabolome analysis
-
Nielsen, J. and S. Oliver. 2005. The next wave in metabolome analysis. Trends Biotechnol. 23:544-546.
-
(2005)
Trends Biotechnol.
, vol.23
, pp. 544-546
-
-
Nielsen, J.1
Oliver, S.2
-
3
-
-
0033757963
-
Metabolite profiling for plant functional genomics
-
Fiehn, O., J. Kopka, P. Dörmann, T. Altmann, R.N. Trethewey, and L. Willmitzer. 2000. Metabolite profiling for plant functional genomics. Nat. Biotechnol. 18:1157-1161.
-
(2000)
Nat. Biotechnol.
, vol.18
, pp. 1157-1161
-
-
Fiehn, O.1
Kopka, J.2
Dörmann, P.3
Altmann, T.4
Trethewey, R.N.5
Willmitzer, L.6
-
4
-
-
0036388279
-
Metabonomics: The use of electrospray mass spectrometry coupled to reversed-phase liquid chromatography shows potential for the screening of rat urine in drug development
-
Plumb, R.S., C.L. Stumpf, M.V. Gorenstein, J.M. Castro-Perez, G.J. Dear, M. Anthony, B.C. Sweatman, S.C. Connor, and J.N. Haselden. 2002. Metabonomics: the use of electrospray mass spectrometry coupled to reversed-phase liquid chromatography shows potential for the screening of rat urine in drug development. Rapid Commun. Mass Spectrom. 16:1991-1996.
-
(2002)
Rapid Commun. Mass Spectrom.
, vol.16
, pp. 1991-1996
-
-
Plumb, R.S.1
Stumpf, C.L.2
Gorenstein, M.V.3
Castro-Perez, J.M.4
Dear, G.J.5
Anthony, M.6
Sweatman, B.C.7
Connor, S.C.8
Haselden, J.N.9
-
5
-
-
0242569355
-
Quantitative Metabolome Analysis Using Capillary Electrophoresis Mass Spectrometry
-
DOI 10.1021/pr034020m
-
Soga, T., Y. Ohashi, Y. Ueno, H. Naraoka, M. Tomita, and T. Nishioka. 2003. Quantitative metabolome analysis using capillary electrophoresis mass spectrometry. J. Proteome Res. 2:488-494. (Pubitemid 37376843)
-
(2003)
Journal of Proteome Research
, vol.2
, Issue.5
, pp. 488-494
-
-
Soga, T.1
Ohashi, Y.2
Ueno, Y.3
Naraoka, H.4
Tomita, M.5
Nishioka, T.6
-
6
-
-
28044440100
-
Global metabolite analysis of yeast: Evaluation of sample preparation methods
-
DOI 10.1002/yea.1308
-
Villas-Boas, S.G., J. Hojer-Pedersen, M. Akesson, J. Smedsgaard, and J. Nielsen. 2005. Global metabolite analysis of yeast: evaluation of sample preparation methods. Yeast 22:1155-1169. (Pubitemid 41684146)
-
(2005)
Yeast
, vol.22
, Issue.14
, pp. 1155-1169
-
-
Villas-Boas, S.G.1
Hojer-Pedersen, J.2
Akesson, M.3
Smedsgaard, J.4
Nielsen, J.5
-
7
-
-
4043063503
-
Metabolite profiling in plant biology: Platforms and destinations
-
DOI 10.1186/gb-2004-5-6-109
-
Kopka, J., A. Fernie, W. Weckwerth, Y. Gibon, and M. Stitt. 2004. Metabolite profiling in plant biology: platforms and destinations. Genome Biol. 5:109. (Pubitemid 39077450)
-
(2004)
Genome Biology
, vol.5
, Issue.6
, pp. 109
-
-
Kopka, J.1
Fernie, A.2
Weckwerth, W.3
Gibon, Y.4
Stitt, M.5
-
8
-
-
34249088019
-
Sampling for metabolome analysis of microorganisms
-
Bolten, C.J., P. Kiefer, F. Letisse, J.C. Portais, and C. Wittmann. 2007. Sampling for metabolome analysis of microorganisms. Anal. Chem. 79:3843-3849.
-
(2007)
Anal. Chem.
