-
1
-
-
0002154022
-
A new method for non-parametric multivariate analysis of variance
-
Anderson MJ. (2001). A new method for non-parametric multivariate analysis of variance. Austral Ecol 26: 32-46.
-
(2001)
Austral Ecol
, vol.26
, pp. 32-46
-
-
Anderson, M.J.1
-
2
-
-
0001930098
-
Extraction of DNA from the phylosphere
-
Trevors J, van Elsas JD (eds)Springer-Verlag: Berlin
-
Bailey MJ. (1995). Extraction of DNA from the phylosphere. In: Trevors J, van Elsas JD (eds). Nucleic Acids in the Environment. Springer-Verlag: Berlin. pp 89-109.
-
(1995)
Nucleic Acids in the Environment
, pp. 89-109
-
-
Bailey, M.J.1
-
3
-
-
0035964859
-
Neutral macroecology
-
Bell G. (2001). Neutral macroecology. Science 293: 2413-2418.
-
(2001)
Science
, vol.293
, pp. 2413-2418
-
-
Bell, G.1
-
4
-
-
22544432221
-
Larger islands house more bacterial taxa
-
Bell T, Ager D, Song J-I, Newman JA, Thompson IP, Lilley AK et al. (2005). Larger islands house more bacterial taxa. Science 308: 1884.
-
(2005)
Science
, vol.308
, pp. 1884
-
-
Bell, T.1
Ager, D.2
Song, J.-I.3
Newman, J.A.4
Thompson, I.P.5
Lilley, A.K.6
-
5
-
-
0037283733
-
An experimental test of local adaptation in soil bacteria
-
Belotte D, Curien JB, Maclean RC, Bell G. (2003). An experimental test of local adaptation in soil bacteria. Evolution 57: 27-36.
-
(2003)
Evolution
, vol.57
, pp. 27-36
-
-
Belotte, D.1
Curien, J.B.2
MacLean, R.C.3
Bell, G.4
-
6
-
-
34548235824
-
Interpreting ecological diversity indices applied to terminal restriction fragment length polymorphism data: Insights from simulated microbial communities
-
Blackwood CB, Hudleston D, Zak DR, Buyer JS. (2007). Interpreting ecological diversity indices applied to terminal restriction fragment length polymorphism data: insights from simulated microbial communities. Appl Environ Microbiol 73: 5276.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5276
-
-
Blackwood, C.B.1
Hudleston, D.2
Zak, D.R.3
Buyer, J.S.4
-
7
-
-
0027039362
-
Resource limitation, habitat segregation, and species interactions of British tree-hole mosquitos in nature
-
Bradshaw WE, Holzapfel CM. (1992). Resource limitation, habitat segregation, and species interactions of British tree-hole mosquitos in nature. Oecologia 90: 227-237.
-
(1992)
Oecologia
, vol.90
, pp. 227-237
-
-
Bradshaw, W.E.1
Holzapfel, C.M.2
-
8
-
-
3042757014
-
Microcosm experiments have limited relevance for community and ecosystem ecology
-
Carpenter SR. (1996). Microcosm experiments have limited relevance for community and ecosystem ecology. Ecology 77: 677-680.
-
(1996)
Ecology
, vol.77
, pp. 677-680
-
-
Carpenter, S.R.1
-
9
-
-
0034467820
-
Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soil
-
Cho J-C, Tiedje JM. (2000). Biogeography and degree of endemicity of fluorescent Pseudomonas strains in soil. Appl Environ Microbiol 66: 5448-5456.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 5448-5456
-
-
Cho, J.-C.1
Tiedje, J.M.2
-
10
-
-
0027804103
-
Non-parametric multivariate analyses of changes in community structure
-
Clarke KR. (1993). Non-parametric multivariate analyses of changes in community structure. Austral Ecol 18: 117-143.
-
(1993)
Austral Ecol
, vol.18
, pp. 117-143
-
-
Clarke, K.R.1
-
11
-
-
33947236971
-
Toward an ecological classification of soil bacteria
-
Fierer N, Bradford MA, Jackson RB. (2007). Toward an ecological classification of soil bacteria. Ecology 88: 1354-1364.
