Phylogenetic relationships in genus Geopora (Pyronemataceae, Pezizales)

Mycological Progress

Volumn 9, Issue 4, 2010, Pages 509-522

  Tamm, H ^a   Poldmaa K ^a,b   Kullman, B ^c  

^a UNIVERSITY OF TARTU   (Estonia)

^b University of Tartu Natural History Museum   (Estonia)

^c ESTONIAN UNIVERSITY OF LIFE SCIENCES   (Estonia)

Author keywords

Ascomycota; Molecular phylogenetics; Ploidy level; Species delimitation

Indexed keywords

ARENICOLA; ASCOMYCOTA; GEOPORA; GEOPORA SEPULTA; PEZIZALES; PYRONEMATACEAE;

EID: 77958462507     PISSN: 1617416X     EISSN: 18618952     Source Type: Journal    
DOI: 10.1007/s11557-010-0659-4     Document Type: Article

References (51)

1. Ahmad S (1978) Ascomycetes of Pakistan. Part 1. Biological Society of Pakistan, Lahore. Monograph No. 7.
2. Bidartondo MI, Baar J, Bruns TD (2001) Low ectomycorrhizal inoculum potential anddiversity from soils in and near ancient forests of bristlecone pine (Pinus longaeva). Can J Bot 79: 293-299. doi: 10. 1139/cjb-79-3-293.
3. Bidartondo MI, Burghardt B, Gebauer G, Bruns TD, Read DJ (2004) Changing partners in the dark: isotopic and molecular evidence of ectomycorrhizal liaisons between forest orchids and trees. Proc R Soc Lond B 271: 1799-1806. doi: 10. 1098/rspb. 2004. 2807.
4. Bois G, Piché Y, Fung MYP, Khasa DP (2005) Mycorrhizal inoculum potentials of pure reclamation materials and revegetated tailing sands from the Canadian oil sand industry. Mycorrhiza 15: 149-158. doi: 10. 1007/s00572-004-0315-4.
5. Burdsall HH Jr (1965) Operculate asci and puffing of ascospores in Geopora (Tuberales). Mycologia 57: 485-487.
6. Burdsall HH Jr (1968) A revision of the genus Hydnocystis (Tuberales) and of the hypogeous species of Geopora (Pezizales). Mycologia 60: 496-525.
7. Cooke MC (1876) Mycographia, seu icones fungorum, 1: 45-86. Williams & Norgate, London.
8. Dennis RWG (1968) British ascomycetes, 2nd edn. Cramer, London.
9. Dissing H (2000) Pezizales. In: Hansen L, Knudsen H (eds) Nordic Macromycetes 1: 55-128. Nordsvamp, Copenhagen.
10. El Karkouri K, Martin F, Mousain D (2004) Diversity of ectomycorrhizal symbionts in a disturbed Pinus halepensis plantation in the Mediterranean region. Ann For Sci 61: 705-710.
11. Fries EM (1851) Novarum Symbolarum Mycologicarum Mantissa. Acta Reg Soc Sci Upps Ser 3. 1: 225-231.
12. Fuckel L (1866) Fungi Rhenani exsiccati. Cent. 12-17, No. 1101-1700. Hedwigia 5: 14-16.
13. Fujimura KE, Smith JE, Horton TR, Weber NS, Spatafora JW (2005) Pezizalean mycorrhizas and sporocarps in ponderosa pine (Pinus ponderosa) after prescribed fires in eastern Oregon, USA. Mycorrhiza 15: 79-86.
14. Gardes M, Bruns TD (1993) ITS primers with enhanced specificity for basidiomycetes-application to the identification of mycorrhizae and rusts. Mol Ecol 2: 113-118.
15. Gehring CA, Theimer TC, Whitham TG, Keim P (1998) Ectomycorrhizal fungal community structure of pinyon pines growing in two environmental extremes. Ecology 79: 1562-1572.
16. Hansen K, Pfister DH, Hibbett DS (1999) Phylogenetic relationships among species of Phillipsia inferred from molecular and morphological data. Mycologia 91: 299-314.
17. Hansen K, Læssøe T, Pfister DH (2002) Phylogenetic diversity in the core group of Peziza inferred from ITS sequences and morphology. Mycol Res 106: 879-902.
18. Harkness HW (1885) Fungi of the Pacific Coast. Bull Calif Acad Sci 1: 159-176.
19. Huelsenbeck JP, Ronquist F (2001) MRBAYES: Bayesian inference of phylogeny. Bioinformatics 17: 754-755.
20. Kaldorf M, Renker C, Fladung M, Buscot F (2004) Characterization and spatial distribution of ectomycorrhizas colonizing aspen clones released in an experimental field. Mycorrhiza 14: 295-306. doi: 10. 1007/s00572-003-0266-1.
21. Katoh K, Misawa K, Kuma K, Miyata T (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res 30: 3059-3066.
22. Kers LE (1974) The Swedish Geoporae and their pyrenomycete infections. Svensk Bot Tidskr 68: 344-354.
23. Kullman B (1998) Two sibling species of the genus Byssonectria (Pezizales). Suppression of spore development under environmental stress. Mycotaxon 69: 199-207.