, vol.79
, pp. 3843-3849
-
-
Bolten, C.J.1
Kiefer, P.2
Letisse, F.3
Portais, J.C.4
Wittmann, C.5
-
9
-
-
43649098283
-
High quality metabolomic data for Chlamydomonas reinhardtii
-
Lee, D.Y. and O. Fiehn. 2008. High quality metabolomic data for Chlamydomonas reinhardtii. Plant Methods 4:7.
-
(2008)
Plant Methods
, vol.4
, pp. 7
-
-
Lee, D.Y.1
Fiehn, O.2
-
10
-
-
32444451016
-
Solvent-dependent metabolite distribution, clustering, and protein extraction for serum profiling with mass spectrometry
-
Want, E.J., G. O'Maille, C.A. Smith, T.R. Brandon, W. Uritboonthai, C. Qin, S.A. Trauger, and G. Siuzdak. 2006. Solvent-dependent metabolite distribution, clustering, and protein extraction for serum profiling with mass spectrometry. Anal. Chem. 78:743-752.
-
(2006)
Anal. Chem.
, vol.78
, pp. 743-752
-
-
Want, E.J.1
O'Maille, G.2
Smith, C.A.3
Brandon, T.R.4
Uritboonthai, W.5
Qin, C.6
Trauger, S.A.7
Siuzdak, G.8
-
11
-
-
3242741850
-
Design of experiments: An efficient strategy to identify factors influencing extraction and derivatization of Arabidopsis thaliana samples in metabolomic studies with gas chromatography/mass spectrometry
-
Gullberg, J., P. Jonsson, A. Nordström, M. Sjöström, and T. Moritz. 2004. Design of experiments: an efficient strategy to identify factors influencing extraction and derivatization of Arabidopsis thaliana samples in metabolomic studies with gas chromatography/mass spectrometry. Anal. Biochem. 331:283-295.
-
(2004)
Anal. Biochem.
, vol.331
, pp. 283-295
-
-
Gullberg, J.1
Jonsson, P.2
Nordström, A.3
Sjöström, M.4
Moritz, T.5
-
12
-
-
33144485880
-
Microbial metabolomics with gas chromatography/mass spectrometry
-
Koek, M.M., B. Muilwijk, M.J. van der Werf, and T. Hankemeier. 2006. Microbial metabolomics with gas chromatography/mass spectrometry. Anal. Chem. 78:1272-1281.
-
(2006)
Anal. Chem.
, vol.78
, pp. 1272-1281
-
-
Koek, M.M.1
Muilwijk, B.2
Van Der Werf, M.J.3
Hankemeier, T.4
-
13
-
-
34248580879
-
Gas chromatography mass spectrometry-based metabolite profiling in plants
-
Lisec, J., N. Schauer, J. Kopka, L. Willmitzer, and A.R. Fernie. 2006. Gas chromatography mass spectrometry-based metabolite profiling in plants. Nat. Protocols 1:387-396.
-
(2006)
Nat. Protocols
, vol.1
, pp. 387-396
-
-
Lisec, J.1
Schauer, N.2
Kopka, J.3
Willmitzer, L.4
Fernie, A.R.5
-
15
-
-
0036535168
-
A method for the analysis of low-mass molecules by MALDI-TOF mass spectrometry
-
Guo, Z., Q. Zhang, H. Zou, B. Guo, and J. Ni. 2002. A method for the analysis of low-mass molecules by MALDI-TOF mass spectrometry. Anal. Chem. 74:1637-1641.
-
(2002)
Anal. Chem.
, vol.74
, pp. 1637-1641
-
-
Guo, Z.1
Zhang, Q.2
Zou, H.3
Guo, B.4
Ni, J.5
-
16
-
-
4444351113
-
Small-molecule MALDI using the matrix suppression effect to reduce or eliminate matrix background interferences
-
McCombie, G. and R. Knochenmuss. 2004. Small-molecule MALDI using the matrix suppression effect to reduce or eliminate matrix background interferences. Anal. Chem. 76:4990-4997.
-
(2004)
Anal. Chem.