-
(2007)
Ecology
, vol.88
, pp. 1354-1364
-
-
Fierer, N.1
Bradford, M.A.2
Jackson, R.B.3
-
12
-
-
31444447130
-
The diversity and biogeography of soil bacterial communities
-
Fierer N, Jackson RB. (2006). The diversity and biogeography of soil bacterial communities. Proc Natl Acad Sci USA 103: 626-631.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 626-631
-
-
Fierer, N.1
Jackson, R.B.2
-
13
-
-
0037721460
-
Multi-scale variation in spatial heterogeneity for microbial community structure in an eastern Virginia agricultural field
-
Franklin RB, Mills AL. (2003). Multi-scale variation in spatial heterogeneity for microbial community structure in an eastern Virginia agricultural field. FEMS Microbiol Ecol 44: 335-346.
-
(2003)
FEMS Microbiol Ecol
, vol.44
, pp. 335-346
-
-
Franklin, R.B.1
Mills, A.L.2
-
14
-
-
33747174849
-
Spatial scaling of microbial biodiversity
-
Green J, Bohannan BJM. (2006). Spatial scaling of microbial biodiversity. Trends Ecol Evol 21: 501-507.
-
(2006)
Trends Ecol Evol
, vol.21
, pp. 501-507
-
-
Green, J.1
Bohannan, B.J.M.2
-
15
-
-
10644260347
-
Spatial scaling of microbial eukaryotic diversity
-
Green JL, Holmes AJ, Westoby M, Oliver I, Briscoe D, Dangerfield M et al. (2004). Spatial scaling of microbial eukaryotic diversity. Nature 432: 747-750.
-
(2004)
Nature
, vol.432
, pp. 747-750
-
-
Green, J.L.1
Holmes, A.J.2
Westoby, M.3
Oliver, I.4
Briscoe, D.5
Dangerfield, M.6
-
19
-
-
44449178480
-
Resource partitioning and sympatric differentiation among closely related bacterioplankton
-
Hunt DE, David LA, Gevers D, Preheim SP, Alm EJ, Polz MF. (2008). Resource partitioning and sympatric differentiation among closely related bacterioplankton. Science 320: 1081.
-
(2008)
Science
, vol.320
, pp. 1081
-
-
Hunt, D.E.1
David, L.A.2
Gevers, D.3
Preheim, S.P.4
Alm, E.J.5
Polz, M.F.6
-
21
-
-
1642334899
-
Big questions, small worlds: Microbial model systems in ecology
-
Jessup CM, Kassen R, Forde SE, Kerr B, Buckling A, Rainey PB et al. (2004). Big questions, small worlds: microbial model systems in ecology. Trends Ecol Evol 19: 189-197.
-
(2004)
Trends Ecol Evol
, vol.19
, pp. 189-197
-
-
Jessup, C.M.1
Kassen, R.2
Forde, S.E.3
Kerr, B.4
Buckling, A.5
Rainey, P.B.6
-
22
-
-
0001421004
-
An ecological study of water-filled tree-holes and their position in the woodland ecosystem
-
Kitching RL. (1971). An ecological study of water-filled tree-holes and their position in the woodland ecosystem. J Anim Ecol 40: 281.
-
(1971)
J Anim Ecol
, vol.40
, pp. 281
-
-
Kitching, R.L.1
-
23
-
-
0001857117
-
16S/23S rRNA sequencing
-
Stackebrandt ER, Goodfellow M (eds).John Wiley & Sons: Chichester, UK
-
Lane DL. (1991). 16S/23S rRNA sequencing. In: Stackebrandt ER, Goodfellow M (eds). Nucleic Acid Techniques in Bacterial Systematics. John Wiley & Sons: Chichester, UK, pp 115-175.
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, D.L.1
-
24
-
-
0004170691
-
-
Elsevier Science: Amsterdam, Netherlands
-
Legendre L. (1998). Numerical Ecology. Elsevier Science: Amsterdam, Netherlands.
-
(1998)
Numerical Ecology
-
-
Legendre, L.1
-
25
-
-
26944455121
-
Analyzing beta diversity: Partitioning the spatial variation of community composition data
-
Legendre P, Borcard D, Peres-Neto PR. (2005). Analyzing beta diversity: partitioning the spatial variation of community composition data. Ecol Monogr 75: 435-450.