24. Kullman B (2002) Nuclear DNA content, life cycle and ploidy in two Neottiella species (Pezizales, Ascomycetes). Persoonia 18: 103-115.
25. Kullman B, Teterin W (2006) Estimation of fungal genome size: comparison of image cytometry and photometric cytometry. Folia Cryptogam Est 42: 43-56.
26. Læssøe T, Hansen K (2007) Truffle trouble: what happened to the Tuberales? Mycol Res 111: 1075-1099.
27. Lumbsch HT, Huhndorf SM (eds) (2007) Outline of Ascomycota-2007. Myconet 13: 1-58.
28. Maia LC, Yano AM, Kimbrough JW (1996) Species of Ascomycota forming ectomycorrhizae. Mycotaxon 57: 371-390.
29. Massee G (1895) British fungus flora. A classified text-book of mycology, vol 4. George Bell, London.
30. Mueller RC, Gehring CA (2006) Interactions between an above-ground plant parasite and below-ground ectomycorrhizal fungal communities on pinyon pine. J Ecol 94: 276-284.
31. Nannfeldt JA (1941) Sepultaria arenicola (Lév.) Massee. In: Lundell S, Nannfeldt JA (Eds) Fungi exsiccati Suecici, praesertim Upsaliensis No. 958. Uppsala.
32. Nara K, Nakaya H, Wu B, Zhou Z, Hogetsu T (2003) Underground primary succession of ectomycorrhizal fungi in a volcanic desert on Mount Fuji. New Phytol 159: 743-756.
33. Nylander JAA (2004) MRMODELTEST 2. 2. Evolutionary Biology Centre, Uppsala University, Uppsala.
34. Parádi I, Baar J (2006) Mycorrhizal fungal diversity in willow forests of different age along the river Waal, The Netherlands. For Ecol Manag 237: 366-372. doi: 10. 1016/j. foreco. 2006. 09. 059.
35. Perry BA, Hansen K, Pfister DH (2007) A phylogenetic overview of the family Pyronemataceae (Ascomycota, Pezizales). Mycol Res 111: 549-571.
36. Phillips W (1887) A manual of the British discomycetes. Kegan Paul, Trench, London.
37. Rambaut A (1996) Se-Al: Sequence Alignment Editor http://evolve. zoo. ox. ac. uk.
38. Rincón A, De Felipe MR, Fernández-Pascual M (2007) Inoculation of Pinus halepensis Mill. with selected ectomycorrhizal fungi improves seedling establishment 2 years after planting in a degraded gypsum soil. Mycorrhiza 18: 23-32.
39. Ronquist F, Huelsenbeck JP (2003) MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
40. Schumacher T (1979) Notes on taxonomy, ecology, and distribution of operculate discomycetes (Pezizales) from river banks in Norway. Norw J Bot 26: 53-83.
41. Seaver FJ (1928) The North American cup-fungi (Operculates). Seaver, New York.
42. Selosse MA, Faccio A, Scappaticci G, Bonfante P (2004) Chlorophyllous and achlorophyllous specimens of Epipactis microphylla (Neottieae, Orchidaceae) are associated with ectomycorrhizal septomycetes, including truffles. Microb Ecol 47: 416-426. doi: 10. 1007/s00248-003-2034-3.
43. Shefferson RP, Kull T, Tali K (2008) Mycorrhizal interactions of orchids colonizing Estonian mine tailings hills. Am J Bot 95: 156-164.
44. Smith ME, Douhan GW, Rizzo DM (2007) Ectomycorrhizal community structure in a xeric Quercus woodland based on rDNA sequence analysis of sporocarps and pooled roots. New Phytol 174: 847-863.
45. Swofford DL (2003) PAUP*. Phylogenetic analysis using parsimony (*and other methods) Version 4. 0b10. Sinauer, Sunderland.
46. Tedersoo L, Kõljalg U, Hallenberg N, Larsson KH (2003) Fine scale distribution of ectomycorrhizal fungi and roots across substrate layers including coarse woody debris in a mixed forest. New Phytol 159: 153-165.
47. Tedersoo L, Hansen K, Perry BA, Kjøller R (2006) Molecular and morphological diversity of pezizalean ectomycorrhiza. New Phytol 170: 581-596.
48. Yao YJ, Spooner BM (1996a) Notes on British species of Geopora. Mycol Res 100: 72-74.
49. Yao YJ, Spooner BM (1996b) Geopora sepulta (Pezizales) in Britain, with a key to British species of the genus. Kew Bull 51: 381-383.
50. Yao YJ, Spooner BM (2003) The occurrence of Geopora arenosa in the British Isles. Kew Bull 58: 247-252.
51. Ypsilos IK, Magan N (2005) Characterisation of optimum cultural environmental conditions for the production of high numbers of Metarhizium anisopliae blastospores with enhanced ecological fitness. Biocontrol Sci Technol 15: 683-699.