, vol.76
, pp. 4990-4997
-
-
McCombie, G.1
Knochenmuss, R.2
-
17
-
-
0242606377
-
Direct analysis of drug candidates in tissue by matrix-assisted laser desorption/ionization mass spectrometry
-
DOI 10.1002/jms.525
-
Reyzer, M.L., Y. Hsieh, K. Ng, W.A. Korfmacher, and R.M. Caprioli. 2003. Direct analysis of drug candidates in tissue by matrix-assisted laser desorption/ionization mass spectrometry. J. Mass Spectrom. 38:1081-1092. (Pubitemid 37407703)
-
(2003)
Journal of Mass Spectrometry
, vol.38
, Issue.10
, pp. 1081-1092
-
-
Reyzer, M.L.1
Hsieh, Y.2
Ng, K.3
Korfmacher, W.A.4
Caprioli, R.M.5
-
18
-
-
35548992879
-
Clathrate nanostructures for mass spectrometry
-
Northen, T.R., O. Yanes, M.T. Northen, D. Marrinucci, W. Uritboonthai, J. Apon, S.L. Golledge, A. Nordström, and G. Siuzdak. 2007. Clathrate nanostructures for mass spectrometry. Nature 449:1033-1036.
-
(2007)
Nature
, vol.449
, pp. 1033-1036
-
-
Northen, T.R.1
Yanes, O.2
Northen, M.T.3
Marrinucci, D.4
Uritboonthai, W.5
Apon, J.6
Golledge, S.L.7
Nordström, A.8
Siuzdak, G.9
-
19
-
-
32444432587
-
METLIN - A metabolite mass spectral database
-
Smith, C.A., G. O'Maille, E.J. Want, C. Qin, S.A. Trauger, T.R. Brandon, D.E. Custodio, R. Abagyan, and G. Siuzdak. 2005. METLIN - A metabolite mass spectral database. Ther. Drug Monit. 27:747-751.
-
(2005)
Ther. Drug Monit.
, vol.27
, pp. 747-751
-
-
Smith, C.A.1
O'Maille, G.2
Want, E.J.3
Qin, C.4
Trauger, S.A.5
Brandon, T.R.6
Custodio, D.E.7
Abagyan, R.8
Siuzdak, G.9
-
20
-
-
34247163207
-
Seven Golden Rules for heuristic filtering of molecular formulas obtained by accurate mass spectrometry
-
DOI 10.1186/1471-2105-8-105
-
Kind, T. and O. Fiehn. 2007. Seven golden rules for heuristic filtering of molecular formulas obtained by accurate mass spectrometry. BMC Bioinformatics 8:105. (Pubitemid 46584995)
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 105
-
-
Kind, T.1
Fiehn, O.2
-
21
-
-
73349121270
-
An introduction to liquid chromatography-mass spectrometry instrumentation applied in plant metabolomic analyses
-
Allwood, J.W. and R. Goodacre. 2009. An introduction to liquid chromatography-mass spectrometry instrumentation applied in plant metabolomic analyses. Phytochem. Anal. 21:33-47.
-
(2009)
Phytochem. Anal.
, vol.21
, pp. 33-47
-
-
Allwood, J.W.1
Goodacre, R.2
-
22
-
-
1442306962
-
Debating resolution and mass accuracy
-
Balogh, M.P. 2004. Debating resolution and mass accuracy. LCGC North America 22:118-131.
-
(2004)
LCGC North America
, vol.22
, pp. 118-131
-
-
Balogh, M.P.1
-
23
-
-
12344282661
-
Principles of Fourier transform ion cyclotron resonance mass spectrometry and its application in structural biology
-
DOI 10.1039/b403880k
-
Barrow, M.P., W.I. Burkitt, and P.J. Derrick. 2005. Principles of Fourier transform ion cyclotron resonance mass spectrometry and its application in structural biology. Analyst 130:18-28. (Pubitemid 40129136)
-
(2005)
Analyst
, vol.130
, Issue.1
, pp. 18-28
-
-
Barrow, M.P.1
Burkitt, W.I.2
Derrick, P.J.3
-
24
-
-
18344364097
-
The Orbitrap: A new mass spectrometer
-
Hu, Q., R.J. Noll, H. Li, A. Makarov, M. Hardman, and R. Graham Cooks. 2005. The Orbitrap: a new mass spectrometer. J. Mass Spectrom. 40:430-443.