-
(2005)
Ecol Monogr
, vol.75
, pp. 435-450
-
-
Legendre, P.1
Borcard, D.2
Peres-Neto, P.R.3
-
26
-
-
0030661563
-
Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA
-
Liu WT, Marsh TL, Cheng H, Forney LJ. (1997). Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA. Appl Environ Microbiol 63: 4516-4522.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 4516-4522
-
-
Liu, W.T.1
Marsh, T.L.2
Cheng, H.3
Forney, L.J.4
-
27
-
-
0037225001
-
Evaluation of PCR amplification bias by terminal restriction fragment length polymorphism analysis of small-subunit rRNA and mcrA genes by using defined template mixtures of methanogenic pure cultures and soil DNA extracts
-
Lueders T, Friedrich MW. (2003). Evaluation of PCR amplification bias by terminal restriction fragment length polymorphism analysis of small-subunit rRNA and mcrA genes by using defined template mixtures of methanogenic pure cultures and soil DNA extracts. Appl Environ Microbiol 69: 320-326.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 320-326
-
-
Lueders, T.1
Friedrich, M.W.2
-
28
-
-
0031745941
-
Design and evaluation of useful bacterium-specific PCR primers that amplify genes coding for bacterial 16S rRNA
-
Marchesi JR, Sato T, Weightman AJ, Martin TA, Fry JC, Hiom SJ et al. (1998). Design and evaluation of useful bacterium-specific PCR primers that amplify genes coding for bacterial 16S rRNA. Appl Environ Microbiol 64: 795-799. (Pubitemid 28079862)
-
(1998)
Applied and Environmental Microbiology
, vol.64
, Issue.2
, pp. 795-799
-
-
Marchesi, J.R.1
Sato, T.2
Weightman, A.J.3
Martin, T.A.4
Fry, J.C.5
Hiom, S.J.6
Wade, W.G.7
-
29
-
-
31544448331
-
Microbial biogeography: Putting microorganisms on the map
-
Martiny JBH, Bohannan BJM, Brown JH, Colwell RK, Fuhrman JA, Green JL et al. (2006). Microbial biogeography: putting microorganisms on the map. Nat Rev Microbiol 4: 102-112.
-
(2006)
Nat Rev Microbiol
, vol.4
, pp. 102-112
-
-
Martiny, J.B.H.1
Bohannan, B.J.M.2
Brown, J.H.3
Colwell, R.K.4
Fuhrman, J.A.5
Green, J.L.6
-
30
-
-
49249106204
-
A general framework for the distance-decay of similarity in ecological communities
-
Morlon H, Chuyong G, Condit R, Hubbell S, Kenfack D, Thomas D et al. (2008). A general framework for the distance-decay of similarity in ecological communities. Ecol Lett 11: 904.
-
(2008)
Ecol Lett
, vol.11
, pp. 904
-
-
Morlon, H.1
Chuyong, G.2
Condit, R.3
Hubbell, S.4
Kenfack, D.5
Thomas, D.6
-
31
-
-
0033404204
-
The distance decay of similarity in biogeography and ecology
-
Nekola JC, White PS. (1999). The distance decay of similarity in biogeography and ecology. J Biogeogr 26: 867-878.
-
(1999)
J Biogeogr
, vol.26
, pp. 867-878
-
-
Nekola, J.C.1
White, P.S.2
-
32
-
-
43349092723
-
-
R package version1.15-1 http://vegan.r-forge.r-project.org/
-
Oksanen J, Kindt R, Legendre P, O'Hara B, Simpson BH, Solymos P et al. (2008). Vegan: community ecology package. R package version 1.15-1 http://cran.r-project. org/, http://vegan.r-forge.r-project.org/.
-
(2008)
Vegan: Community Ecology Package
-
-
Oksanen, J.1
Kindt, R.2
Legendre, P.3
O'Hara, B.4
Simpson, B.H.5
Solymos, P.6
-
33
-
-
33846914243
-
Global patterns of diversity and community structure in marine bacterioplankton
-
Pommier T, Canback B, Riemann L, Bostrom KH, Simu K, Lundberg P et al. (2007). Global patterns of diversity and community structure in marine bacterioplankton. Mol Ecol 16: 867-880.