-
(2005)
J. Mass Spectrom.
, vol.40
, pp. 430-443
-
-
Hu, Q.1
Noll, R.J.2
Li, H.3
Makarov, A.4
Hardman, M.5
Cooks, R.G.6
-
25
-
-
50349092811
-
Absolute quantitation of intracellular metabolite concentrations by an isotope ratiobased approach
-
Bennett, B.D., J. Yuan, E.H. Kimball, and J.D. Rabinowitz. 2008. Absolute quantitation of intracellular metabolite concentrations by an isotope ratiobased approach. Nat. Protocols 3:1299-1311.
-
(2008)
Nat. Protocols
, vol.3
, pp. 1299-1311
-
-
Bennett, B.D.1
Yuan, J.2
Kimball, E.H.3
Rabinowitz, J.D.4
-
26
-
-
0027395318
-
Rapid diagnosis of phenylketonuria by quantitative analysis for phenylalanine and tyrosine in neonatal blood spots by tandem mass spectrometry
-
Chace, D.H., D.S. Millington, N. Terada, S.G. Kahler, C.R. Roe, and L.F. Hofman. 1993. Rapid diagnosis of phenylketonuria by quantitative analysis for phenylalanine and tyrosine in neonatal blood spots by tandem mass spectrometry. Clin. Chem. 39:66-71.
-
(1993)
Clin. Chem.
, vol.39
, pp. 66-71
-
-
Chace, D.H.1
Millington, D.S.2
Terada, N.3
Kahler, S.G.4
Roe, C.R.5
Hofman, L.F.6
-
27
-
-
23244467785
-
Monitoring enzymatic conversions by mass spectrometry: A critical review
-
Liesener, A. and U. Karst. 2005. Monitoring enzymatic conversions by mass spectrometry: a critical review. Anal. Bioanal. Chem. 382:1451-1464.
-
(2005)
Anal. Bioanal. Chem.
, vol.382
, pp. 1451-1464
-
-
Liesener, A.1
Karst, U.2
-
28
-
-
3042706057
-
Discovery of the chemical function of glycosidases: Design, synthesis, and evaluation of mass-differentiated carbohydrate libraries
-
Yu, Y., K. Ko, C. Zea, and N. Pohl. 2004. Discovery of the chemical function of glycosidases: design, synthesis, and evaluation of mass-differentiated carbohydrate libraries. Org. Lett. 6:2031-2033.
-
(2004)
Org. Lett.
, vol.6
, pp. 2031-2033
-
-
Yu, Y.1
Ko, K.2
Zea, C.3
Pohl, N.4
-
29
-
-
23744479843
-
In vitro characterization of salmochelin and enterobactin trilactone hydrolases IroD, IroE, and Fes
-
Lin, H., M.A. Fischbach, D.R. Liu, and C.T. Walsh. 2005. In vitro characterization of salmochelin and enterobactin trilactone hydrolases IroD, IroE, and Fes. J. Am. Chem. Soc. 127:11075-11084.
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 11075-11084
-
-
Lin, H.1
Fischbach, M.A.2
Liu, D.R.3
Walsh, C.T.4
-
30
-
-
14144253168
-
In vitro characterization of IroB, a pathogen-associated C-glycosyltransferase
-
Fischbach, M.A., H. Lin, D.R. Liu, and C.T. Walsh. 2005. In vitro characterization of IroB, a pathogen-associated C-glycosyltransferase. Proc. Natl. Acad. Sci. USA 102:571-576.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 571-576
-
-
Fischbach, M.A.1
Lin, H.2
Liu, D.R.3
Walsh, C.T.4
-
31
-
-
44949177487
-
Characterization of orphan monooxygenases by rapid substrate screening using FT-ICR mass spectrometry
-
Furuya, T., T. Nishi, D. Shibata, H. Suzuki, D. Ohta, and K. Kino. 2008. Characterization of orphan monooxygenases by rapid substrate screening using FT-ICR mass spectrometry. Chem. Biol. 15:563-572.
-
(2008)
Chem. Biol.
, vol.15
, pp. 563-572
-
-
Furuya, T.1
Nishi, T.2
Shibata, D.3
Suzuki, H.4
Ohta, D.5
Kino, K.6
-
32
-
-
34248512719
-
Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry
-
De Vos, R.C.H., S. Moco, A. Lommen, J.J.B. Keurentjes, R.J. Bino, and R.D. Hall. 2007. Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry. Nat. Protocols 2:778-791.
-
(2007)
Nat. Protocols
, vol.2
, pp. 778-791
-
-
De Vos, R.C.H.1
Moco, S.2
Lommen, A.3
Keurentjes, J.J.B.4
Bino, R.J.5
Hall, R.D.6
-
33
-
-
45849153463
-
Separation and mass spectro metry in microbial metabolomics
-
Garcia, D.E., E.E. Baidoo, P.I. Benke, F. Pingitore, Y.J. Tang, S. Villa, and J.D. Keasling. 2008. Separation and mass spectro metry in microbial metabolomics. Curr. Opin. Microbiol. 11:233-239.
-
(2008)
Curr. Opin. Microbiol.
, vol.11
, pp. 233-239
-
-
Garcia, D.E.1
Baidoo, E.E.2
Benke, P.I.3
Pingitore, F.4
Tang, Y.J.5
Villa, S.6
Keasling, J.D.7
-
34
-
-
38349103941
-
Multiple ionization mass spectrometry strategy used to reveal the complexity of metabolomics
-
Nordstrom, A., E. Want, T. Northen, J. Lehtio, and G. Siuzdak. 2008. Multiple ionization mass spectrometry strategy used to reveal the complexity of metabolomics. Anal. Chem. 80:421-429.
-
(2008)
Anal. Chem.
, vol.80
, pp. 421-429
-
-
Nordstrom, A.1
Want, E.2
Northen, T.3
Lehtio, J.4
Siuzdak, G.5
-
35
-
-
32444446805
-
XCMS: Processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification
-
Smith, C.A., E.J. Want, G. O'Maille, R. Abagyan, and G. Siuzdak. 2006. XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification. Anal. Chem. 78:779-787.
-
(2006)
Anal. Chem.
, vol.78
, pp. 779-787
-
-
Smith, C.A.1
Want, E.J.2
O'Maille, G.3
Abagyan, R.4
Siuzdak, G.5
-
36
-
-
33747180294
-
A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS
-
Bellew, M., M. Coram, M. Fitzgibbon, M. Igra, T. Randolph, P. Wang, D. May, J. Eng, et al. 2006. A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS. Bioinformatics 22:1902-1909.
-
(2006)
Bioinformatics
, vol.22
, pp. 1902-1909
-
-
Bellew, M.1
Coram, M.2
Fitzgibbon, M.3
Igra, M.4
Randolph, T.5
Wang, P.6
May, D.7
Eng, J.8
-
37
-
-
34347405493
-
Data processing for mass spectrometrybased metabolomics
-
Katajamaa, M. and M. Orešič. 2007. Data processing for mass spectrometrybased metabolomics. J. Chromatogr. A 1158:318-328.
-
(2007)
J. Chromatogr. A
, vol.1158
, pp. 318-328
-
-
Katajamaa, M.1
Orešič, M.2
-
38
-
-
0037731046
-
Application of metabolomics to plant genotype discrimination using statistics and machine learning
-
Taylor, J., R.D. King, T. ltmann, and O. Fiehn. 2002. Application of metabolomics to plant genotype discrimination using statistics and machine learning. Bioinformatics 18:S241-S248.
-
(2002)
Bioinformatics
, vol.18
-
-
Taylor, J.1
King, R.D.2
Ltmann, T.3
Fiehn, O.4
-
39
-
-
68149099597
-
Metabolomics reveals metabolic biomarkers of Crohn's disease
-
Jansson, J., B. Willing, M. Lucio, A. Fekete, J. Dicksved, J. Halfvarson, C. Tysk, and P. Schmitt-Kopplin. 2009. Metabolomics reveals metabolic biomarkers of Crohn's disease. PLoS One 4:e6386.