-
(2007)
Mol Ecol
, vol.16
, pp. 867-880
-
-
Pommier, T.1
Canback, B.2
Riemann, L.3
Bostrom, K.H.4
Simu, K.5
Lundberg, P.6
-
34
-
-
33847318761
-
Multiscale responses of microbial life to spatial distance and environmental heterogeneity in a patchy ecosystem
-
Ramette A, Tiedje JM. (2007). Multiscale responses of microbial life to spatial distance and environmental heterogeneity in a patchy ecosystem. Proc Natl Acad Sci USA 104: 2761.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 2761
-
-
Ramette, A.1
Tiedje, J.M.2
-
35
-
-
64149130723
-
Bacterial'cosmopolitanism'and importance of local environmental factors for community composition in remote highaltitude lakes
-
Sommaruga R, Casamayor EO. (2009). Bacterial'cosmopolitanism'and importance of local environmental factors for community composition in remote highaltitude lakes. Freshw Biol 54: 994-1005.
-
(2009)
Freshw Biol
, vol.54
, pp. 994-1005
-
-
Sommaruga, R.1
Casamayor, E.O.2
-
36
-
-
3042690870
-
Are natural microcosms useful model systems for ecology?
-
Srivastava DS, Kolasa J, Bengtsson J, Gonzalez A, Lawler SP, Miller TE et al. (2004). Are natural microcosms useful model systems for ecology? Trends Ecol Evol 19: 379-384.
-
(2004)
Trends Ecol Evol
, vol.19
, pp. 379-384
-
-
Srivastava, D.S.1
Kolasa, J.2
Bengtsson, J.3
Gonzalez, A.4
Lawler, S.P.5
Miller, T.E.6
-
37
-
-
0031669104
-
Why more productive sites have more species: An experimental test of theory using tree-hole communities
-
Srivastava DS, Lawton JH. (1998). Why more productive sites have more species: an experimental test of theory using tree-hole communities. Am Nat 152: 510-529.
-
(1998)
Am Nat
, vol.152
, pp. 510-529
-
-
Srivastava, D.S.1
Lawton, J.H.2
-
38
-
-
40349087151
-
Predicting prokaryotic ecological niches using genome sequence analysis
-
Suen G, Goldman BS, Welch RD. (2007). Predicting prokaryotic ecological niches using genome sequence analysis. PLoS ONE 2: e743.
-
(2007)
PLoS ONE
, vol.2
-
-
Suen, G.1
Goldman, B.S.2
Welch, R.D.3
-
39
-
-
38049100699
-
The power of species sorting: Local factors drive bacterial community composition over a wide range of spatial scales
-
Van der Gucht K, Cottenie K, Muylaert K, Vloemans N, Cousin S, Declerck S et al. (2007). The power of species sorting: Local factors drive bacterial community composition over a wide range of spatial scales. Proc Natl Acad Sci USA 104: 20404.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 20404
-
-
Van Der Gucht, K.1
Cottenie, K.2
Muylaert, K.3
Vloemans, N.4
Cousin, S.5
Declerck, S.6
-
40
-
-
68949202404
-
Local adaptation of bacteriophages to their bacterial hosts in soil
-
Vos M, Birkett PJ, Birch E, Griffiths RI, Buckling A. (2009). Local adaptation of bacteriophages to their bacterial hosts in soil. Science 325: 833.
-
(2009)
Science
, vol.325
, pp. 833
-
-
Vos, M.1
Birkett, P.J.2
Birch, E.3
Griffiths, R.I.4
Buckling, A.5
-
41
-
-
0042242559
-
Geographic barriers isolate endemic populations of hyperthermophilic archaea
-
Whitaker RJ, Grogan DW, Taylor JW. (2003). Geographic barriers isolate endemic populations of hyperthermophilic archaea. Science 301: 976-978.
-
(2003)
Science
, vol.301
, pp. 976-978
-
-
Whitaker, R.J.1
Grogan, D.W.2
Taylor, J.W.3
-
42
-
-
35348949524
-
Neutral assembly of bacterial communities
-
Woodcock S, van der Gast CJ, Bell T, Lunn M, Curtis TP, Head IM et al. (2007). Neutral assembly of bacterial communities. FEMS Microbiol Ecol 62: 171-180.
-
(2007)
FEMS Microbiol Ecol
, vol.62
, pp. 171-180
-
-
Woodcock, S.1
Van Der Gast, C.J.2
Bell, T.3
Lunn, M.4
Curtis, T.P.5
Head, I.M.6
|