-
(2009)
PLoS One
, vol.4
-
-
Jansson, J.1
Willing, B.2
Lucio, M.3
Fekete, A.4
Dicksved, J.5
Halfvarson, J.6
Tysk, C.7
Schmitt-Kopplin, P.8
-
40
-
-
38849104440
-
UPLC-ESI-TOFMS-based metabolomics and gene expression dynamics inspector self-organizing metabolomic maps as tools for understanding the cellular response to ionizing radiation
-
Patterson, A.D., H. Li, G.S. Eichler, K.W. Krausz, J.N. Weinstein, A.J. Fornace, Jr., F.J. Gonzalez, and J.R. Idle. 2008. UPLC-ESI-TOFMS-based metabolomics and gene expression dynamics inspector self-organizing metabolomic maps as tools for understanding the cellular response to ionizing radiation. Anal. Chem. 80:665-674.
-
(2008)
Anal. Chem.
, vol.80
, pp. 665-674
-
-
Patterson, A.D.1
Li, H.2
Eichler, G.S.3
Krausz, K.W.4
Weinstein, J.N.5
Fornace Jr., A.J.6
Gonzalez, F.J.7
Idle, J.R.8
-
41
-
-
0033982936
-
KEGG: Kyoto Encyclopedia of Genes and Genomes
-
Kanehisa, M. and S. Goto. 2000. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res. 28:27-30. (Pubitemid 30047706)
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.1
, pp. 27-30
-
-
Kanehisa, M.1
Goto, S.2
-
42
-
-
20244380782
-
GMD@CSB.DB: The Golm Metabolome Database
-
Kopka, J., N. Schauer, S. Krueger, C. Birkemeyer, B. Usadel, E. Bergmuller, P. Dormann, W. Weckwerth, et al. 2005. GMD@CSB.DB: the Golm Metabolome Database. Bioinformatics 21:1635-1638.
-
(2005)
Bioinformatics
, vol.21
, pp. 1635-1638
-
-
Kopka, J.1
Schauer, N.2
Krueger, S.3
Birkemeyer, C.4
Usadel, B.5
Bergmuller, E.6
Dormann, P.7
Weckwerth, W.8
-
43
-
-
33846088138
-
HMDB: The human metabolome database
-
Wishart, D.S., D. Tzur, C. Knox, R. Eisner, A.C. Guo, N. Young, D. Cheng, K. Jewell, et al. 2007. HMDB: the human metabolome database. Nucleic Acids Res. 35:D521-D526.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Wishart, D.S.1
Tzur, D.2
Knox, C.3
Eisner, R.4
Guo, A.C.5
Young, N.6
Cheng, D.7
Jewell, K.8
-
45
-
-
33846634149
-
Pathway confirmation and flux analysis of central metabolic pathways in Desulfovibrio vulgaris hildenborough using gas chromatography-mass spectrometry and Fourier transform-ion cyclotron resonance mass spectrometry
-
Tang, Y., F. Pingitore, A. Mukhopadhyay, R. Phan, T.C. Hazen, and J.D. Keasling. 2007. Pathway confirmation and flux analysis of central metabolic pathways in Desulfovibrio vulgaris hildenborough using gas chromatography-mass spectrometry and Fourier transform-ion cyclotron resonance mass spectrometry. J. Bacteriol. 189:940-949.
-
(2007)
J. Bacteriol.
, vol.189
, pp. 940-949
-
-
Tang, Y.1
Pingitore, F.2
Mukhopadhyay, A.3
Phan, R.4
Hazen, T.C.5
Keasling, J.D.6
-
46
-
-
33846061120
-
13C-based flux analysis
-
13C-based flux analysis. Mol. Syst. Biol. 2:62.
-
(2006)
Mol. Syst. Biol.
, vol.2
, pp. 62
-
-
Sauer, U.1
-
47
-
-
0842327199
-
Integration of knowledge-based metabolic predictions with liquid chromatography data-dependent tandem mass spectrometry for drug metabolism studies: Application to studies on the biotransformation of indinavir
-
Anari, M.R., R.I. Sanchez, R. Bakhtiar, R.B. Franklin, and T.A. Baillie. 2004. Integration of knowledge-based metabolic predictions with liquid chromatography data-dependent tandem mass spectrometry for drug metabolism studies: application to studies on the biotransformation of indinavir. Anal. Chem. 76:823-832.
-
(2004)
Anal. Chem.
, vol.76
, pp. 823-832
-
-
Anari, M.R.1
Sanchez, R.I.2
Bakhtiar, R.3
Franklin, R.B.4
Baillie, T.A.5
-
48
-
-
79954566035
-
Decision tree supported substructure prediction of metabolites from GC-MS profiles
-
Hummel, J., N. Strehmel, J. Selbig, D. Walther, and J. Kopka. 2010. Decision tree supported substructure prediction of metabolites from GC-MS profiles. Metabolomics 6:322-333.
-
(2010)
Metabolomics
, vol.6
, pp. 322-333
-
-
Hummel, J.1
Strehmel, N.2
Selbig, J.3
Walther, D.4
Kopka, J.5
-
49
-
-
77950974821
-
Determination of elemental compositions by gas chromatography/time-of- flight mass spectrometry using chemical and electron ionization
-
Abate, S., Y.G. Ahn, T. Kind, T.R.I. Cataldi, and O. Fiehn. 2010. Determination of elemental compositions by gas chromatography/time-of-flight mass spectrometry using chemical and electron ionization. Rapid Commun. Mass Spectrom. 24:1172-1180.
-
(2010)
Rapid Commun. Mass Spectrom.
, vol.24
, pp. 1172-1180
-
-
Abate, S.1
Ahn, Y.G.2
Kind, T.3
Cataldi, T.R.I.4
Fiehn, O.5
-
50
-
-
8544253237
-
Assignment of endogenous substrates to enzymes by global metabolite profiling
-
DOI 10.1021/bi0480335
-
Saghatelian, A., S.A. Trauger, E.J. Want, E.G. Hawkins, G. Siuzdak, and B.F. Cravatt. 2004. Assignment of endogenous substrates to enzymes by global metabolite profiling. Biochemistry 43:14332-14339. (Pubitemid 39491967)
-
(2004)
Biochemistry
, vol.43
, Issue.45
, pp. 14332-14339
-
-
Saghatelian, A.1
Trauger, S.A.2
Want, E.J.3
Hawkins, E.G.4
Siuzdak, G.5
Cravatt, B.F.6
-
51
-
-
0035799319
-
Profiling serine hydrolase activities in complex proteomes
-
DOI 10.1021/bi002579j
-
Kidd, D., Y. Liu, and B.F. Cravatt. 2001. Profiling serine hydrolase activities in complex proteomes. Biochemistry 40:4005-4015. (Pubitemid 32280438)
-
(2001)
Biochemistry
, vol.40
, Issue.13
, pp. 4005-4015
-
-
Kidd, D.1
Liu, Y.2
Cravatt, B.F.3
-
52
-
-
1942522084
-
Profiling enzyme activities in vivo using click chemistry methods
-
Speers, A.E. and B.F. Cravatt. 2004. Profiling enzyme activities in vivo using click chemistry methods. Chem. Biol. 11:535-546.
-
(2004)
Chem. Biol.
, vol.11
, pp. 535-546
-
-
Speers, A.E.1
Cravatt, B.F.2
-
53
-
-
0036678119
-
Enzyme activity profiles of the secreted and membrane proteome that depict cancer cell invasiveness
-
Jessani, N., Y. Liu, M. Humphrey, and B.F. Cravatt. 2002. Enzyme activity profiles of the secreted and membrane proteome that depict cancer cell invasiveness. Proc. Natl. Acad. Sci. USA 99:10335-10340.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 10335-10340
-
-
Jessani, N.1
Liu, Y.2
Humphrey, M.3
Cravatt, B.F.4
-
54
-
-
0037462106
-
Activity-based protein profiling in vivo using a copper(I)-catalyzed azide-alkyne [3 + 2] cycloaddition
-
Speers, A.E., G.C. Adam, and B.F. Cravatt. 2003. Activity-based protein profiling in vivo using a copper(I)-catalyzed azide-alkyne [3 + 2] cycloaddition. J. Am. Chem. Soc. 125:4686-4687.
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 4686-4687
-
-
Speers, A.E.1
Adam, G.C.2
Cravatt, B.F.3
-
55
-
-
0034710882
-
Mass spectrometry and immobilized enzymes for the screening of inhibitor libraries
-
Cancilla, M.T., M.D. Leavell, J. Chow, and J.A. Leary. 2000. Mass spectrometry and immobilized enzymes for the screening of inhibitor libraries. Proc. Natl. Acad. Sci. USA 97:12008-12013.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 12008-12013
-
-
Cancilla, M.T.1
Leavell, M.D.2
Chow, J.3
Leary, J.A.4
-
56
-
-
0242354926
-
Parallel determination of multiple protein metabolite interactions using cell extract, protein microarrays and mass spectrometric detection
-
Morozov, V.N., T.Y. Morozova, K.L. Johnson, and S. Naylor. 2003. Parallel determination of multiple protein metabolite interactions using cell extract, protein microarrays and mass spectrometric detection. Rapid Commun. Mass Spectrom. 17:2430-2438.
-
(2003)
Rapid Commun. Mass Spectrom.
, vol.17
, pp. 2430-2438
-
-
Morozov, V.N.1
Morozova, T.Y.2
Johnson, K.L.3
Naylor, S.4
-
57
-
-
62649105337
-
Identification of a new endogenous metabolite and the characterization of its protein interactions through an immobilization approach
-
Kalisiak, J., S.A. Trauger, E. Kalisiak, H. Morita, V.V. Fokin, M.W.W. Adams, K.B. Sharpless, and G. Siuzdak. 2009. Identification of a new endogenous metabolite and the characterization of its protein interactions through an immobilization approach. J. Am. Chem. Soc. 131:378-386.
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 378-386
-
-
Kalisiak, J.1
Trauger, S.A.2
Kalisiak, E.3
Morita, H.4
Fokin, V.V.5
Adams, M.W.W.6
Sharpless, K.B.7
Siuzdak, G.8
-
58
-
-
41649092954
-
A nanostructure-initiator mass spectrometry-based enzyme activity assay
-
Northen, T.R., J.C. Lee, L. Hoang, J. Raymond, D.R. Hwang, S.M. Yannone, C.H. Wong, and G. Siuzdak. 2008. A nanostructure-initiator mass spectrometry-based enzyme activity assay. Proc. Natl. Acad. Sci. USA 105:3678-3683.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 3678-3683
-
-
Northen, T.R.1
Lee, J.C.2
Hoang, L.3
Raymond, J.4
Hwang, D.R.5
Yannone, S.M.6
Wong, C.H.7
Siuzdak, G.8
-
59
-
-
43849104156
-
On-chip synthesis and label-free assays of oligosaccharide arrays
-
Ban, L. and M. Mrksich. 2008. On-chip synthesis and label-free assays of oligosaccharide arrays. Angew. Chem. Int. Ed. Engl. 47:3396-3399.
-
(2008)
Angew. Chem. Int. Ed. Engl.
, vol.47
, pp. 3396-3399
-
-
Ban, L.1
Mrksich, M.2
-
60
-
-
35848970035
-
MALDI imaging mass spectrometry: Molecular snapshots of biochemical systems
-
DOI 10.1038/nmeth1094, PII NMETH1094
-
Cornett, D.S., M.L. Reyzer, P. Chaurand, and R.M. Caprioli. 2007. MALDI imaging mass spectrometry: molecular snapshots of biochemical systems. Nat. Methods 4:828-833. (Pubitemid 350055580)
-
(2007)
Nature Methods
, vol.4
, Issue.10
, pp. 828-833
-
-
Cornett, D.S.1
Reyzer, M.L.2
Chaurand, P.3
Caprioli, R.M.4
-
61
-
-
16244363702
-
The Magic of Cluster SIMS
-
Winograd, N. 2005. The Magic of Cluster SIMS. Anal. Chem. 77:142A-149A.
-
(2005)
Anal. Chem.
, vol.77
-
-
Winograd, N.1
-
62
-
-
33751008091
-
Tissue imaging at atmospheric pressure using desorption electrospray ionization (DESI) mass spectrometry
-
Wiseman, J.M., D.R. Ifa, Q. Song, and R.G. Cooks. 2006. Tissue imaging at atmospheric pressure using desorption electrospray ionization (DESI) mass spectrometry. Angew. Chem. Int. Ed. Engl. 45:7188-7192.
-
(2006)
Angew. Chem. Int. Ed. Engl.
, vol.45
, pp. 7188-7192
-
-
Wiseman, J.M.1
Ifa, D.R.2
Song, Q.3
Cooks, R.G.4
|